BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,706,048	0	G	T	26.7%	238.7 / 82.6	101	intergenic (‑258/+50)	dppB/dppA	dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor
Reads supporting (aligned to +/- strand): ref base G (30/44); new base T (26/1); total (56/45)
Fisher's exact test for biased strand distribution p-value = 1.59e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.54e-01

Only 100 of 105 total aligned reads displayed.

GCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACCA  >  NC_000913/3705950‑3706147

gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGa                                                                                                    <  2:891177/100‑1 (MQ=255)

 cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAg                                                                                                   >  2:390365/1‑100 (MQ=255)

 cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAg                                                                                                   >  2:640628/1‑100 (MQ=255)

  gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAgc                                                                                                  >  2:489267/1‑100 (MQ=255)

  gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAgc                                                                                                  >  2:758227/1‑100 (MQ=255)

   cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAgcg                                                                                                 <  1:71052/100‑1 (MQ=255)

   cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAgcg                                                                                                 >  1:700163/1‑100 (MQ=255)

   cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAgcg                                                                                                 >  1:1505346/1‑100 (MQ=255)

    tttttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑AC‑C‑AT‑‑‑GTAGGCCTGATAAGCGTAgcgc                                                                                                >  2:968875/10‑100 (MQ=18)

    tttttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑AC‑C‑AT‑‑‑GTAGGCCTGATAAGCGTAgcgc                                                                                                >  2:1238734/10‑100 (MQ=18)

    cttttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GG‑AG‑C‑TGC‑‑GTAGGCCTGATAAGCGTAgcgc                                                                                                >  1:635269/10‑100 (MQ=18)

    actttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑A‑TTG‑‑GTAGGCCTGATAagcgcagcgc                                                                                                >  2:1321513/10‑100 (MQ=18)

     ttttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑T‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCa                                                                                               >  2:1158298/9‑100 (MQ=17)

      tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑AC‑C‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCAt                                                                                              >  2:171610/8‑100 (MQ=18)

       gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATc                                                                                             >  2:26409/1‑100 (MQ=255)

        tgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑C‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATCa                                                                                            >  2:818608/6‑100 (MQ=21)

         gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑T‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg                                                                                           >  2:1493620/5‑100 (MQ=17)

          taggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAACATATTGC‑‑‑A‑AT‑T‑CTCTTGTAGGCCTGATAAGCGTAGCGCATCAgg                                                                                          <  2:150007/97‑1 (MQ=18)

          taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGAT‑CG‑AT‑C‑CAC‑‑ATAGGCCTGATAAGCGTAGCGCATCAgg                                                                                          >  2:453122/4‑100 (MQ=21)

           aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAACATATTGC‑‑‑A‑AT‑T‑CTCTTGTAGGCCTGATAAGCGTAGCGCATCAgga                                                                                         >  1:150005/3‑99 (MQ=18)

           aggCCGGATAAGGCGTTTACGCCCCATCCGGCCTAC‑AGAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑T‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                         >  1:856046/3‑100 (MQ=17)

           aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GG‑CT‑C‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                         >  2:721670/3‑100 (MQ=21)

           aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCATGAAAATTCAATACATTGCA‑AG‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                         >  1:914534/3‑100 (MQ=17)

           aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCA‑GAGAT‑T‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                         >  1:899645/3‑100 (MQ=17)

           aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GG‑AG‑T‑TAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                                                        >  2:312695/3‑100 (MQ=21)

           aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGc                                                                                         <  2:591316/100‑1 (MQ=255)

            ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑C‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                                                        >  1:1579579/2‑100 (MQ=21)

            ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑T‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                                                        >  2:872374/2‑100 (MQ=14)

            ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GG‑AG‑T‑TAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAt                                                                                       >  2:121702/2‑100 (MQ=21)

             gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GA‑AA‑C‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag                                                                                       >  1:1109736/1‑99 (MQ=18)

              ccGGATGCGGCGTGAACGCCTTATCCGGCTTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑A‑TTG‑‑GTAGGCCTGATGCGCTGCGCTTATCAGGc                                                                                         <  1:888948/97‑1 (MQ=21)

                ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑AT‑CCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttgc                                                                                   >  2:1345831/7‑98 (MQ=21)

                ggataaggcgTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑AC‑C‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt                                                                                    >  2:966251/7‑100 (MQ=18)

                ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGCA‑TG‑AG‑C‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt                                                                                    >  2:1039918/7‑100 (MQ=17)

                ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑C‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaattc                                                                                    >  2:1283706/7‑96 (MQ=21)

                ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATAGCTTAAATTCAATATATTGCA‑CC‑AT‑C‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAattc                                                                                    >  2:755889/7‑99 (MQ=18)

                ggataaggcgTTCACGCCGCATCCGACCCAC‑AAAGTCTTGCAAAATCAATAAATTGCAGGA‑AC‑G‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaacta                                                                                    >  2:277332/7‑96 (MQ=25)

                ggATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtttt                                                                                    >  2:611160/1‑100 (MQ=255)

                 gataaggcgTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATCC‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttgcg                                                                                  >  1:874293/6‑97 (MQ=21)

                   tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc                                                                                 >  2:791490/1‑100 (MQ=255)

                   tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc                                                                                 <  2:732153/100‑1 (MQ=255)

                    gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc                                                                                <  2:1157720/100‑1 (MQ=255)

                    gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc                                                                                <  2:1198682/100‑1 (MQ=255)

                     cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct                                                                               >  2:1198339/1‑100 (MQ=255)

                      ggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctt                                                                              >  1:879133/1‑100 (MQ=255)

                      ggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctt                                                                              >  1:1450514/1‑100 (MQ=255)

                          ttAACGGCTTGTCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc                                                                          <  1:1414233/100‑1 (MQ=255)

                          ttAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc                                                                          <  2:1254855/100‑1 (MQ=255)

                            aaCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GC‑AC‑A‑TTC‑‑GTAGGCCTGATACGCGGAGCGCATCAGGCATTTTTCCCTTTGCCa                                                                         >  1:1046750/1‑99 (MQ=18)

                            aaCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCAt                                                                        >  2:1523343/1‑100 (MQ=255)

                             aCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc                                                                       <  1:916981/100‑1 (MQ=255)

                              cGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCa                                                                      <  2:18706/100‑1 (MQ=255)

                               gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg                                                                     >  2:136120/1‑100 (MQ=255)

                                  ttATCCGGCCTAC‑AAAATCGTGCAAATTCGATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCt                                                                  <  2:469238/100‑1 (MQ=255)

                                  ttATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCGTCAGTCt                                                                  <  2:842822/100‑1 (MQ=255)

                                    aTCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg                                                                <  1:390294/100‑1 (MQ=255)

                                    aTCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg                                                                <  2:319287/100‑1 (MQ=255)

                                      ccGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa                                                              <  2:700169/100‑1 (MQ=255)

                                      ccGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa                                                              <  2:1505361/100‑1 (MQ=255)

                                        ggCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATg                                                            >  2:667917/1‑100 (MQ=255)

                                        ggCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATg                                                            <  2:20132/100‑1 (MQ=255)

                                          ccTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCACATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc                                                          <  2:463808/100‑1 (MQ=255)

                                            tAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTTTCTTTGTTTTCAGTCTTGTATGGCtt                                                        >  1:265152/1‑100 (MQ=25)

                                            tAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt                                                        >  2:866561/1‑100 (MQ=255)

                                            tAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt                                                        >  2:1424744/1‑100 (MQ=255)

                                             aC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt                                                       >  2:342448/1‑100 (MQ=255)

                                              c‑AAAATCGTGCACATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt                                                      >  2:1052767/1‑100 (MQ=255)

                                              c‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt                                                      <  1:673738/100‑1 (MQ=255)

                                                 aaaTCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTaa                                                    >  1:1477360/1‑100 (MQ=255)

                                                 aaaTCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTaa                                                    <  1:1424730/100‑1 (MQ=255)

                                                  aaTCGTGCGAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat                                                   <  2:879203/100‑1 (MQ=255)

                                                  aaTCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat                                                   <  2:46447/100‑1 (MQ=255)

                                                   aTCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAatt                                                  <  1:136118/100‑1 (MQ=255)

                                                      gTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattatt                                               <  2:203996/100‑1 (MQ=255)

                                                        gCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg                                             <  2:1157503/100‑1 (MQ=255)

                                                        gCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg                                             >  2:210048/1‑100 (MQ=255)

                                                        gCAAATTCAATACACTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg                                             <  1:1090902/100‑1 (MQ=255)

                                                           aaTTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATa                                          <  1:1575515/100‑1 (MQ=255)

                                                            aTTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag                                         <  1:751745/100‑1 (MQ=255)

                                                              tCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATagag                                       >  2:468682/1‑100 (MQ=255)

                                                              tCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATagag                                       <  1:538281/100‑1 (MQ=255)

                                                               cAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga                                      <  1:793926/100‑1 (MQ=255)

                                                                  tACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGt                                   <  2:877074/100‑1 (MQ=255)

                                                                        ncA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGa                             >  2:827760/2‑100 (MQ=255)

                                                                         cA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa                            >  2:718978/1‑100 (MQ=255)

                                                                         cA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa                            <  1:390362/100‑1 (MQ=255)

                                                                                t‑t‑ttC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGAt                       <  1:758220/100‑1 (MQ=255)

                                                                                  t‑ttC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGAGTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATg                      >  1:755542/1‑100 (MQ=255)

                                                                                           agtccTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc                <  1:836250/97‑1 (MQ=255)

                                                                                           aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc                <  1:1510705/100‑1 (MQ=255)

                                                                                           aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc                <  1:611156/100‑1 (MQ=255)

                                                                                           aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc                <  1:79286/100‑1 (MQ=255)

                                                                                                tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg           <  1:202930/100‑1 (MQ=255)

                                                                                                tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg           <  1:339004/100‑1 (MQ=255)

                                                                                                 gATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATgg          <  1:26408/100‑1 (MQ=255)

                                                                                                    aaGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATc       <  1:791483/100‑1 (MQ=255)

                                                                                                     aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa      >  2:392280/1‑100 (MQ=255)

                                                                                                       cGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAc    >  2:1162531/1‑100 (MQ=255)

                                                                                                        ggAGCGCATCAGGCATTTTTGCCTTTGCCATCAGGCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc   >  2:824103/1‑100 (MQ=255)

                                                                                                         gAGCGCATCAGGCATTTTTTTTTTTTTTTTCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACca  >  1:1554541/1‑100 (MQ=255)

GCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACCA  >  NC_000913/3705950‑3706147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`