| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,322,703 | C→T | 15.6% | intergenic (‑198/+30) | secG ← / ← glmM | preprotein translocase membrane subunit/phosphoglucosamine mutase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,322,703 | 0 | C | T | 15.6% | 412.2 / 56.0 | 166 | intergenic (‑198/+30) | secG/glmM | preprotein translocase membrane subunit/phosphoglucosamine mutase |
| Reads supporting (aligned to +/- strand): ref base C (67/73); new base T (10/16); total (77/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.63e-01 | |||||||||||
Only 100 of 175 total aligned reads displayed.
CAAAGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCC > NC_000913/3322604‑3322802 | cAAAGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATc > 1:2044454/1‑100 (MQ=255) aaaGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATAAACTGCGGAAAAAAAAAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATcg > 2:1300652/1‑100 (MQ=255) aaGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATcgc < 1:935728/100‑1 (MQ=255) aGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATcgcc < 2:1910677/100‑1 (MQ=255) gAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAGGGCGACAATCgccgcc > 1:347311/1‑100 (MQ=255) gAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCgccgcc < 1:1975905/100‑1 (MQ=255) tGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACTATCGCCGCC‑ttt < 1:2593868/100‑1 (MQ=255) gACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑tttt > 1:2843148/1‑100 (MQ=255) aCCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttt < 2:1874222/100‑1 (MQ=38) aCCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttt < 1:3814657/100‑1 (MQ=38) ccTTCGAAAGACCACTTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCACAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttt < 1:3273444/99‑1 (MQ=37) ccTGCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑tttttt < 2:2359274/100‑2 (MQ=38) cTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttc < 2:2340518/100‑3 (MQ=38) cTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttc < 1:724525/100‑3 (MQ=38) ttCGCAAGGGCAATTTTATCGCATTGTATTAACTGCGGAAAAAAACAGCCAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttct < 1:717190/100‑4 (MQ=37) ttCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttct < 2:2409874/100‑4 (MQ=38) ttCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGc > 1:879816/1‑100 (MQ=255) ttCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGc > 2:3720730/1‑100 (MQ=255) ttCGCAAAGACAATTTTATCGCATTGTATCAACTGCAGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGTGATTGTCGCC‑ttttttct < 2:806366/100‑4 (MQ=37) tCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttctc < 2:3034287/100‑5 (MQ=37) tCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGcc > 2:1987543/1‑100 (MQ=255) cGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGACAAAAGGCGACAATCGCCGCC‑TTTTTAGcc > 2:1267056/1‑99 (MQ=255) cGCAAGGGCAATTTTAGCGCATTGTATAAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttctca < 2:1141756/100‑6 (MQ=25) gCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttctcag < 2:3628856/100‑7 (MQ=37) gCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttctcag < 2:3216198/100‑7 (MQ=37) gCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGGCGATTGTCGCC‑ttttttctcag < 1:2145477/100‑7 (MQ=37) gCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAg > 1:1197524/1‑100 (MQ=255) cAAGAGCAACTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGt < 2:3071804/100‑1 (MQ=255) ggCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATc > 1:1331242/1‑100 (MQ=255) gCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCt < 1:2273243/100‑1 (MQ=255) aaTTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTaa < 1:1146188/100‑1 (MQ=255) aaTTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTaa > 1:1119582/1‑100 (MQ=255) tttATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGc < 1:695585/100‑1 (MQ=255) tATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCtt > 2:2917901/1‑100 (MQ=255) aTCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGGTGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCttt < 1:1640355/100‑1 (MQ=255) aTCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAACAGGCGACACTCGCCGCC‑TTTTTAGCCAGTTATCTAACGCttt < 1:3144850/100‑1 (MQ=255) aTCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCttt > 1:2233005/1‑100 (MQ=255) aTCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCttt < 1:2162227/100‑1 (MQ=255) tCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTa > 2:1576308/1‑100 (MQ=255) cGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTaa < 2:3244136/100‑1 (MQ=255) cGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTaa > 2:2751786/1‑100 (MQ=255) cGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTaa < 1:3363056/100‑1 (MQ=255) cGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAAGCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTa < 1:1930941/99‑1 (MQ=255) cGCATTGTATCAACTGAGGAAAAAAACAGCAAATCCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTaa < 1:3941910/100‑1 (MQ=255) cATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAAc < 1:1915806/100‑1 (MQ=255) ttGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACgg < 2:2174415/100‑1 (MQ=255) gTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCt > 1:418609/1‑100 (MQ=255) aTCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCttt > 1:2338033/1‑100 (MQ=255) aaCTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTAc > 1:1698274/1‑100 (MQ=255) aaCTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTAc < 2:672689/100‑1 (MQ=255) gCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCa > 1:3454465/1‑100 (MQ=255) aaaaaaaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCgg < 1:1001256/100‑1 (MQ=255) aaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATg > 2:3140789/1‑100 (MQ=255) aaCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATg < 2:1197515/100‑1 (MQ=255) aCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGCCAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGc < 1:2768313/100‑1 (MQ=255) aCAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGc < 1:3789589/100‑1 (MQ=255) cAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCg > 1:979025/1‑100 (MQ=255) gCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAGCTCTTTAAACGGCTTTTACTGCATCGCCGATGCAgt < 2:1443275/100‑1 (MQ=255) cAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGgtg < 2:1100881/100‑1 (MQ=255) aaCCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGgtgt < 2:214553/98‑1 (MQ=255) aaCCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACCGCATCGCCGATGcagtaaaa < 1:1957262/100‑8 (MQ=255) aCCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTACACGGCTTTTACTGCATCGGCGATGCGGTGTGCa < 2:327096/100‑1 (MQ=255) aCCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCa < 2:2541768/100‑1 (MQ=255) aCCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCa < 1:2945803/100‑1 (MQ=255) ccGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCaa > 1:2370281/1‑100 (MQ=255) gATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAAt < 2:1331233/100‑1 (MQ=255) tgtgTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCAAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTc < 2:2518295/100‑1 (MQ=255) tgtgTTCCCTGAGAAAAAAGGCGACAATCGCTGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTc < 2:1363829/100‑1 (MQ=255) gtgtTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTc < 2:620510/99‑1 (MQ=255) gtgtTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCa < 2:784515/100‑1 (MQ=255) tgtTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAg < 1:583083/100‑1 (MQ=255) tgtTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAg < 2:2828777/100‑1 (MQ=255) cGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCAc < 1:1237408/100‑1 (MQ=255) cGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTCATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCAc < 2:3009011/100‑1 (MQ=255) gCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCAcc > 2:2682427/1‑100 (MQ=255) cTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCt > 1:2577284/1‑100 (MQ=255) tGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTg > 2:3850129/1‑100 (MQ=255) ggctaaaaaGGCGGCGATTGTCGCCTTTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTg > 1:3544193/5‑100 (MQ=25) ggctaaaaaGGCGGCGATTGTCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTgc > 1:134089/5‑100 (MQ=37) gagaAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTgc < 1:1372422/100‑1 (MQ=255) gctaaaaaGGCGGCGATTGTCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCCATGCGGTGTGCAAATTCAGTCACCTgc > 2:27612/4‑99 (MQ=37) agaAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCACATTCAGTCACCTgcg > 1:3891568/1‑100 (MQ=255) agaAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTgcg > 1:1276833/1‑100 (MQ=255) agaAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGGTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTgcg > 1:3325252/1‑100 (MQ=255) aaaaaaGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCt > 1:3788822/1‑100 (MQ=255) aaaaaGGCGGCGATTGTCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCtt > 1:3084662/1‑100 (MQ=38) aaaaaGGCGGCGATTGTCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCtt > 1:996756/1‑100 (MQ=38) aaaGGCGGCGATTGTCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCg > 1:1000643/1‑100 (MQ=255) ggCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCt > 1:3652066/1‑100 (MQ=255) gCGACAATCGCCGGC‑TTTTTAGCCAGTTATCTAACGCTGTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCtt > 2:2437134/1‑100 (MQ=255) cGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGTATCGGCGATGCGGTGTGCAGATTCAGTAACCTGCGCTTCGtgtg > 2:3577300/1‑96 (MQ=255) gACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCg < 1:616868/100‑1 (MQ=255) gACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCg > 1:3039946/1‑100 (MQ=255) cAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGcc > 2:1628179/1‑100 (MQ=255) cAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGcc > 1:986007/1‑100 (MQ=255) cAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGcc < 1:3286820/100‑1 (MQ=255) aTCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCt > 2:1802704/1‑99 (MQ=255) tCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTc < 2:260510/100‑1 (MQ=255) tCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTc > 1:2265287/1‑100 (MQ=255) cgccgcC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTcc < 2:2996781/100‑1 (MQ=255) | CAAAGCGAATGACCTTCGCAAGGGCAATTTTATCGCATTGTATCAACTGCGGAAAAAAACAGCAAAACCGATGTGTTCGCTGAGAAAAAAGGCGACAATCGCCGCC‑TTTTTAGCCAGTTATCTAACGCTTTAAACGGCTTTTACTGCATCGGCGATGCGGTGTGCAAATTCAGTCACCTGCGCTTCGTCTTCGCCTTCC > NC_000913/3322604‑3322802 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |