New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 417160724 (0.170)105 (0.800) 14/166 NT 82.4% intergenic (+63/‑30) rrlB/rrfB 23S ribosomal RNA of rrnB operon/5S ribosomal RNA of rrnB operon
?NC_000913 = 4213022 NA (NA)intergenic (+76/‑18) rrlE/rrfE 23S ribosomal RNA of rrnE operon/5S ribosomal RNA of rrnE operon

Only 100 of 164 total aligned reads displayed.

CGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4171503‑4171607
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagaCCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT  <  NC_000913/4213022‑4212924
                                                                                                                                                                                                              
CGTTGAGCTAATCGGTACTAATTAACCCTGAGGCTTAACCTTACAACGTCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAA                                                                                                          <  2:486253/100‑1
CGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAA                                                                                                          >  2:3699533/1‑100
CGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAA                                                                                                          <  1:1673055/100‑1
 GTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAAT                                                                                                         <  1:2231987/100‑1
 GTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCGGATACAGAATAAAT                                                                                                         >  2:937003/1‑100
  TTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATC                                                                                                        <  1:846854/100‑1
  TTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATC                                                                                                        <  2:3108395/100‑1
  TTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATC                                                                                                        <  1:1028382/100‑1
  TTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATC                                                                                                        <  1:227036/100‑1
    GAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAATCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGACACAGATTAAATCAG                                                                                                      >  2:2301235/1‑100
    GAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAG                                                                                                      >  1:1496126/1‑100
    GAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAG                                                                                                      >  2:3637157/1‑100
       CTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACC                                                                                                   >  1:885929/1‑100
                  TAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTT                                                                                        >  2:3184019/1‑100
                   AATGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTT                                                                                        >  1:2787051/1‑100
                    ATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCT                                                                                      <  1:3483814/100‑1
                      GAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGA                                                                                    <  2:415235/100‑1
                      GAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGA                                                                                    <  1:1729486/100‑1
                      GAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGA                                                                                    <  1:3718273/100‑1
                       AACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGA                                                                                    <  1:3733472/100‑1
                       AACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGA                                                                                    <  1:1596162/100‑1
                       AACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGAT                                                                                   <  2:496899/100‑1
                       AACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGAT                                                                                   <  1:2585705/100‑1
                       AACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGAT                                                                                   <  2:3609277/100‑1
                       AACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGAT                                                                                   <  2:2807966/100‑1
                        ACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGTT‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGAT                                                                                   <  2:2764023/100‑1
                        ACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  1:568618/100‑1
                        ACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  2:3066462/100‑1
                        ACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  2:677839/100‑1
                        ACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  1:711567/100‑1
                        ACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  1:3295208/100‑1
                        ACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  2:1962096/100‑1
                        ACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  2:1986979/100‑1
                        ACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  1:2536083/100‑1
                         CCGTGAGTCTTAACCTTACAACGCCTAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  1:1348272/100‑1
                         CCGTGAGGCTTAACCTTACAACGCCTAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  2:3496351/100‑1
                         CCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  1:2537540/100‑1
                         CCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  2:141903/100‑1
                         CCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  2:3531475/100‑1
                         CCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  2:2536937/100‑1
                         CCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  2:2604632/100‑1
                         CCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATT                                                                                  <  1:591862/100‑1
                         CCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  2:3254676/100‑1
                         CCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  2:885925/100‑1
                         CCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  2:2305577/100‑1
                         CCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  1:1036832/100‑1
                         CCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  1:3322905/100‑1
                          CGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  1:503548/100‑1
                          CGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  2:876550/100‑1
                          CGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  1:2684879/100‑1
                          CGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  2:3034382/100‑1
                          CGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  1:3062365/100‑1
                          CGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  1:380644/100‑1
                          CGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  1:408824/100‑1
                          CGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGAT                                                                                   <  2:3726969/98‑1
                          CGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTGTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTT                                                                                 <  2:619512/99‑1
                          CGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTA                                                                                <  1:3184041/100‑1
                           GTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGTGG‑A‑TGAGGGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAA                                                                               >  2:1313704/1‑100
                           GTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAA                                                                               <  2:1870242/100‑1
                           GTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAA                                                                               <  2:3878473/100‑1
                           GTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAA                                                                               <  2:1951627/100‑1
                           GTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAA                                                                               <  1:2998316/100‑1
                            TGAGGCTTAACCTTACAACGCCGAAGCTGTGTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAAT                                                                              <  2:2367557/100‑1
                             GAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATC                                                                             <  2:2618670/100‑1
                             GAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATC                                                                             <  1:3191567/100‑1
                             GAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATC                                                                             <  1:1969659/100‑1
                              AGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATC                                                                             <  1:1325308/100‑1
                              AGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATC                                                                             <  2:553020/100‑1
                              AGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATCT                                                                            <  1:391258/100‑1
                              AGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATCT                                                                            <  1:1481101/100‑1
                               GGCTTAACCTTACAACGCCGAATCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATCT                                                                            <  2:3672629/100‑1
                               GGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATCTG                                                                           <  1:2085429/100‑1
                                GCTTAACCTTACAACGCCGAAGGTGGTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATCTG                                                                           <  2:1938441/100‑1
                                        TTACAACGCCGAAGGTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGC                                                                   <  1:2842541/100‑1
                                                    agaTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTC                                                      <  2:3920378/97‑1
                                                     GCTGTTTTGGCGG‑ATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTC                                                      <  1:3230090/100‑1
                                                                                        TGATACAGATTAAATCAGACCTCTTCTGCGTTCTGATTTAATCTGAATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGT                    <  2:2222538/100‑1
                                                                                                     ATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAATGTTAAGCCTCACGGT       >  2:2490140/1‑100
                                                                                                     ATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGT       <  2:1768646/100‑1
                                                                                                     ATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGT       >  2:2634707/1‑100
                                                                                                     ATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGT       >  1:2412683/1‑100
                                                                                                     ATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGT       >  2:595694/1‑100
                                                                                                      TCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTT      >  1:2870526/1‑100
                                                                                                       CAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGGTAAGCCTCACGGTTC     >  1:3892004/1‑100
                                                                                                        AGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCA    <  2:2805324/100‑1
                                                                                                        AGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCA    >  1:2875001/1‑100
                                                                                                        AGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCA    <  2:3748613/100‑1
                                                                                                        AGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCA    <  2:1875824/100‑1
                                                                                                        AGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCA    >  1:3831445/1‑100
                                                                                                        AGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCA    >  1:1055590/1‑100
                                                                                                        AGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAAGCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCA    <  1:2134628/100‑1
                                                                                                         GACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCAT   >  1:1137798/1‑100
                                                                                                         GACCGCTTCTGCGTTCTGATCTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCAT   >  1:118908/1‑100
                                                                                                          ACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT  <  1:1742482/100‑1
                                                                                                          ACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT  <  1:2607197/100‑1
                                                                                                          ACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT  <  2:3160707/100‑1
                                                                                                          ACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT  <  1:3868743/100‑1
                                                                                                          ACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT  <  1:3450727/100‑1
                                                                                                          ACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT  <  2:2243887/100‑1
                                                                                                          ACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT  >  1:3554807/1‑100
                                                                                                                                                                                                              
CGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGG‑A‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4171503‑4171607
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcagaCCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCAATCCGCCAAAACACCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT  <  NC_000913/4213022‑4212924

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.