| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,628,231 | Δ14 bp | coding (917‑930/1233 nt) | nadR → | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4628230 | 3 (0.040) | 80 (1.020) | 56/198 | 0.3 | 97.6% | coding (916/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor |
| ? | NC_000913 | 4628245 = | 1 (0.010) | coding (931/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor | |||||
GGCGGTGATGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGCATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTT > NC_000913/4628131‑4628329 | ggcggTGATGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTgg > 2:1353073/1‑100 (MQ=255) gCGGTGATGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGg > 1:715835‑M1/1‑99 (MQ=255) ggTGATGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgat < 2:1478480‑M1/100‑4 (MQ=255) gatgaGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgatttt > 1:1660141‑M1/1‑94 (MQ=255) atgaGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttg < 2:155225‑M1/100‑8 (MQ=255) tgaGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgt > 2:1676512‑M1/1‑92 (MQ=255) agaTCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtca < 2:1933321‑M1/100‑11 (MQ=255) agaTCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtca < 2:279067‑M1/100‑11 (MQ=255) agaTCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtca < 1:1998300‑M1/100‑11 (MQ=255) agaTCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtca > 1:1608675‑M1/1‑90 (MQ=255) aTCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcacc < 1:1558541‑M1/100‑13 (MQ=255) tCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcacca < 1:242457‑M1/100‑14 (MQ=255) cGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGCATTTATCGATAcc < 2:199339/100‑1 (MQ=255) cGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGATCAACACATTGATTTTGCGGTGAAATATGCCAATAACGTGGCATTTATCGATAcc < 2:199189/100‑1 (MQ=255) cATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactc > 2:677281‑M1/1‑84 (MQ=255) aTTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactca < 2:1726888‑M1/100‑18 (MQ=255) ttGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcag < 1:1006670‑M1/100‑19 (MQ=255) tGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcagg < 2:832869‑M1/100‑20 (MQ=255) gCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggc > 1:1450734‑M1/1‑80 (MQ=255) cAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcg < 2:1886923‑M1/100‑22 (MQ=255) cAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcg > 1:668599‑M1/1‑79 (MQ=255) cAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcg > 1:122903‑M1/1‑79 (MQ=255) cAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcg < 1:536845‑M1/100‑22 (MQ=255) cAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcg > 1:271303‑M1/1‑79 (MQ=255) aTTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttct > 1:162175‑M1/1‑75 (MQ=255) aTTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttct > 2:1286127‑M1/1‑75 (MQ=255) tCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgc < 2:1498052‑M1/100‑28 (MQ=255) tCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgc < 2:1450725‑M1/100‑28 (MQ=255) cTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgtttttgtcaccactcagtcgttctgc > 1:658413‑M1/1‑72 (MQ=255) cTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaa < 1:1558191‑M1/100‑33 (MQ=255) tACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaag < 2:1665422‑M1/100‑34 (MQ=255) tACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaag < 2:1647651‑M1/100‑34 (MQ=255) aCGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagt > 1:402165‑M1/1‑66 (MQ=255) aCGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagt > 1:1231679‑M1/1‑66 (MQ=255) cGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagta < 2:5883‑M1/100‑36 (MQ=255) cGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagta > 2:718099‑M1/1‑65 (MQ=255) gATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtac > 2:1385027‑M1/1‑64 (MQ=255) aTAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacg < 1:1836151‑M1/100‑38 (MQ=255) aaaTCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaag > 2:1132378‑M1/1‑60 (MQ=255) aaTCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagg > 2:1555927‑M1/1‑59 (MQ=255) gcgcTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgg < 1:1576814‑M1/100‑46 (MQ=255) cgcTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcggg < 2:715834‑M1/100‑47 (MQ=255) tGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaac < 1:1197736‑M1/100‑50 (MQ=255) gCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatc > 2:327583‑M1/1‑48 (MQ=255) gCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatc > 2:1025559‑M1/1‑48 (MQ=255) ccACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatcc > 1:1814575‑M1/1‑47 (MQ=255) cACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccg < 2:1759359‑M1/100‑55 (MQ=255) cGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgtt < 2:1608663‑M1/100‑57 (MQ=255) cGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgtt > 1:1006438‑M1/1‑44 (MQ=255) cTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcg < 1:1555938‑M1/100‑59 (MQ=255) tCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgt > 2:529308‑M1/1‑41 (MQ=255) aaTACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgc < 1:849501‑M1/100‑62 (MQ=255) aTACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgca > 1:1607445‑M1/1‑38 (MQ=255) aTACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgca > 2:1982018‑M1/1‑38 (MQ=255) aTACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgca > 2:1900965‑M1/1‑38 (MQ=255) aTTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcg > 1:1900395‑M1/1‑34 (MQ=255) aTTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcg > 1:101549‑M1/1‑34 (MQ=255) aTTGATTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcg > 1:1170515‑M1/1‑34 (MQ=255) aTTGATTTTGCGGTGAAATATGCCAATAAAGTGGgatgttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcg > 2:1084839‑M1/1‑34 (MQ=255) ttattTTGCGGTGAAATATGCCCATAAAGCGGgattttggcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatgcgttcgtgcaggcgct < 2:1618614‑M1/98‑69 (MQ=255) aTTTTGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggatcacc > 2:1138282‑M1/1‑30 (MQ=255) ttttGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgat < 1:529307‑M1/100‑72 (MQ=255) tttGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgatt < 1:1286133‑M1/100‑73 (MQ=255) ttGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattg < 1:1676524‑M1/100‑74 (MQ=255) ttGCGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattg < 2:101550‑M1/100‑74 (MQ=255) cGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatg < 1:717723‑M1/100‑77 (MQ=255) cGGTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatg < 2:1814563‑M1/100‑77 (MQ=255) ggTGAAATATGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatga > 2:326118‑M1/1‑23 (MQ=255) atatGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccg < 1:327582‑M1/100‑84 (MQ=255) tGCCAATAAAGTGGgtttttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgttt < 1:1982030‑M1/100‑87 (MQ=255) tGCCAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgttt < 2:402166‑M1/100‑87 (MQ=255) ccAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgtttcg > 2:745173‑M1/1‑12 (MQ=255) cAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgtttcga > 1:733521‑M1/1‑11 (MQ=255) cAATAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgtttcga > 1:1437120‑M1/1‑11 (MQ=255) tAAAGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgtttcgatct < 2:1969475‑M1/100‑93 (MQ=255) aaGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgtttcgatctgg < 2:270860‑M1/100‑95 (MQ=255) aaGTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgtttcgatctgg < 2:547407‑M1/100‑95 (MQ=255) gTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgtttcgatctggtg > 2:1329294‑M1/1‑4 (MQ=255) gTGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgtttcgatctggtg > 2:1204520‑M1/1‑4 (MQ=255) tGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgtttcgatctggtga < 1:677281‑M1/100‑98 (MQ=255) tGGgattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgcttcgatctggtga < 1:1353079‑M1/100‑98 (MQ=255) ggCATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCg > 2:713526/1‑99 (MQ=255) ggattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgtttcgatctggtgatc > 1:559064‑M1/1‑1 (MQ=255) ggattttgtcaccactcaggcgttctgcaaaaagtacgaagggcgggaacatccgttcgtgcaggcgctgattgatgaataccgtttcgatccggtgatc > 2:657422‑M1/1‑1 (MQ=255) | GGCGGTGATGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGCATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTT > NC_000913/4628131‑4628329 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |