| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,531,118 | Δ1 bp | 15.3% | coding (534/1122 nt) | sgcX ← | putative endoglucanase with Zn‑dependent exopeptidase domain |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,531,118 | 0 | T | . | 15.3% | 432.2 / 76.7 | 150 | coding (534/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain |
| Reads supporting (aligned to +/- strand): ref base T (68/59); new base . (14/9); total (82/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.49e-02 | |||||||||||
Only 100 of 159 total aligned reads displayed.
CTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTG > NC_000913/4531019‑4531217 | cTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGt > 2:3155488/1‑100 (MQ=255)cTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGt > 1:1738975/1‑100 (MQ=255) aCCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCtt > 1:1405999/1‑100 (MQ=255) ccGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCttt < 1:2327048/100‑1 (MQ=255) ccGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCttt < 2:513227/100‑1 (MQ=255) gAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTAc > 2:656337/1‑100 (MQ=255) gCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGc < 1:1010852/100‑1 (MQ=255) gCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGc < 2:3518058/100‑1 (MQ=255) gCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGc < 1:1627689/100‑1 (MQ=25) gCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGc < 1:2210957/100‑1 (MQ=25) gCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGc > 1:1421559/1‑100 (MQ=25) gCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGc < 1:267851/100‑1 (MQ=25) ccaccaGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGca < 1:2304064/100‑1 (MQ=255) caccaGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGcac > 2:3138508/1‑100 (MQ=255) caccaGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGccc < 2:3837350/100‑3 (MQ=25) caccaGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGccc < 2:1421550/100‑3 (MQ=25) accaGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGcaca > 2:1987180/1‑100 (MQ=255) ccaGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCacac > 2:3383271/1‑100 (MQ=255) ccaGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGccctg < 1:44808/100‑5 (MQ=21) ccaGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGccctg < 2:1253173/100‑5 (MQ=25) caGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACAcc < 2:1738966/100‑1 (MQ=255) caGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACAcc < 2:2915166/100‑1 (MQ=255) tAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGAt > 1:2521746/1‑100 (MQ=255) tAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGAt > 1:1027226/1‑100 (MQ=255) aaCGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGAt > 2:333875/1‑98 (MQ=255) cGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGtt > 2:3243117/1‑100 (MQ=255) ggCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGttt > 1:3826025/1‑100 (MQ=255) gCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTg < 1:1690746/100‑1 (MQ=255) gCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTg < 1:2365696/100‑1 (MQ=255) gCGATATCAAGCTCCATACTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTg < 2:1113231/100‑1 (MQ=255) cGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGc < 1:893602/100‑1 (MQ=255) tatCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAg < 2:390154/100‑1 (MQ=255) tCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGa > 1:615246/1‑100 (MQ=255) cAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAg < 2:3300660/100‑1 (MQ=255) gCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTg > 1:2099025/1‑100 (MQ=255) cTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTgc > 2:1500046/1‑100 (MQ=255) cTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTgc > 2:1534341/1‑100 (MQ=255) aTAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTgccgcg > 2:2798514/1‑100 (MQ=255) aGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCggg < 2:1409917/100‑1 (MQ=255) aGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCggg > 2:3645862/1‑100 (MQ=255) gTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGt > 2:663595/1‑100 (MQ=255) tACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGtt < 2:289458/100‑1 (MQ=255) attGATAGCATCCGCTACACCGAGCAGGACAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTta > 2:1306682/3‑100 (MQ=255) aCTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTta > 1:558190/1‑100 (MQ=255) gATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATAc < 2:1373228/100‑1 (MQ=255) gATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATAc > 1:329543/1‑100 (MQ=255) atatCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACa < 2:1828816/100‑1 (MQ=255) tAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACGGGATCGTTTGCCAGGAGTTGCGGCGGTCTATACa > 2:374859/1‑99 (MQ=255) aGCATCCGCTACACCGAGCAGGGCAGTACAGC‑ATAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACaga > 2:700310/1‑100 (MQ=255) gCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACagag > 2:3191557/1‑100 (MQ=255) gCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACagag > 2:3463728/1‑100 (MQ=255) cATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACagagn < 2:1488803/100‑2 (MQ=255) cATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGt > 2:3030349/1‑100 (MQ=255) aTCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTg < 1:3296331/100‑1 (MQ=255) ccGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGAc < 2:2325375/100‑1 (MQ=255) gCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAg > 1:3108282/1‑100 (MQ=255) tACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACCGGc > 2:3600965/1‑100 (MQ=255) tACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGc < 1:2481097/100‑1 (MQ=255) acacCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCg < 1:2915484/100‑1 (MQ=255) cacCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGt > 1:2175590/1‑100 (MQ=255) cacCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGt > 2:3824667/1‑100 (MQ=255) ccGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTAc > 2:1687629/1‑100 (MQ=255) tctggtgtgCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGCCCACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTAcc > 1:1372459/9‑100 (MQ=17) gCATGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGAc > 2:734433/1‑100 (MQ=255) gCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGAc > 2:1844347/1‑100 (MQ=255) cAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGAcc < 1:2529134/100‑1 (MQ=255) cAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGAcc < 1:1811309/100‑1 (MQ=255) gtgCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCATTTGCCAGGCGTTGCGGCGGGTCCTTCAGAGCGACAGCCGTACCGACCTg > 2:2548028/3‑100 (MQ=12) gggCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTg < 2:3090790/100‑1 (MQ=255) gggCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTg < 1:1083626/100‑1 (MQ=255) tgCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGa > 1:1918426/2‑100 (MQ=25) ggCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGa > 1:3044748/1‑100 (MQ=255) gCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGaa < 1:497307/100‑1 (MQ=255) gCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGaa > 2:2748188/1‑100 (MQ=25) cggtaaagcacTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAAt > 1:2677546/11‑100 (MQ=37) cagtaaagcacTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAAt > 1:3466815/11‑100 (MQ=37) cagtaaagcacTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAAt > 1:3466816/11‑100 (MQ=37) cAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAAt < 1:1204107/100‑1 (MQ=255) aGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATg > 2:784038/1‑100 (MQ=255) aGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATg < 1:1872574/100‑1 (MQ=255) aGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGGTTGCCAGGAGTCGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGa > 2:120726/1‑97 (MQ=255) gTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGc > 2:3117332/1‑100 (MQ=255) gTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGc > 1:1548846/1‑100 (MQ=255) gTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGc > 1:1177755/1‑100 (MQ=255) c‑cTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATcc > 1:532617/1‑100 (MQ=255) cTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCg < 1:3562877/100‑1 (MQ=255) cTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCg < 1:3446087/100‑1 (MQ=255) cTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCg > 1:2513182/1‑100 (MQ=255) aGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGta > 2:1076877/1‑100 (MQ=255) gATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGc > 2:1530327/1‑100 (MQ=255) aTCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGcg > 2:3619161/1‑100 (MQ=255) gTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGcgtcg < 1:668318/100‑1 (MQ=255) gTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGcgtcg > 1:3633454/1‑100 (MQ=255) cTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCgtcgtc > 1:3950115/1‑100 (MQ=255) cTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCCGAATGCCCATCCGTATAGCgtcgtc > 2:3604849/1‑100 (MQ=255) tAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCgtct > 2:226996/1‑100 (MQ=255) aGTGCTTTACTGCACACCAGATCGTTTGCCGGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCgtctt < 2:2825454/100‑1 (MQ=255) tGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCgtctttg < 2:558187/100‑1 (MQ=255) tGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCgtctttg < 1:3684379/100‑1 (MQ=255) tGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCgtctttg < 1:1070194/100‑1 (MQ=255) | CTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTG > NC_000913/4531019‑4531217 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |