| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,322,698 | A→G | 15.2% | intergenic (‑193/+35) | secG ← / ← glmM | preprotein translocase membrane subunit/phosphoglucosamine mutase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,322,698 | 0 | A | G | 15.2% | 394.2 / 58.7 | 172 | intergenic (‑193/+35) | secG/glmM | preprotein translocase membrane subunit/phosphoglucosamine mutase |
| Reads supporting (aligned to +/- strand): ref base A (71/73); new base G (10/16); total (82/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.42e-01 | |||||||||||
Only 100 of 174 total aligned reads displayed.
CTAACCAAAGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCG > NC_000913/3322599‑3322796 | tAACCAAAGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATAAAAAAAAGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGAc < 2:2010529/100‑1 (MQ=255) aCCAAAGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACaa > 1:3270679/1‑100 (MQ=255) cAAAGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATc > 1:2044454/1‑100 (MQ=255) aaGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATcgc < 1:935728/100‑1 (MQ=255) gCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATcgccg < 1:2261331/100‑1 (MQ=255) gAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCgccgcc > 1:1704834/1‑100 (MQ=255) gAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCgccgcc < 1:1975905/100‑1 (MQ=255) tGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACTATCGCCGCC‑ttt < 1:2593868/100‑1 (MQ=255) gACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑tttt > 1:2843148/1‑100 (MQ=255) aCCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttt < 1:3814657/100‑1 (MQ=38) aCCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑ttttt > 1:503645/1‑100 (MQ=255) aCCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑ttttt < 1:3792834/100‑1 (MQ=255) ccTGCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑tttttt < 2:2359274/100‑2 (MQ=38) cTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttc < 1:724525/100‑3 (MQ=38) attCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAGAACAGCAAAACCGCTGTGTTCGCTGAGAAAAACGGCGACAATCGCCGCC‑TTTTTAg > 2:2562780/2‑100 (MQ=255) ttCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGc > 1:879816/1‑100 (MQ=255) ttCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGc > 2:3720730/1‑100 (MQ=255) ttCGCAAAGACAATTTTATCGCATTGTATCAACTGCAGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGTGATTGTCGCC‑ttttttct < 2:806366/100‑4 (MQ=37) tCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttctc < 2:2414792/100‑5 (MQ=37) tCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttctc < 2:3034287/100‑5 (MQ=37) tCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGcc > 2:1987543/1‑100 (MQ=255) cGCAAGGGCAATTTTAGCGCATTGTATAAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttctca < 2:1141756/100‑6 (MQ=25) gCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttctcag < 2:3216198/100‑7 (MQ=37) gCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttctcag < 1:2145477/100‑7 (MQ=37) gCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttctcag < 2:3628856/100‑7 (MQ=37) gCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAg > 1:1197524/1‑100 (MQ=255) cAAGAGCAACTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGt < 2:3071804/100‑1 (MQ=255) ggCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATc > 1:1331242/1‑100 (MQ=255) ggCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATc > 2:1170245/1‑100 (MQ=255) ggCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATc > 1:1332217/1‑100 (MQ=255) gCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTAGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCt < 1:2273553/100‑1 (MQ=255) tttATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGc < 1:695585/100‑1 (MQ=255) tATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCtt > 2:2917901/1‑100 (MQ=255) aTCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGGTGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCttt < 1:1640355/100‑1 (MQ=255) aTCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAACAGGCGACACTCGCCGCC‑TTTTTAGCCAGTTATCTAACGCttt < 1:3144850/100‑1 (MQ=255) aTCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCttt > 1:2541785/1‑100 (MQ=255) aTCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCttt < 1:2162227/100‑1 (MQ=255) cGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTaa > 2:2751786/1‑100 (MQ=255) cGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTaa < 1:3363056/100‑1 (MQ=255) cGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTaa < 2:3244136/100‑1 (MQ=255) cGCATTGTATCAACTGAGGAAAAAAACAGCAAATCCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTaa < 1:3941910/100‑1 (MQ=255) cATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAAc < 1:1915806/100‑1 (MQ=255) ttGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACgg < 1:2180176/100‑1 (MQ=255) aTCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCttt > 1:1188127/1‑100 (MQ=255) aTCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTAGCTGAGAAAAAAAGCGCAAAACGCCGCC‑CTTTAAGCGAGTAATCTAAAGCTATAAACgg > 2:2490420/1‑96 (MQ=255) cAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTa < 1:1974656/100‑1 (MQ=255) aaCTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTAc > 1:1698274/1‑100 (MQ=255) aaCTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTAc < 2:672689/100‑1 (MQ=255) aCTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACt > 2:2970514/1‑100 (MQ=255) gCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCa < 1:717315/100‑1 (MQ=255) gCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCa > 1:3454465/1‑100 (MQ=255) ggAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAACAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATc < 2:1015258/100‑1 (MQ=255) aaaaaaaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCgg < 1:1001256/100‑1 (MQ=255) aaaaaaaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCgg > 1:306240/1‑100 (MQ=255) aaaaaaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGc < 1:1953598/100‑1 (MQ=255) aaaaaaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGc < 2:1900011/100‑1 (MQ=255) aaaaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGa < 2:237957/100‑1 (MQ=255) aaaaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGa > 2:2213842/1‑100 (MQ=255) aaaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGAt < 1:987548/100‑1 (MQ=255) aaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATg > 2:3140789/1‑100 (MQ=255) aCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGAATCGGCGATGc > 2:1423565/1‑100 (MQ=255) cAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCg > 1:979025/1‑100 (MQ=255) aGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCgg > 1:3322041/1‑100 (MQ=255) gCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGgt > 2:1813235/1‑100 (MQ=255) cAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGgtg < 2:2169534/100‑1 (MQ=255) aaCCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGCCGATGcagtaaaa < 1:2650053/100‑8 (MQ=255) aCCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTACACGGCTTTTACTGCATCGGCGATGCGGTGTGCa < 2:327096/100‑1 (MQ=255) aCCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCa < 1:2945803/100‑1 (MQ=255) ccGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCaa > 1:2370281/1‑100 (MQ=255) cGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACCGCATCGCCGATGcagtaaaagcc < 1:1144351/100‑11 (MQ=38) gATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAAt < 2:1332208/100‑1 (MQ=255) gATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAAt < 2:1331233/100‑1 (MQ=255) tgtgTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCAAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTc < 2:2518295/100‑1 (MQ=255) gtgtTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTc < 2:620510/99‑1 (MQ=255) gtgtTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCa < 2:784515/100‑1 (MQ=255) tgtTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAg < 2:1198634/100‑1 (MQ=255) tgtTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAg < 2:2828777/100‑1 (MQ=255) tgtTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAg < 1:583083/100‑1 (MQ=255) tgtTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAg > 1:3506007/1‑100 (MQ=255) tCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCa < 2:1467221/100‑1 (MQ=255) cGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCAc < 1:1237408/100‑1 (MQ=255) cGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTCATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCAc < 2:3009011/100‑1 (MQ=255) gCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCAcc > 2:2682427/1‑100 (MQ=255) ctggctaaaaaGGCGGCGATTGTCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCt > 1:2368138/7‑100 (MQ=37) tGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTg > 2:3850129/1‑100 (MQ=255) ggctaaaaaGGCGGCGATTGTCGCCTTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTg > 1:3544193/5‑100 (MQ=25) gagaAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTgc < 1:1372422/100‑1 (MQ=255) gctaaaaaGGCGGCGATTGTCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTgcg > 2:1297318/4‑100 (MQ=38) gctaaaaaGGCGGCGATTGTCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCCATGCGGTGTGCAAATTCAGTCACCTgc > 2:27612/4‑99 (MQ=37) agaAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCACATTCAGTCACCTgcg > 1:3891568/1‑100 (MQ=255) agaAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTgcg > 1:1276833/1‑100 (MQ=255) agaAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTgc > 2:2048653/1‑99 (MQ=255) agaAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGGTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTgcg > 1:3325252/1‑100 (MQ=255) aaaaaaGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCt > 1:3788822/1‑100 (MQ=255) aaaaaGGCGGCGATTGTCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCtt > 1:3084662/1‑100 (MQ=38) acaGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAACCGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCg > 2:1750423/3‑100 (MQ=255) aaaGGCGGCGATTGTCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCg > 1:1000643/1‑100 (MQ=255) ggCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCt > 1:3652066/1‑100 (MQ=255) cGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGTATCGGCGATGCGGTGTGCAGATTCAGTAACCTGCGCTTCGtgtg > 2:3577300/1‑96 (MQ=255) gACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCg < 1:616868/100‑1 (MQ=255) | CTAACCAAAGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCG > NC_000913/3322599‑3322796 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |