| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,171,570:1 | +T | 29.2% | intergenic (+26/‑67) | rrlB → / → rrfB | 23S ribosomal RNA of rrnB operon/5S ribosomal RNA of rrnB operon |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,171,569 | 1 | . | T | 29.2% | 219.8 / 209.3 | 154 | intergenic (+25/‑68) | rrlB/rrfB | 23S ribosomal RNA of rrnB operon/5S ribosomal RNA of rrnB operon |
| Reads supporting (aligned to +/- strand): ref base . (27/82); new base T (2/43); total (29/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.74e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.00e-01 | |||||||||||
Only 100 of 155 total aligned reads displayed.
CGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCT > NC_000913/4171503‑4171668 | cGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAA > 2:3699533‑M1/1‑100 (MQ=255)cGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAA < 1:1673055‑M1/100‑1 (MQ=255)cGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAACTGTTTTGGCGG‑A‑TGAAAGAAGATTTTCAGCCTGATACAGATTAAA > 2:425019‑M1/1‑100 (MQ=255) gTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAAT > 2:2363510‑M1/1‑100 (MQ=255) gTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAAT > 2:2135617‑M1/1‑100 (MQ=255) gTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAAT > 1:1484505‑M1/1‑100 (MQ=255) ttGAGCTAACCGGTAGTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATC < 1:3887084‑M1/100‑1 (MQ=255) ttGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGTTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATC < 1:3827557‑M1/100‑1 (MQ=255) ttGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATC < 1:846854‑M1/100‑1 (MQ=255) ttGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATC < 1:1028382‑M1/100‑1 (MQ=255) ttGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATC < 1:227036‑M1/100‑1 (MQ=255) gAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAATCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGACACAGATTAAATCAG > 2:2301235‑M1/1‑100 (MQ=255) gAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAG > 2:3637157‑M1/1‑100 (MQ=255) gAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAG > 1:1496126‑M1/1‑100 (MQ=255) gAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAG < 2:1922328‑M1/100‑1 (MQ=255) gCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAc < 1:2874891‑M1/100‑2 (MQ=255) cTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgt < 1:703062‑M1/100‑13 (MQ=255) tAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgtt > 2:3184019‑M1/1‑87 (MQ=255) aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgtt > 1:2787051‑M1/1‑87 (MQ=255) aTGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttc > 1:2604649‑M1/1‑86 (MQ=255) aTGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttct < 1:3483814‑M1/100‑16 (MQ=255) gAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctga < 1:1729486‑M1/100‑18 (MQ=255) gAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctga < 2:415235‑M1/100‑18 (MQ=255) gAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctga < 1:3718273‑M1/100‑18 (MQ=255) gAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctga < 1:2583609‑M1/100‑18 (MQ=255) aaCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgat < 2:2807966‑M1/100‑19 (MQ=255) aaCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgat < 2:496899‑M1/100‑19 (MQ=255) aaCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgat < 2:3609277‑M1/100‑19 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgat < 2:774936‑M1/100‑19 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgat < 1:3464813‑M1/100‑19 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTGTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgat < 1:2736571‑M1/100‑19 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGTT‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgat < 2:2764023‑M1/100‑19 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:3295208‑M1/100‑20 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:322734‑M1/100‑20 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:711567‑M1/100‑20 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:3047966‑M1/100‑20 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:3066462‑M1/100‑20 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:568618‑M1/100‑20 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:1962096‑M1/100‑20 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATAAAATCAGAccgcttctgcgttctgatt < 2:1823511‑M1/100‑20 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:2536083‑M1/100‑20 (MQ=255) ccGTGAGTCTTAACCTTACAACGCCTAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 1:1348272‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCTAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:3496351‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:141903‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:2604632‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:2536937‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGTGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:313367‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:146010‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGACTAAATCAGAccgcttctgcgttctgatt < 2:3318596‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:3254676‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 1:1036832‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:2305577‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:885925‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:65588‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 1:2326573‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 1:3322905‑M1/100‑21 (MQ=255) cGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:570371‑M1/100‑21 (MQ=255) cGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:3538682‑M1/100‑21 (MQ=255) cGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:876550‑M1/100‑21 (MQ=255) cGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 1:408824‑M1/100‑21 (MQ=255) cGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgat < 2:3726969‑M1/98‑19 (MQ=255) cGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTGTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:619512‑M1/99‑21 (MQ=255) gTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGTGG‑A‑TGAGGGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaa > 2:1313704‑M1/1‑78 (MQ=255) gTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaa < 2:1951627‑M1/100‑23 (MQ=255) gTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaa < 1:2998316‑M1/100‑23 (MQ=255) gTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaa < 2:3878473‑M1/100‑23 (MQ=255) tGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaat < 1:427081‑M1/100‑24 (MQ=255) tGAGGCTTAACCTTACAACGCCGAAGCTGTGTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaat < 2:2367557‑M1/100‑24 (MQ=255) gAGGCTTAACCTTACAACGCCTAATCTGTTTTGGCGG‑ATTGAGCGAAGACTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaat < 1:1189916‑M1/100‑24 (MQ=255) gAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatc < 1:1969659‑M1/100‑25 (MQ=255) agtcttaACCTTACAACGCCGAAGCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatc < 2:2723294‑M1/97‑25 (MQ=255) aGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatc < 2:910492‑M1/100‑25 (MQ=255) aGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatc < 2:553020‑M1/100‑25 (MQ=255) ggCTTAACCTTACAACGCCGAATCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 2:3672629‑M1/100‑26 (MQ=255) ggCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctg < 1:2210014‑M1/100‑27 (MQ=255) ggCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctg < 1:2085429‑M1/100‑27 (MQ=255) gCTTAACCTTACAACGCCGAAGGTGGTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctg < 2:1938441‑M1/100‑27 (MQ=255) gCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctg < 2:315343‑M1/100‑27 (MQ=255) ttACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctgtatcaggc < 1:2842541‑M1/100‑35 (MQ=255) aCAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctgtatcaggctg < 1:527868‑M1/100‑37 (MQ=255) aaCGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaa < 1:3045758‑M1/100‑40 (MQ=255) cGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGGTTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaat < 1:3798530‑M1/100‑42 (MQ=255) cGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCa > 2:2949471/1‑100 (MQ=11) cGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGAGGTCTGATAAAACAGAATTTGCCTGGCGGCa > 1:2224438/1‑100 (MQ=11) gCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCGGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAg < 2:1985665/100‑1 (MQ=14) gCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAg > 1:2649922/1‑100 (MQ=31) gCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAg < 1:820501/100‑1 (MQ=31) cGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGCTACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTa > 2:1086027/1‑100 (MQ=17) cGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTa > 2:2994643/1‑100 (MQ=32) agatgttTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctc < 2:3920378‑M1/97‑48 (MQ=255) gCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctc < 1:3230090‑M1/100‑48 (MQ=255) gCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAgcgc < 1:3675267/100‑1 (MQ=33) gTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGGGGCAGTAgcgc > 2:956241/1‑97 (MQ=17) gTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCggt > 2:2025549/1‑100 (MQ=33) ttttGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCggtg > 1:2523326/1‑100 (MQ=33) ttttGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCggtg < 1:1252495/100‑1 (MQ=33) tGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTc < 1:3185668/100‑1 (MQ=33) tGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTc < 1:164754/100‑1 (MQ=33) ggCGG‑A‑TGAGAGAAGATTTACAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTcc > 2:1784714/1‑100 (MQ=17) cGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCa > 1:3068934/1‑100 (MQ=33) | CGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCT > NC_000913/4171503‑4171668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |