BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	984361 =	NA (NA)	3 (0.030)	3/164	NT	NA	noncoding (1/98 nt)	RIP86 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP86 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	1816215 =	NA (NA)	3 (0.030)	3/164	NT	NA	noncoding (31/189 nt)	RIP129 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP129 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site

Only 100 of 111 total aligned reads displayed.

AATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCG  >  NC_000913/1816116‑1816314

 aTTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                                                     <  1:926193/100‑1 (MQ=255)

        cctgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAc                                                                                              >  1:2839/1‑100 (MQ=255)

        cctgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAc                                                                                              >  1:1028295/1‑100 (MQ=255)

        cctgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAc                                                                                              <  2:1273125/100‑1 (MQ=255)

         ctgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaaaa                                                                                               <  1:1224247/98‑1 (MQ=255)

          tgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAc                                                                                              >  2:1307222/1‑98 (MQ=255)

          tgATGGGAGGCAGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACt‑g                                                                                           >  2:807290/1‑100 (MQ=255)

           gATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACt‑gt                                                                                          >  2:1673559/1‑100 (MQ=255)

            aTGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACt‑gtg                                                                                         <  1:2374591/100‑1 (MQ=255)

            aTGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACt‑gtg                                                                                         <  1:1172952/100‑1 (MQ=255)

             tGGGAGGCGGCGCAATTGCGCTGCCGCAAATGATTTTCATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGc                                                                                        <  2:865958/100‑1 (MQ=255)

             tGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGc                                                                                        <  2:803970/100‑1 (MQ=255)

              ttgAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCa                                                                                       >  2:1592914/3‑100 (MQ=255)

                gAGGCGGCGCAATTGCGCCGCCTCAAATGATATACATAGTGCGCCTTGTTTATGCCGGAAGCCGCGTGAACGCCTTATCCGGCCTACAAAACA‑GTGCaaa                                                                                     >  2:860017/1‑100 (MQ=25)

                  ggcggcGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAAtt                                                                                   >  1:1689144/1‑100 (MQ=255)

                  ggcggcGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAAtt                                                                                   <  1:1132197/100‑1 (MQ=255)

                   gcggcgCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAAttn                                                                                  <  2:25883/100‑2 (MQ=255)

                      gcgcAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAat                                                                               <  2:1968577/100‑1 (MQ=255)

                      gcgcAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAat                                                                               <  1:428020/100‑1 (MQ=255)

                      gcgcAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAat                                                                               <  1:428559/100‑1 (MQ=255)

                      gcgcAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAat                                                                               >  1:1830477/1‑100 (MQ=255)

                       cgcAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAata                                                                              <  1:2388363/100‑1 (MQ=255)

                         cAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAatata                                                                            <  2:1796098/100‑1 (MQ=255)

                          aaTTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAatatat                                                                           <  2:1830546/100‑1 (MQ=255)

                           aTTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATAtt                                                                          >  2:924142/1‑100 (MQ=255)

                            ttGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTg                                                                         <  1:913290/100‑1 (MQ=255)

                            ttGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTg                                                                         <  1:1592921/100‑1 (MQ=255)

                               cgccgcCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAg                                                                      <  2:1789267/100‑1 (MQ=255)

                               cgccgcCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAg                                                                      >  2:2708179/1‑100 (MQ=255)

                               cgccgcCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAg                                                                      <  1:1719305/100‑1 (MQ=255)

                               cgccgcCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAg                                                                      >  2:23353/1‑100 (MQ=255)

                                gccgccTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAgg                                                                     >  1:1453868/1‑100 (MQ=255)

                                gccgccTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAgg                                                                     <  1:751497/100‑1 (MQ=255)

                                   gccTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACCAAACT‑GTGCAAATTCAATAGATTGCAGGaa                                                                   <  2:1179684/99‑1 (MQ=255)

                                   gccTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGaaa                                                                  >  1:1073415/1‑100 (MQ=255)

                                    ccTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAac                                                                 <  1:2427720/100‑1 (MQ=255)

                                     cTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAaca                                                                <  2:2323638/100‑1 (MQ=255)

                                     cTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAaca                                                                >  1:2157152/1‑100 (MQ=255)

                                        aaaTGATTTAAATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGt                                                             >  2:1936397/1‑100 (MQ=255)

                                         aaTGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTa                                                            <  2:1975863/100‑1 (MQ=255)

                                          aTGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAg                                                           <  1:2688239/100‑1 (MQ=255)

                                            gATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGc                                                         <  1:1993983/100‑1 (MQ=255)

                                             aTTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTATAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGcc                                                        >  2:1930666/1‑100 (MQ=255)

                                             aTTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGcc                                                        >  1:456058/1‑100 (MQ=255)

                                             aTTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGcc                                                        <  1:896342/100‑1 (MQ=255)

                                              tttACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCt                                                       >  2:790233/1‑100 (MQ=255)

                                              tttACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCt                                                       >  1:872103/1‑100 (MQ=255)

                                               ttACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTg                                                      >  2:762372/1‑100 (MQ=255)

                                                tACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGa                                                     <  1:2005097/100‑1 (MQ=255)

                                                  cATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAAGGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATa                                                   <  1:1930675/100‑1 (MQ=255)

