| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,370,029 | T→A | 16.0% | intergenic (+26/‑187) | pspE → / → ycjM | thiosulfate:cyanide sulfurtransferase (rhodanese)/alpha amylase catalytic domain family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,370,029 | 0 | T | A | 16.0% | 389.7 / 63.5 | 162 | intergenic (+26/‑187) | pspE/ycjM | thiosulfate:cyanide sulfurtransferase (rhodanese)/alpha amylase catalytic domain family protein |
| Reads supporting (aligned to +/- strand): ref base T (60/76); new base A (6/20); total (66/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.17e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.17e-01 | |||||||||||
Only 100 of 163 total aligned reads displayed.
GAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTG > NC_000913/1369932‑1370127 | tagaTGGGATATACCCTCGTTGAGACCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCTGCGCTTAt < 2:1403917/97‑1 (MQ=255)gagaTGGGATATGCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATgc > 1:2591228/1‑100 (MQ=255) agaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATgcg > 2:282691/1‑100 (MQ=255) gaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATgcgc > 1:964733/1‑100 (MQ=255) gaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAgcgc < 2:1099645/100‑1 (MQ=255) gggATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgc < 1:3248898/100‑2 (MQ=255) ggATATATCCACGTTGAGAAAGCCGTTGGTTTGGCAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgct < 2:1407054/100‑3 (MQ=255) ggATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgct < 1:2808018/100‑3 (MQ=255) ggATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgct < 2:1888277/100‑3 (MQ=255) ggATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgct < 1:697652/100‑3 (MQ=255) gATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑ttt < 1:3551888/100‑1 (MQ=255) tataCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑ttttt < 1:1868062/100‑1 (MQ=255) tataCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcat < 1:559032/100‑6 (MQ=255) tataCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcat < 1:387934/100‑6 (MQ=255) attcccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcatg < 1:1894401/97‑7 (MQ=255) ataCCCACGTTTAGAACGCCGGTGGCTTGAACGACATCCCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAACGGCTCATAAGCGCCgctcat < 2:2765835/99‑6 (MQ=255) ataCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcatg < 1:2986671/100‑7 (MQ=255) taCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑ttttttt > 1:198239/1‑100 (MQ=255) taCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑ttttttt < 1:238953/100‑1 (MQ=255) taCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑ttttttt < 2:181128/100‑1 (MQ=255) taCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑ttttttt < 1:1589739/100‑1 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑tttttttt > 2:452067/1‑100 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcatggt < 1:2477799/100‑9 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcatggt < 1:1689405/100‑9 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAACACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcatgg < 2:411984/99‑8 (MQ=255) cccACGTTGAGAACGCCGTTGGCCTGAAAGATATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcatgg < 2:905070/98‑8 (MQ=255) cccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑ttttttttt > 2:3248696/1‑100 (MQ=255) cccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑ttttttttt > 2:1976938/1‑100 (MQ=255) cccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTAACCATGAGCGGCGATTATGCGCCG‑ttttttttt > 1:1507570/1‑100 (MQ=255) ccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTc < 2:723162/100‑1 (MQ=255) cACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCt < 1:2943357/100‑1 (MQ=255) cACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCt < 1:2056223/100‑1 (MQ=255) cGTTGAGAACTCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGt < 2:2591173/100‑1 (MQ=255) ttGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTTCTGTc < 1:1446348/100‑1 (MQ=255) ttGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTca > 2:1937863/1‑100 (MQ=255) ttGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTca < 2:2325012/100‑1 (MQ=255) tGAGAACGCGGGTGGCATGAAAGACATCGCAAGGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTGATGCGCCG‑TTTTTTTTTCTGTca < 2:2485996/99‑1 (MQ=255) tGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTcac > 2:87742/1‑100 (MQ=255) gagaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTcaca < 2:3702170/100‑1 (MQ=255) aCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCtt > 2:3154355/1‑100 (MQ=255) cGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTa > 1:3426864/1‑100 (MQ=255) cGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTAttt < 1:200230/100‑1 (MQ=255) ggTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCCCACCTTATTTa > 1:551985/1‑100 (MQ=255) gTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTAc > 2:2397603/1‑100 (MQ=255) tGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACa < 2:1741008/100‑1 (MQ=255) gacTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATc < 2:59565/98‑1 (MQ=255) gCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGAGCCG‑TTTTTTTTTCTGTTACACCTTATTTa > 1:941743/1‑96 (MQ=255) ccTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATcc > 1:178425/1‑100 (MQ=255) gAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCa > 1:2717158/1‑100 (MQ=255) aGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTTTCACACCTTATTTACATCCCCATAg > 2:2680263/1‑100 (MQ=255) aCATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGat > 1:1023273/1‑100 (MQ=255) aCATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGat < 1:3154376/100‑1 (MQ=255) cATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTTTTTTTTTTCTTATTTACATCCCTCTAGat > 2:466473/1‑99 (MQ=255) tCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTTTTTTTCAACTTATTTACATCCGCATAGa > 2:2346192/1‑96 (MQ=255) gCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTAttt > 1:1228869/1‑100 (MQ=255) gCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTAttt < 2:1809552/100‑1 (MQ=255) aTGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCg < 1:3726893/100‑1 (MQ=255) ccGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCa < 2:523580/100‑1 (MQ=255) aGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTc < 2:213815/100‑1 (MQ=255) ggTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 2:822170/1‑98 (MQ=255) gTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTcac > 1:339077/1‑100 (MQ=255) gTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCACATAGATTATTTGCGTCAGCTcac > 2:334089/1‑100 (MQ=255) tCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTcaca > 1:100972/1‑100 (MQ=255) cAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACaa < 2:1608077/100‑1 (MQ=255) aaaGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACaaa < 1:3636513/100‑1 (MQ=255) aaGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAAt > 1:2413625/1‑100 (MQ=255) aGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCT‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGcaca < 2:2316170/94‑1 (MQ=255) ggTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTTCTGTTTCACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAAt > 1:1790100/1‑99 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCtt > 2:3568077/1‑100 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCtt > 1:677023/1‑100 (MQ=255) aaaGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCttt > 1:260072/1‑100 (MQ=255) aaaGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCttt < 2:2211670/100‑1 (MQ=255) aaaGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCttt < 2:1988243/100‑1 (MQ=255) gAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCGGCTCACAAATACGCTTTTTc < 2:2413613/100‑1 (MQ=255) aaTTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTcc < 1:2227532/100‑1 (MQ=255) aaTTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTcc < 1:1261420/100‑1 (MQ=255) aTTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTTTCCCACCATCTTTACATCCCCCTAGAATATTTGCGTCAGCTCACAAATACGCCTTTTccc > 2:2276268/1‑100 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCt < 2:926495/100‑1 (MQ=255) tCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCGGTAACACCTTATTTACATCCTCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTg < 2:1231860/100‑1 (MQ=255) tCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTgg > 2:1261536/1‑100 (MQ=255) cACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTg < 1:2530817/100‑1 (MQ=255) cACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTgg < 2:345727/100‑1 (MQ=255) cACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTgg < 2:208174/100‑1 (MQ=255) aaaaaaaacggcgCATAAGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGt > 1:451593/9‑100 (MQ=255) ccATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTa < 2:677019/100‑1 (MQ=255) aaaaaaacggcgCATAAGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTa > 1:2915528/8‑100 (MQ=255) aaaaaaacggcgCATAAGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTa > 1:686984/8‑100 (MQ=255) aaaaaaacggcgCATAAGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTa > 1:3817859/8‑100 (MQ=255) aaaaacggcgCATAAGCGCCGTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaa > 1:667297/6‑100 (MQ=255) tGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaaa > 1:2609623/1‑100 (MQ=255) gAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATATATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaaaa < 1:2694540/100‑1 (MQ=255) gcggcgCTTATGCGCCG‑TTTTTTTTTTTTTTTTTTCTTATTAACATCGCCATAGATTATTTGATTTAGCTCGGAAATACGCTTTTTCCCTTGTtaaaa > 2:527271/1‑98 (MQ=255) gcggcgCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAAt < 1:872049/100‑1 (MQ=255) cggcgCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATg > 2:2212662/1‑100 (MQ=255) gcgcTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAAt < 2:3409164/97‑1 (MQ=255) cgcTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGAtt > 2:3746789/1‑100 (MQ=255) cgcTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGAtt < 2:1183917/100‑1 (MQ=255) gcTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGAttt < 1:245665/100‑1 (MQ=255) gcTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGAttt > 1:773425/1‑100 (MQ=255) aTGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTg < 2:1606625/100‑1 (MQ=255) | GAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTG > NC_000913/1369932‑1370127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |