BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3231252 =	NA (NA)	8 (0.090)	5/164	NT	NA	noncoding (1/283 nt)	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences
*	?	NC_000913	3231282 =	NA (NA)	8 (0.090)	5/164	NT	NA	noncoding (31/283 nt)	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 165 total aligned reads displayed.

TCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCC  >  NC_000913/3231183‑3231381

tcCTGGAGTGCCGCGCATTTGTATATGTTGTATAACTATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGccc                                                                                                     <  2:335518/100‑1 (MQ=255)

tcCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGccc                                                                                                     >  2:46739/1‑100 (MQ=255)

 ccTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCt                                                                                                    >  1:251075/1‑100 (MQ=255)

  ggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggcaaggaggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCGccc                                                                                                     >  2:697021‑M1/68‑98 (MQ=255)

  cTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTa                                                                                                   <  2:1099228/100‑1 (MQ=255)

    ggAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                                                 >  1:1916447/1‑100 (MQ=255)

    ggAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                                                 >  1:2457895/1‑100 (MQ=255)

    ggAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                                                 >  1:1416780/1‑100 (MQ=255)

       gTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgt                                                                                              >  2:2543404/1‑100 (MQ=255)

         gCCGGGCATGTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTAGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAGGTGc                                                                                            <  2:72504/100‑1 (MQ=38)

         gCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGc                                                                                            <  2:1783346/100‑1 (MQ=255)

            gcgcATTTGTATATGTTGTATAACGATTTTTTCCGTATGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAt                                                                                         >  2:832569/1‑100 (MQ=255)

              gcATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAtcc                                                                                       <  2:1831350/100‑1 (MQ=255)

               cATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAtcct                                                                                      >  1:2670993/1‑100 (MQ=255)

               cATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATACGGCGTAAACGCCTTATCCGCCCTCCATGTGCAAtcct                                                                                      <  2:1695211/100‑1 (MQ=255)

                 tttGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAtcctcc                                                                                    <  2:2223376/100‑1 (MQ=255)

                  ttGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATcctcct                                                                                   <  1:2002426/100‑1 (MQ=255)

                   tGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTg                                                                                  <  2:2608129/100‑1 (MQ=255)

                   tGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTg                                                                                  <  1:1922493/100‑1 (MQ=255)

                   tGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTg                                                                                  <  2:369142/100‑1 (MQ=255)

                       tatGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCg                                                                              <  2:1644915/100‑1 (MQ=255)

                        atGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCgg                                                                             >  2:1337899/1‑100 (MQ=255)

                        atGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTACTGGCGGATGCGGCGTAAACGACTTATCAGCCCTACATGTGCAACCATCCTGGcc                                                                               >  2:2367964/1‑98 (MQ=37)

                         tgttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGa                                                                            >  1:1993918/1‑100 (MQ=255)

                         tgttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGa                                                                            >  1:1275721/1‑100 (MQ=255)

                          gttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGAt                                                                           <  1:1775776/100‑1 (MQ=255)

                          gttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGAt                                                                           >  1:1509062/1‑100 (MQ=255)

                          gttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGAt                                                                           <  2:2067494/100‑1 (MQ=255)

                           ttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATa                                                                          <  1:1454071/100‑1 (MQ=255)

                            tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATaa                                                                         >  1:2334858/1‑100 (MQ=255)

                             gtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATaaa                                                                        >  1:27616/1‑100 (MQ=255)

                              tataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATaaaa                                                                       >  1:2175031/1‑100 (MQ=255)

                              tataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATaa                                                                         >  2:2485593/1‑98 (MQ=255)

                               ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAc                                                                      <  1:2393542/100‑1 (MQ=255)

                               ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAc                                                                      >  1:973211/1‑100 (MQ=255)

                                taACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAcg                                                                     >  1:732261/1‑100 (MQ=255)

                                 aaCGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAcgc                                                                    <  2:176544/100‑1 (MQ=255)

                                  aCGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAcgcg                                                                   >  2:1737538/1‑100 (MQ=255)

                                  aCGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAcgcg                                                                   <  2:1585148/100‑1 (MQ=255)

                                  aCGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCAGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAagcg                                                                   >  1:1795697/1‑100 (MQ=255)

                                    gATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGc                                                                 <  2:2711898/100‑1 (MQ=255)

                                       tttttCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAg                                                              >  1:1494999/1‑100 (MQ=255)

                                         tttCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCg                                                            <  2:1838554/100‑1 (MQ=255)

                                            ccGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTg                                                         <  2:1437393/100‑1 (MQ=255)

                                              gTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCa                                                       >  2:746362/1‑100 (MQ=255)

                                              gTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCa                                                       >  1:121984/1‑100 (MQ=255)

                                                 aGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATcc                                                    <  1:2211177/100‑1 (MQ=255)

                                                 aGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATcc                                                    >  1:776874/1‑100 (MQ=255)

                                                 aGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATcc                                                    >  2:136990/1‑100 (MQ=255)

                                                  gCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCg                                                   >  1:873811/1‑100 (MQ=255)

                                                   cAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCgg                                                  >  2:1500803/1‑100 (MQ=255)

                                                    aataatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGc                                                 <  2:1981651/100‑1 (MQ=255)

                                                    aataatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGc                                                 <  1:1055359/100‑1 (MQ=255)

                                                    aataatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGc                                                 <  2:668129/100‑1 (MQ=255)

                                                     ataatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCa                                                <  2:749753/100‑1 (MQ=255)

                                                         tttGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTg                                            >  1:1079927/1‑100 (MQ=255)

                                                         tttGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTg                                            >  1:1830646/1‑100 (MQ=255)

                                                          ttGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGc                                           <  1:1981651/100‑1 (MQ=255)

                                                          ttGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAGGTGCAAGCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACt                                             <  1:861648/98‑1 (MQ=255)

                                                           tGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCa                                          >  1:1003062/1‑100 (MQ=255)

                                                            gCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCAc                                         >  1:2729123/1‑100 (MQ=255)

                                                             cAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCTGGATAAAACGCGGCAAGCGTTGCATCCGGCGACTGCAc                                         >  2:380778/1‑99 (MQ=255)

                                                                ctgctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACcgcg                                     <  1:707888/100‑1 (MQ=255)

                                                                   ctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCa                                  >  1:2524758/1‑100 (MQ=255)

                                                                    gggcggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTTGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGcc                                   >  2:697021‑M2/32‑98 (MQ=255)

                                                                     GGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACt                                <  2:2475985‑M1/100‑1 (MQ=255)

                                                                      gcggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTg                               >  1:2300882‑M2/30‑100 (MQ=255)

                                                                      GCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTg                               <  2:1106930‑M1/100‑1 (MQ=255)

                                                                       cggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTgg                              >  1:1733695‑M2/29‑100 (MQ=255)

                                                                        ggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGc                             >  2:1301324‑M2/28‑100 (MQ=255)

                                                                        ggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGc                             >  2:416253‑M2/28‑100 (MQ=255)

                                                                         gataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCg                            >  1:2722108‑M2/27‑100 (MQ=255)

                                                                         GATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCg                            >  2:2154545‑M1/1‑100 (MQ=255)

                                                                         GATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCg                            >  1:2266361‑M1/1‑100 (MQ=255)

                                                                          ATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCgg                           >  1:2025922‑M1/1‑100 (MQ=255)

                                                                            gcggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGAt                         >  2:2006754/1‑100 (MQ=255)

                                                                            gcggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGAt                         <  1:413032/100‑1 (MQ=255)

                                                                             cggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATg                        >  2:2225305/1‑100 (MQ=255)

                                                                             cggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATg                        >  1:1197174/1‑100 (MQ=255)

                                                                              ggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGGTGCATCCGGCAACTCCACCGCGCCACTGGCGGa                          >  2:941644/1‑97 (MQ=255)

                                                                                cgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATgcgg                     <  1:605470/100‑1 (MQ=255)

                                                                                cgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATgcgg                     >  2:349858/1‑100 (MQ=255)

                                                                                cgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATgcg                      <  2:1529085/99‑1 (MQ=255)

                                                                                 gTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATgcggc                    <  2:988671/100‑1 (MQ=255)

                                                                                 gTAAACGCCTTATCCGCCCTACATGTGCAAGCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATgcggc                    <  1:1798646/100‑1 (MQ=255)

                                                                                   aaaCGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGt                  <  1:1253918/100‑1 (MQ=255)

                                                                                      cGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGCCGGCTGCGGCGTGa                >  2:889781/1‑99 (MQ=255)

                                                                                        ccTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACg             <  2:1454778/100‑1 (MQ=255)

                                                                                        ccTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACg             <  2:1416774/100‑1 (MQ=255)

                                                                                        ccTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACg             <  1:848998/100‑1 (MQ=255)

                                                                                        ccTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACg             >  1:1335598/1‑100 (MQ=255)

                                                                                         cTTATCCGCCCTACATGTGCAATACTACTGGCCGGATAAAACGCGGCAAGCGTTGCATCAGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGc            >  2:536503/1‑100 (MQ=255)

                                                                                          ttATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGcc           <  1:2055419/100‑1 (MQ=255)

                                                                                           tATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCt          >  2:1204002/1‑100 (MQ=255)

                                                                                           tATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCt          <  1:1876864/100‑1 (MQ=255)

                                                                                           tATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCAGCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGcc           <  2:1073318/99‑1 (MQ=255)

                                                                                             tccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTa        <  1:950182‑M2/94‑1 (MQ=255)

                                                                                              ccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTAt       >  1:1692631‑M2/6‑100 (MQ=255)

                                                                                               cgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGTCGGATGCGGCGTGAACGCCTTATc      >  2:544455‑M2/5‑100 (MQ=255)

                                                                                               cgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc      >  1:1414624‑M2/5‑100 (MQ=255)

TCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCC  >  NC_000913/3231183‑3231381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.