                                                  cATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATa                                                   >  2:295335/1‑100 (MQ=255)

                                                  cATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATa                                                   <  1:2658506/100‑1 (MQ=255)

                                                    tAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaag                                                 <  1:1635619/100‑1 (MQ=255)

                                                    tAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaag                                                 <  2:2170409/100‑1 (MQ=255)

                                                    tAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaag                                                 >  2:1508598/1‑100 (MQ=255)

                                                     aGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGAtgcgc                                                <  2:2526388/100‑5 (MQ=255)

                                                     aGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagc                                                >  1:2144275/1‑100 (MQ=255)

                                                     aGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagc                                                <  2:323221/100‑1 (MQ=255)

                                                         cgcTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagcgaag                                            >  1:1716640/1‑100 (MQ=255)

                                                           cTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagcgaagcg                                          >  1:1992781/1‑100 (MQ=255)

                                                            ttttttTATGCCGTATGCGGCATGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATaagcgaag                                            <  2:2278379/97‑1 (MQ=255)

                                                               gTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATc                                      >  2:849128/1‑100 (MQ=255)

                                                               gTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATc                                      <  2:1885290/100‑1 (MQ=255)

                                                                tttATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCa                                     <  2:2625362/100‑1 (MQ=255)

                                                                 gtaggccggataaggcgttcacgccgcatccggcCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAg                                    >  1:1644102‑M2/35‑100 (MQ=255)

                                                                  tATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAgg                                   <  2:1091968/100‑1 (MQ=255)

                                                                   aTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGc                                  >  1:1915003/1‑100 (MQ=255)

                                                                    tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCAGG‑ACCATGTAGGCCTGATGCGCTACGCTTATCAGGcc                                 <  2:2215482/100‑2 (MQ=17)

                                                                    ggccggataaggcgttcacgccgcatccggcCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCa                                 >  1:308692‑M2/32‑100 (MQ=255)

                                                                     gccggataaggcgttcacgccgcatccggcCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAg                                >  2:2715587‑M2/31‑100 (MQ=255)

                                                                      cctgATGCGGCGTAAACGACTTACCAGGCCTACAAAATC‑GTCCAAATTCAATATATTGCAAGGACTGCGTAGGCCTGATACGCTATGCCGATCAGGccta                               <  1:420040/97‑4 (MQ=21)

                                                                      ccGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGt                               >  1:964893/1‑100 (MQ=255)

                                                                        ggATGCGGCGTGACCGCCTTATCCGGCGTACAAAACT‑GTGCCAATTCAATATATTGCAGGAAACTCGTAGGCCTGATAAGCGAAGCGCATCAGGCAGtt                              <  2:408325/99‑1 (MQ=17)

                                                                         gATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGtttt                            <  1:870129/100‑1 (MQ=255)

                                                                           tGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGc                          >  1:2207763/1‑100 (MQ=255)

                                                                           tGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGc                          <  1:1065773/100‑1 (MQ=255)

                                                                            gcggcgTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCg                         <  1:1124739/100‑1 (MQ=255)

                                                                             cggcgTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGt                        <  2:1689137/100‑1 (MQ=255)

                                                                             cggcgTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGt                        >  1:443488/1‑100 (MQ=255)

                                                                             cggcgTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGt                        <  1:2229081/100‑1 (MQ=255)

                                                                              ggcgTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGtt                       <  2:2123635/100‑1 (MQ=255)

                                                                              ggcgTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGtt                       >  2:129961/1‑100 (MQ=255)

                                                                               gcgTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGttt                      >  1:2697412/1‑100 (MQ=255)

                                                                                cgTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTg                     <  1:1458008/100‑1 (MQ=255)

                                                                                cgTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTg                     <  1:1614667/100‑1 (MQ=255)

                                                                                cgTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTg                     <  2:1556377/100‑1 (MQ=255)

                                                                                cgTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTg                     <  1:1270137/100‑1 (MQ=255)

                                                                                  tGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTc                   <  1:2133989/100‑1 (MQ=255)

                                                                                  tGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTc                   <  1:2550512/100‑1 (MQ=255)

                                                                                   gAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTca                  >  2:2323342/1‑100 (MQ=255)

                                                                                       gCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTcagcag              >  2:842776/1‑100 (MQ=255)

                                                                                        ccTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGt             >  1:2452005/1‑100 (MQ=255)

                                                                                         cTTATCCGGCCTACCAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGtc            <  2:2377694/100‑1 (MQ=255)

                                                                                         cTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTATGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGtc            <  1:1744716/100‑1 (MQ=255)

                                                                                         cTTAGCCGGACTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGtc            <  1:2173506/100‑1 (MQ=255)

                                                                                           tATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGtctc          >  2:2627237/1‑100 (MQ=255)

                                                                                            atccggcCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCa         <  1:386716‑M2/93‑1 (MQ=255)

                                                                                            atccggcCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCa         <  2:292130‑M2/93‑1 (MQ=255)

                                                                                              ccggcCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGGGCATCAGGCAGTTTTGCGTTGGTCAGCAGTCTCAAg       >  2:1019446‑M2/6‑100 (MQ=255)

                                                                                                   cTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAgcggcg  >  2:2041683/1‑100 (MQ=255)

AATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACT‑GTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCG  >  NC_000913/1816116‑1816314

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.