| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,705,985 | T→C | 33.7% | intergenic (‑195/+113) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,705,985 | 0 | T | C | 33.7% | 427.9 / 285.3 | 291 | intergenic (‑195/+113) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base T (82/111); new base C (92/6); total (174/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.63e-19 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.78e-01 | |||||||||||
Only 100 of 296 total aligned reads displayed.
GCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTT > NC_000913/3705887‑3706084 | gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa < 1:532975/100‑1 (MQ=255) ctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTAt < 2:1280650/100‑1 (MQ=255) ccGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCg > 2:634613/1‑100 (MQ=255) cGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATcc > 2:276027/1‑98 (MQ=255) ggATGGCGCTGCACGCAGACGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTGGTTTATGCCGTTTGCGGCTTTAACGCCtttttcg > 2:1585974/1‑93 (MQ=25) gATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGcc < 1:1761329/100‑1 (MQ=255) aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGcc < 2:3391859/99‑1 (MQ=255) cgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑aa > 1:1970849/1‑100 (MQ=255) tGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAAt < 1:3629351/100‑1 (MQ=255) gaCGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACACAGTACGCTATGTTTATGCCGAATGCGTCTTTAACGCCTTATCCGTCCT‑Acgca > 2:1485222/2‑93 (MQ=25) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCg < 1:3017425/100‑1 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCg < 2:3814777/100‑1 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCg < 1:2869382/100‑1 (MQ=255) aCGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGt < 2:834424/100‑1 (MQ=255) aCGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGt > 2:1197579/1‑100 (MQ=255) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGt > 2:1686935/1‑99 (MQ=255) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTg < 2:814803/100‑1 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGc > 1:3551049/1‑100 (MQ=255) ggCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAAtt < 1:3346184/100‑1 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCa > 1:2314827/1‑100 (MQ=255) acaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCaa < 1:1145316/100‑1 (MQ=255) caGCGCCACCGGGTATACAGATTGTTGACTAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGTCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAAt < 2:2364817/100‑1 (MQ=255) aGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATa < 1:377823/100‑1 (MQ=255) cACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTg < 2:1773465/100‑1 (MQ=255) gggTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑Ga > 1:819259/1‑100 (MQ=255) gTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑‑AAATCGTGCAAATTCAATACATTG‑CA‑GAAt‑t > 1:1377222/1‑100 (MQ=255) ataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAt‑tt < 2:433215/100‑1 (MQ=255) taCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAt‑ttt > 1:1104764/1‑100 (MQ=255) taCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAt‑ttt > 2:1259000/1‑100 (MQ=255) aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTc < 2:296087/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCg < 2:3715525/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCg < 2:2290613/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCg < 2:1370813/100‑1 (MQ=255) ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAgg < 1:2593722/100‑1 (MQ=255) ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAgg < 1:698438/100‑1 (MQ=255) tgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGc < 2:2698205/100‑1 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGcc < 2:2211694/100‑1 (MQ=255) ttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCt < 1:1896689/100‑1 (MQ=255) ttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCt < 1:2713677/100‑1 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTg > 1:2901318/1‑100 (MQ=255) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGa > 2:2556248/1‑100 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATa < 1:88539/100‑1 (MQ=255) aaGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAg > 1:302455/1‑100 (MQ=255) aaGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAg < 1:1216033/100‑1 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGc < 1:723624/100‑1 (MQ=255) gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCg < 1:2122398/100‑1 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCgg < 1:239360/100‑1 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCgg < 2:1329633/100‑1 (MQ=255) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAAATTGTGTAAATTCAATAAATTG‑AT‑CGAT‑CCACGTAGGCCTGATAAGCGTAGCGCAt > 2:2006015/8‑100 (MQ=21) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCATGAC‑AAAAACCTGCAAATTCAATATATTG‑CA‑GGAT‑ACGTGTAGGCCTGATAAGCGTAGCGCa > 1:3159563/8‑100 (MQ=12) cttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAGTTCGTGCAAATTCAATAAATTG‑CA‑ATA‑‑TGACGTAGGCCTGATAAGCGTAGCGCATc > 1:909696/8‑100 (MQ=18) ttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑AC‑AAATTC‑TGCAAATTCAACAAATTG‑C‑‑GAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCa > 2:3139033/7‑100 (MQ=18) ttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAAATCGCTTAAATTCAATATATTG‑CA‑CCAT‑CCTCGTAGGCCTGATAAGCGTAGCGCATc > 1:3864568/7‑100 (MQ=21) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATc < 2:3528445/100‑1 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCa < 1:3694331/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAg < 1:2980829/100‑1 (MQ=255) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAAATTGTGTAAATTCAATAAATTG‑AT‑CGAT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAgg < 1:2006025/97‑1 (MQ=21) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑AC‑AAATTC‑TGCAAATTCAACAAATTG‑C‑‑GAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:3274975/3‑100 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑AC‑AAAAGCGTGCAAATTCAATACATTG‑CATGGGC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:2734088/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑ACAAAAATCTTGCCAATTCAATATATTG‑CA‑GGAC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:1742172/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAGTTCGTGCAAATTCAATAAATTG‑CA‑‑ATA‑TGACGTAGGCCTGATAAGCGTAGCGCATCAGGcg > 2:1141131/3‑99 (MQ=21) aggCCGGATAAGGCGTTCACGCCGCATCCGGCAT‑A‑‑AACAACGCGCAAATTCAATATATTG‑CG‑GAGA‑AAATGTAGGCCTGATAAGCGTAGCGCATCAGGct > 2:1960640/3‑99 (MQ=9) aggCCGGATAAGGCGTTAACGCCGCATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGc > 1:1418089/3‑100 (MQ=18) aggCCGGATAAGGAGATCACGCCGCATCCGGCCT‑AC‑AATACTGTGCAAATTCAATATATTG‑CA‑GGAA‑ACACGTAGGCCTGATAAGCCAAGCGCATCAGGc > 2:2434693/3‑100 (MQ=17) ggtcggataaggcgTTCACGCCGCATCCGACCC‑AC‑AAAGTCTTGCAAAATCAATAAATTG‑CA‑GGAA‑CGATGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1897403/11‑100 (MQ=21) ggCCGGATAAGGGGCTTACGCCGCATCCGGCAT‑AC‑AAGAACGTGCAAATTCAACAAATTGTGATGCAT‑CCT‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:746507/2‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑AC‑AAAAGCATGCAAATTCAATATATTG‑CA‑GAGT‑TCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:840017/2‑100 (MQ=17) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑AC‑AAAAGCATGCAAATTCAATATATTG‑CA‑GAGT‑TCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1631156/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAGATCGTGCAAATTCAATATATTG‑CA‑TGAG‑CCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:20689/2‑100 (MQ=17) gCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GACT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 2:1059684/1‑100 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑AC‑AAAATCGTGCTAATTCAATATATTG‑CA‑GAAA‑CCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:1535773/1‑99 (MQ=18) gCCGGATAAGGCGTTTACGCCGCATCCGGCCT‑AC‑AAAATCGTGCTAATTCAATATATTG‑CA‑GAAA‑CCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:2328186/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAAGTCGTATAAATTCAATGTATTG‑CA‑GTTT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCaa > 1:1590760/1‑99 (MQ=21) gCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAAAGCACGCAAACTCAATATATTG‑CA‑AAGA‑TCATGTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 2:2144583/1‑99 (MQ=14) gCCGGATAAGGCGTTCACGCCGCATCCGGCCT‑AC‑AAAAACCTGCAAATTCAATATATTG‑CA‑GGAT‑ACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 1:3472357/1‑99 (MQ=17) ccggataaggcgTTTACGCCTTATCCGGCCT‑AC‑AAAACAGTGCAAATTCAATATATTG‑CA‑ATCT‑TCTGGTAGGCCTGATAAGCATCGCGCATCAGGCaag > 1:3911787/9‑98 (MQ=18) ccGGATAAGGCGTTTACGCCGCATCCGGCCT‑AC‑AAAATCGTGCTAATTCAATATATTG‑CA‑GAAA‑CCTTGTAGGCCTGATAAGCGTAACGCATCAGGc > 2:1849155/1‑97 (MQ=17) cggataaggcgTTTACGCCGCATCCGGCCT‑AC‑AAAACAGTGCAAATTCAATATATTG‑CA‑ATCT‑TCTGGTAGGCCTGATAAGCATCGCGCATCAGGCaagc > 1:1637391/8‑97 (MQ=21) ggataaggcgTTCACGCCGCATCCTGCCT‑AC‑AAAAGCACGCAAATTCAATATATTG‑CA‑GAGA‑TGGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAtttt > 1:2191830/7‑100 (MQ=14) ggataaggcgTTCACGCCGCATCCTGCCT‑AC‑AAAAGCACGCAAATTCAATATATTG‑CA‑GAGA‑TGGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAtttt > 1:2198275/7‑100 (MQ=14) ggataaggcgTTCACGCCGCATCCGGCCT‑ACAAAAATCTTGCCAATTCAATATATTG‑CA‑GGAC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:1516479/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCT‑AC‑‑AAATCATGCAAATCCAAAATATTG‑CA‑GGAG‑TTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAtttat > 1:307670/7‑98 (MQ=21) ggATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAtttt < 2:3883383/100‑1 (MQ=255) gataaggcgTTAACGCCGCATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAttttt > 2:2615176/6‑100 (MQ=18) aTGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:1883779/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:302455/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:3804108/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:3235920/100‑1 (MQ=255) taaggcgTTTACGCCGCATCCGGCCT‑AC‑AAAAGCGTGCAAATTCAATACATTG‑CA‑TGGG‑CCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAattttac > 2:1429123/4‑98 (MQ=18) gcggcgTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 1:985615/100‑1 (MQ=255) gcgTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgccttt > 2:2926462/1‑100 (MQ=255) cgTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 2:3595180/100‑1 (MQ=255) ttAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc < 1:1820633/100‑1 (MQ=255) ttAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc < 1:3227671/100‑1 (MQ=255) tAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa < 1:1116322/100‑1 (MQ=255) aaCGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCAt > 1:2086203/1‑100 (MQ=255) aCGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc > 1:564073/1‑100 (MQ=255) aCGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc > 2:1502175/1‑100 (MQ=255) aCGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 1:248586/100‑1 (MQ=255) tATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCtt > 1:128132/1‑100 (MQ=255) | GCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCT‑AC‑AAAATCGTGCAAATTCAATACATTG‑CA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTT > NC_000913/3705887‑3706084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |