| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 83,590 | G→T | 15.5% | intergenic (‑61/+32) | leuA ← / ← leuL | 2‑isopropylmalate synthase/leu operon leader peptide |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 83,590 | 0 | G | T | 15.5% | 487.1 / 68.6 | 182 | intergenic (‑61/+32) | leuA/leuL | 2‑isopropylmalate synthase/leu operon leader peptide |
| Reads supporting (aligned to +/- strand): ref base G (74/75); new base T (11/17); total (88/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.78e-01 | |||||||||||
Only 100 of 185 total aligned reads displayed.
CGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAA > NC_000913/83492‑83689 | cgcAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATgg < 2:3161816/100‑1 (MQ=255) gcAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGgc > 2:2844911/1‑100 (MQ=255) gcAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGgc < 1:3016286/100‑1 (MQ=255) cAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGgcg < 2:3242191/100‑1 (MQ=255) aTGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCCATTGcgcg < 1:3505222/100‑1 (MQ=255) tgtgGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCgg > 1:932999/1‑100 (MQ=255) gtgGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCggg < 1:102506/100‑1 (MQ=255) tgGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGt > 2:65028/1‑100 (MQ=255) tgGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGt < 2:3400387/100‑1 (MQ=255) tagTATCGCAAAAAATGACTAGCTGGCTAATGGTTTGGATCCTTGTATCTTTTAGAGCGACTCGCTTAGGGCAT‑TAAAAAACCCGCGCAATTGcgcg > 2:323526/3‑97 (MQ=255) cttccgatctaataatGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCCATTGCGCGGGt < 2:1971851/90‑1 (MQ=255) ggTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCCATTGCGCGGGtt < 1:3405827/100‑1 (MQ=255) ggTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGtt < 2:932994/100‑1 (MQ=255) ggTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGtt < 1:869411/100‑1 (MQ=255) tATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAAACCCGCGCAATGGCGCGGGttt < 2:1640484/100‑1 (MQ=255) aTCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGttttt > 2:3948603/1‑100 (MQ=255) aTCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGttttt > 1:2500082/1‑100 (MQ=255) tCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCCATTGCGCGGGtttttt < 1:2719732/100‑1 (MQ=255) tCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGtttttt < 1:3049621/100‑1 (MQ=255) cGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTtttg < 1:3948633/100‑1 (MQ=255) cGAAAATAAAGACTTGCTGGCTCATGCTTTGCCTCTTTGTCTCTTTTAGAGCCCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCCATTGCGCGGGttttt < 2:1365082/98‑1 (MQ=37) gAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTtttgt > 1:1589026/1‑100 (MQ=255) gAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTtttgt > 2:2307597/1‑100 (MQ=255) gAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCCGGTTTtttg > 2:3752703/1‑99 (MQ=255) aaaTAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCCATTGCGCGGGtttttttatg < 1:1977947/100‑5 (MQ=38) nataatGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTtttgtttg > 2:3146224/2‑100 (MQ=255) aataatGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCCATTGCGCGGGtttttttatgc < 2:1258399/100‑6 (MQ=38) aataatGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCCATTGCGCGGGtttttttatgc < 1:3735024/100‑6 (MQ=38) aataatGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTtttgtttg < 2:1072847/100‑1 (MQ=255) aatGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGGGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCCATTGCGCGGGtttttttatgcc < 2:143545/98‑7 (MQ=37) atGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTg > 1:2168124/1‑100 (MQ=255) tGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCt > 2:1880569/1‑100 (MQ=255) tGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGc < 1:432570/100‑1 (MQ=255) gCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCtt > 2:626084/1‑100 (MQ=255) gCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCtt > 2:231451/1‑100 (MQ=255) gCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCtt < 1:2536790/100‑1 (MQ=255) gCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCtt < 2:3210811/100‑1 (MQ=255) cTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTa > 1:533801/1‑100 (MQ=255) cTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTa > 1:2389619/1‑100 (MQ=255) cTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTCTTGTTTGACTGCGTGCTGGCTTa > 2:28361/1‑100 (MQ=255) cTCATGGTTTGGGTCCTGGTCTCTTTTAGAGCGCCTCGATTCGGGCAT‑AAAAAAACCCGCGCAATAGCGCGGATTTTTTGTTTGACTTCGTGCTGGCtt > 2:1290675/1‑99 (MQ=255) cATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAAt > 1:3278207/1‑100 (MQ=255) cATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAAt < 1:2357029/100‑1 (MQ=255) cATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAAt < 2:1180027/100‑1 (MQ=255) tccgatctgTCCTTGTCTCTTTTAGAGCGCCTCGCTTCTGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGc < 1:2581561/92‑1 (MQ=255) tGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGc < 2:3028199/100‑1 (MQ=255) gTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTg > 1:1142170/1‑100 (MQ=255) tttGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTgg < 1:1475191/100‑1 (MQ=255) ttGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGa < 1:3296370/100‑1 (MQ=255) tGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGAt > 2:249326/1‑100 (MQ=255) gggTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATg > 2:3621608/1‑100 (MQ=255) ggTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATg < 1:3131687/99‑1 (MQ=255) gTCCTTGTCTCTTTTAGAGCGCCTCGCTTCTGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGcagatcgga > 2:2581544/1‑92 (MQ=255) gTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGTCGCGGGTTTTTTGTGTGACTGCGTGCTGCCTTAATGCTGGAt > 2:3836251/1‑97 (MQ=255) tCCTTATCTCTTTTAGAGCGCCTCACTTCGGGCAT‑AAAAAAACCCGCGCAATAGCGCGGGTTTTTTATTTGACTGCCTGCTGGCTTAATGCTAGATGcn < 2:3325696/99‑2 (MQ=255) ccTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGc < 2:2531090/100‑1 (MQ=255) cTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCt > 1:151239/1‑100 (MQ=255) tGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCa > 1:1251263/1‑100 (MQ=255) gTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCAc > 1:287802/1‑100 (MQ=255) ctctTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTc > 1:780489/1‑100 (MQ=255) tctTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCg > 2:720118/1‑100 (MQ=255) ttttAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTc > 1:2469720/1‑100 (MQ=255) ttttAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTc < 1:1047480/100‑1 (MQ=255) ttttAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTCTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTc > 1:2195478/1‑100 (MQ=255) tttAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCt > 1:1000789/1‑100 (MQ=255) agagCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTAcc < 2:361233/100‑1 (MQ=255) gagCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACcg < 2:678082/100‑1 (MQ=255) gcgcCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACcgcg > 1:2125352/1‑100 (MQ=255) gcCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCgcgc > 1:649623/1‑99 (MQ=255) gcCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCa < 1:776460/100‑1 (MQ=255) gcCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCa > 1:796961/1‑100 (MQ=255) cTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCaaa > 1:132948/1‑100 (MQ=255) cTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCaaa < 2:287802/100‑1 (MQ=255) cGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACTGCGCAaaga > 2:2184579/1‑100 (MQ=255) gCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAaagaa < 1:2761766/100‑1 (MQ=255) gCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAaagaa > 2:3091568/1‑100 (MQ=255) gCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTATTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGTCGCTCACTCGTCTACCGCGCAaaga > 1:739812/1‑99 (MQ=255) cAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGtt > 2:3543700/1‑100 (MQ=255) cAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGtt > 1:2419989/1‑100 (MQ=255) aT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGttt < 2:560244/100‑1 (MQ=255) caaaaaaCCCGCGCCATTGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGTTGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtag > 2:789584/2‑100 (MQ=38) caaaaaaCCCGCGCCATTGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtag > 1:1911129/2‑100 (MQ=255) aaaaaCCCGCGCCATTGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagta > 1:2944815/1‑100 (MQ=255) aaaaaCCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagta < 2:1876148/100‑1 (MQ=255) agaCCCGCGCCATAGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagt > 1:2676159/3‑100 (MQ=255) aaaCCCGCGCCATTGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagt > 1:3729269/1‑100 (MQ=255) aaaCCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagt < 1:3060867/100‑1 (MQ=255) aaCCCGCGCCATTGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagta > 2:2123148/1‑100 (MQ=255) aaCCCGCGCCATTGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagta > 1:403073/1‑100 (MQ=255) aCCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagtag > 2:2806849/1‑100 (MQ=255) cccGCGCCATTGCGCGGGTTTTTTGTTTGACTTCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagtagt > 2:2504896/1‑100 (MQ=255) cccGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagtagt > 1:1991590/1‑100 (MQ=255) cccGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagtagt > 2:864068/1‑100 (MQ=255) cgcAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGAc < 2:1792129/100‑1 (MQ=255) cgcAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGAc < 2:2000942/100‑1 (MQ=255) gcAATTGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGAGGCGTTTAGTAGTAGTAGAcc < 2:833673/100‑1 (MQ=255) cAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCg > 1:3793734/1‑100 (MQ=255) cAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCg < 1:1851567/100‑1 (MQ=255) tGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATa < 2:1027364/100‑1 (MQ=255) ggCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGAtca > 1:3289425/1‑98 (MQ=255) | CGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAAACCCGCGCAATGGCGCGGGTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGATAA > NC_000913/83492‑83689 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |