| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 175,150:1 | +G | 17.1% | coding (44/1422 nt) | clcA → | H(+)/Cl(‑) exchange transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 175,149 | 1 | . | G | 17.1% | 640.3 / 155.2 | 205 | coding (43/1422 nt) | clcA | H(+)/Cl(‑) exchange transporter |
| Reads supporting (aligned to +/- strand): ref base . (95/75); new base G (17/18); total (112/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.20e-02 | |||||||||||
Only 100 of 220 total aligned reads displayed.
GGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGC > NC_000913/175050‑175248 | ggAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCcgcgc > 2:706801/1‑100 (MQ=255) aCGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑cgcgc‑ggcc < 2:816384/100‑4 (MQ=255) gTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTg < 1:447787/100‑1 (MQ=255) tGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGc > 2:2536227/1‑100 (MQ=255) cGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAGCTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCg < 2:1126349/99‑1 (MQ=255) cGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATCCTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGa < 2:3230288/100‑1 (MQ=255) cGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGa < 2:3053273/100‑1 (MQ=255) cGAGTAAAATGCCGTCATCTTATATGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAACCAACGCACGCCGCTC‑Gcc > 2:3194584/1‑95 (MQ=255) gAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑cgcgc‑ggccagatcg > 1:1559059/1‑91 (MQ=255) gAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCggt < 2:3950197/100‑3 (MQ=255) gAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCggt < 2:2549503/100‑3 (MQ=255) gAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTACCTCTTTAGAAACACCGCAGGCCGCCC‑GCCTGCGAc > 2:1237884/1‑100 (MQ=255) atctaaaTGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACg < 1:1160937/96‑1 (MQ=255) aGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACg < 2:573671/100‑1 (MQ=255) aGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCggtg < 1:3116217/100‑4 (MQ=255) aaaaTGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAg < 2:1079372/100‑1 (MQ=255) aaaTGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACgagat > 2:1160928/1‑96 (MQ=255) aaTGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCggtgtttct < 2:1213547/100‑9 (MQ=38) aaTGCCGTCAGCTTAGTTGTATGACCAATAAGTGAACAGTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGACGCGC‑GCCTGCGACGCAGAc > 2:428539/1‑100 (MQ=255) attccttcatcaTCTTTGTATGACCAACAAGTGATCATTGGATGCAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACa < 2:518791/94‑1 (MQ=255) tccGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAAc < 2:3149051/99‑1 (MQ=255) cGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTg < 1:2742880/100‑1 (MQ=255) tCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGAt > 1:343374/1‑100 (MQ=255) cATCTTATTTGTAAGACCAATAAGTGATCATTGGATGACAACTGATACTCCCTCTTGAGAAACACCGCAGGCCGAGC‑GCCTGCGACGCAGACAACTGAtt > 2:2434678/1‑100 (MQ=255) tCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCg > 2:3118424/1‑100 (MQ=255) cTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGc > 2:1552928/1‑100 (MQ=255) ttATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGcc > 1:460472/1‑100 (MQ=255) tagttGTATGACCAATAGGTGTTAATTGGATGAAAACTGATACTCCCTCTTTCGAGACACCGCAGGCCGCGG‑GACTGCGACGCAGACAACTGATTCGCCa > 2:2719807/4‑100 (MQ=255) tATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCa < 1:480935/100‑1 (MQ=255) tATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCa < 1:863684/100‑1 (MQ=255) tGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAActt > 1:2029466/1‑100 (MQ=255) tATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAActtct > 1:3188609/1‑100 (MQ=255) aTGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAActtctt < 1:807924/100‑1 (MQ=255) tGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTg > 1:3234979/1‑100 (MQ=255) gACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGa < 1:1395596/100‑1 (MQ=255) gACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGa > 1:2767159/1‑100 (MQ=255) aCCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTTGCCAActtctcg > 2:1757364/1‑96 (MQ=255) aCCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAg < 1:3350778/100‑1 (MQ=255) aCCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAg < 1:2736036/100‑1 (MQ=255) ccAATACGTGATCATTGGATGCACACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAg < 2:1540718/99‑1 (MQ=255) ccAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAgc > 2:3598330/1‑100 (MQ=255) aaTAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAgcgc > 1:1285785/1‑100 (MQ=255) aaTAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAgcgc < 1:59983/100‑1 (MQ=255) gTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATaa > 1:2301207/1‑100 (MQ=255) gTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATaa > 1:3855685/1‑100 (MQ=255) tGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATaaa > 1:2825544/1‑100 (MQ=255) gATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATaaaa > 2:3102484/1‑100 (MQ=255) cATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAAccc > 1:2702686/1‑100 (MQ=255) ttGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCg < 1:2358962/100‑1 (MQ=255) tGGATGAACACTGATACTCCCTCTTTCGAAACACCGCACGCCTCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAAcccc < 2:3346105/98‑1 (MQ=255) tGGATGAAACCTGATAGTCCCTCTTTAGGAACACCGCAGGCCGCGC‑GCCTGCGACGCCGAGCACTAATTCGCCGACTTCTTGAGCGCGCTGACAcccact > 2:1941862/1‑97 (MQ=255) ggATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGtt > 2:1848936/1‑100 (MQ=255) ggATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGtt > 1:412889/1‑100 (MQ=255) ggATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGtt > 1:2971118/1‑100 (MQ=255) tGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGc < 2:2931015/100‑1 (MQ=255) aaaaCTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCa > 2:1278248/1‑100 (MQ=255) aaaaCTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCa < 2:1406432/100‑1 (MQ=255) aCTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCAttt < 1:2277840/100‑1 (MQ=255) aCTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCAttt > 1:1068868/1‑100 (MQ=255) tGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTg < 1:3549476/100‑1 (MQ=255) gATCCTTCCTCTTTAGATACACCGCAGGCCGCGG‑GCCTGCGACGCACGCAACTGATTCGACAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTg < 1:2618328/99‑1 (MQ=255) tACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGttt < 2:1068861/100‑1 (MQ=255) aCTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTa < 1:1734510/100‑1 (MQ=255) tCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATg < 1:3591328/100‑1 (MQ=255) ccTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggc < 2:381718/100‑1 (MQ=255) ccTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggc > 1:965998/1‑100 (MQ=255) ccTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggc < 1:1456198/100‑1 (MQ=255) ccTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggc > 1:3295519/1‑100 (MQ=255) ctctTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcg > 2:3708089/1‑100 (MQ=255) ctctTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcg > 1:2461999/1‑100 (MQ=255) ctctTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcg > 1:3713785/1‑100 (MQ=255) tctTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcgg < 2:630412/100‑1 (MQ=255) ctTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGCCCACTGCTTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcggc > 2:1662691/1‑100 (MQ=255) ctTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcggc > 2:787300/1‑100 (MQ=255) ctTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcggc < 1:1990584/100‑1 (MQ=255) ctTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcggc < 2:2825677/100‑1 (MQ=255) tAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCa < 2:356085/98‑1 (MQ=255) cttctgcgtcGCAGG‑CGCGCGGCCTGCGGCGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgt < 1:3675497/91‑1 (MQ=37) aGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtc > 1:1524182/1‑100 (MQ=255) gAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcg > 1:109311/1‑100 (MQ=255) gAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcg > 2:2956276/1‑100 (MQ=255) gAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcg > 2:1187638/1‑100 (MQ=255) gAAACACCGCAGGACGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcg > 1:2655410/1‑100 (MQ=255) aaCACCGAAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcgtc > 1:2073440/1‑100 (MQ=255) gcgtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGtcgtcg > 1:3401840/5‑100 (MQ=255) gcgtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGtcgtcg > 2:2058735/5‑100 (MQ=255) acacCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGtcgtcg > 1:1640053/1‑100 (MQ=255) gtcGCAGG‑CGCGCGGCCTGCGGCGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGc > 2:3832320/3‑100 (MQ=255) gtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGc > 2:1982260/3‑100 (MQ=255) gtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGc > 1:1908787/3‑100 (MQ=255) gtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGc > 2:3643347/3‑100 (MQ=255) gtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGc > 1:633268/3‑100 (MQ=255) acCGCGGGCCGCGC‑GCCTGCGACGCAGACAACTGAGTCGTGAACTTCTTGAGCGCGATAAGACCACGTTAGCCATTTTGTTTATGGCGGCAGTAGTCGGc < 2:2650394/100‑1 (MQ=255) acCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGc < 1:3616048/100‑1 (MQ=255) ccGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGc > 2:1326447/1‑99 (MQ=255) cGCAGGCCGCGC‑GCCTGCGACGGAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCag > 2:2295378/1‑99 (MQ=255) cGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCAc < 2:2752568/100‑1 (MQ=255) cAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGc > 1:707226/1‑100 (MQ=255) cgcgc‑gCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCttgtt > 1:2876626/1‑100 (MQ=255) gcgc‑gcCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCttgttg > 1:549588/1‑100 (MQ=255) | GGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGC > NC_000913/175050‑175248 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |