Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,950,302 Δ1 bp 15.7% coding (221/1773 nt) aspS ← aspartyl‑tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,950,3010G.15.7% 475.2 / 86.7 159coding (222/1773 nt)aspSaspartyl‑tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base G (66/68);  new base . (18/7);  total (84/75)
Fisher's exact test for biased strand distribution p-value = 4.89e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.61e-01

Only 100 of 161 total aligned reads displayed.

ACATCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGCACGATACCTTCG  >  NC_000913/1950203‑1950400
                                                                                                    |                                                                                                   
aCATCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACgg                                                                                                    <  2:3705783/100‑1 (MQ=255)
 cATCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGt                                                                                                   >  2:300048/1‑100 (MQ=255)
   tCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGc                                                                                                 <  1:1895261/100‑1 (MQ=255)
      gcgcGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCg                                                                                              >  1:3977982/1‑100 (MQ=255)
      gcgcGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCg                                                                                              <  2:3438354/100‑1 (MQ=255)
        gcgGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTg                                                                                            <  2:253426/100‑1 (MQ=255)
        gcgGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTg                                                                                            <  1:1998328/100‑1 (MQ=255)
          ggTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGGGC‑ACCGTAC‑GTGCGCGTGAc                                                                                          <  2:4019513/100‑1 (MQ=38)
          ggTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTGCGTCACGGGC‑ACCGTAC‑GTGCGCGTGAc                                                                                          <  2:2622848/100‑1 (MQ=38)
           gTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGGGC‑ACCGTAC‑GTGCGCGTGAcg                                                                                         <  2:3911784/100‑2 (MQ=38)
           gTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGtta                                                                                           >  1:1719680/1‑96 (MQ=255)
           gTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGAcc                                                                                         <  2:1072081/100‑1 (MQ=255)
             tgattaTCGTCAGCGAGGACGCCGGTAATTCGATTACGCGGGTCGCCATATCGCGGTTAATTTTTTTTTCGTCACGGGCTC‑CGTAC‑GTGCGCGTGAcgaa                                                                                       <  1:99127/100‑4 (MQ=16)
             tgatgaTAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGGGC‑ACCGTAC‑GTGCGCGTGAcgaa                                                                                       <  2:588472/100‑4 (MQ=37)
             tgatgaTAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGGGC‑ACCGTAC‑GTGCGCGTGAcgaa                                                                                       <  2:4326837/100‑4 (MQ=37)
             tgatgaTAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTg                                                                                       <  2:1550810/100‑1 (MQ=255)
             tgatgaTAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTg                                                                                       <  1:3605120/100‑1 (MQ=255)
               atgatAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGaa                                                                                     >  1:1536735/1‑100 (MQ=255)
                tgatAGTCAGCGAGGACGCCAGAACTTCGATTTAGTCGGTGGCCATATCGCGGTTAATATTTTTTTCGTTACGCGC‑A‑CGTAAGGTGGCCGTGACCTGaa                                                                                     >  1:2651104/1‑99 (MQ=255)
                 gatAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGATCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATg                                                                                   >  1:2345422/1‑100 (MQ=255)
                  atAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGc                                                                                  >  1:2289389/1‑100 (MQ=255)
                   tAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGc                                                                                  <  1:2246495/99‑1 (MQ=255)
                   tAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCa                                                                                 <  2:3954423/100‑1 (MQ=255)
                   tAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCa                                                                                 <  2:2132309/100‑1 (MQ=255)
                   tAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCa                                                                                 >  1:2958989/1‑100 (MQ=255)
                    aggcAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAg                                                                                <  1:1051647/97‑1 (MQ=255)
                       cAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAAc                                                                             >  2:1598245/1‑100 (MQ=255)
                        aGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAAc                                                                             >  1:70664/1‑99 (MQ=255)
                        aGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACt                                                                            >  1:2160162/1‑100 (MQ=255)
                         gCGAGGACGCGGGCACGTCGGGTTGGTCGGTCGCCATATTGCGGTGAGTATTTTTTTCGGCACGCGC‑A‑GGTACGGTGCCCGTGACCTGAATGCAg                                                                                <  1:3760444/95‑1 (MQ=255)
                          cGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCa                                                                          <  2:2734524/100‑1 (MQ=255)
                          cGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCa                                                                          <  1:1058035/100‑1 (MQ=255)
                          cGAGGACGCCAGCACTTCGATATCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATACAGAACTCa                                                                          >  1:4264138/1‑100 (MQ=255)
                          cGAGGACGCCAGCACTTCGATATCGCCGGTAGCCATATCGCGGTTAATATTTTTTTCTTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCa                                                                          >  1:498005/1‑100 (MQ=255)
                                cGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGc                                                                    >  1:2573541/1‑100 (MQ=255)
                                cGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGc                                                                    >  2:260646/1‑100 (MQ=255)
                                 gCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCa                                                                   >  1:4067131/1‑100 (MQ=255)
                                  ccAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAg                                                                  <  2:958163/100‑1 (MQ=255)
                                   cAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGt                                                                 <  2:231818/100‑1 (MQ=255)
                                    aGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTa                                                                       >  1:1034375/1‑93 (MQ=255)
                                     gCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTc                                                               >  2:3637710/1‑100 (MQ=255)
                                          tCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAgg                                                          <  2:524176/100‑1 (MQ=255)
                                           cGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGc                                                         >  1:3759312/1‑100 (MQ=255)
                                           cGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGc                                                         <  2:3571630/100‑1 (MQ=255)
                                            gATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGcc                                                        >  1:128693/1‑100 (MQ=255)
                                            gATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGcc                                                        <  2:948377/100‑1 (MQ=255)
                                             aTTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCa                                                       <  1:562576/100‑1 (MQ=255)
                                              tttCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAg                                                      >  2:2203726/1‑100 (MQ=255)
                                              tttCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAg                                                      <  1:1161912/100‑1 (MQ=255)
                                                tCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGc                                                     >  1:529914/1‑99 (MQ=255)
                                                tCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCt                                                    <  1:2104144/100‑1 (MQ=255)
                                                 cGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCtt                                                   >  1:1694897/1‑100 (MQ=255)
                                                  gCCGGTCGCCATATCGCGGTTAATATTTTTTTCTTCACGTGC‑A‑CGTACGGTGCCCGTGACCTCAATGCAGACCTCATTACGAAGTTCAGAGGCCAGCttt                                                  >  1:677124/1‑100 (MQ=255)
                                                  gCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCttt                                                  <  2:4067160/100‑1 (MQ=255)
                                                   ccGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTa                                                 >  1:2484468/1‑100 (MQ=255)
                                                     ggTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAAc                                               <  2:3399719/100‑1 (MQ=255)
                                                      gTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAAcg                                              <  2:1155793/100‑1 (MQ=255)
                                                      gTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAAcg                                              >  1:3465046/1‑100 (MQ=255)
                                                        cGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAAcgcg                                            >  2:2259018/1‑100 (MQ=255)
                                                          ccATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTGAAcgcg                                            >  2:491899/1‑98 (MQ=255)
                                                            atatCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCg                                        <  2:902835/100‑1 (MQ=255)
                                                             tatCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGc                                       <  1:2396273/100‑1 (MQ=255)
                                                              atCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCa                                      >  1:1558931/1‑100 (MQ=255)
                                                                cgcgGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGCCCTGAATGCAGAACTCATTAAGCAGTTCAAAGGCCCGCTTTAACGCGTCCGCACg                                    >  2:2355527/1‑100 (MQ=255)
                                                                 gcgGTTAATATTTTTTTCGTCACGCGC‑C‑CGTACGGTGCCCGTAACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGCCCGCACGa                                   >  2:2656956/1‑100 (MQ=255)
                                                                    gTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATcc                                <  1:3922494/100‑1 (MQ=255)
                                                                       aaTATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGa                             >  2:2024282/1‑100 (MQ=255)
                                                                        atatTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGAt                            >  2:3021393/1‑100 (MQ=255)
                                                                          atTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCg                          <  2:1278957/100‑1 (MQ=255)
                                                                          atTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCg                          <  2:1279701/100‑1 (MQ=255)
                                                                           tttttttCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCCGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGa                         >  2:1692606/1‑100 (MQ=255)
                                                                             tttttCGTCACGCGC‑A‑CGTACGGTGCCCGTGTCCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGaaa                       <  1:102825/100‑1 (MQ=255)
                                                                             tttttCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGaaa                       <  1:300047/100‑1 (MQ=255)
                                                                             tgtttCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGGCCGCACGATCCGGATCGaaa                       <  1:113921/98‑1 (MQ=255)
                                                                              ttttCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGaaaa                      <  2:2850803/100‑1 (MQ=255)
                                                                               tttCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGaaaaa                     >  1:878684/1‑100 (MQ=255)
                                                                                 tCGTCACGCGC‑A‑CGTACGGTGCCCGGGACCTGAACGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGAACCGGATCGAAAAATa                   <  1:3183759/100‑1 (MQ=255)
                                                                                  ggTCACGGGC‑ACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATAc                  >  2:41852/2‑100 (MQ=38)
                                                                                  ggTCACGGGC‑ACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATAc                  >  2:1642417/2‑100 (MQ=38)
                                                                                  ggTCACGGGC‑ACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATAc                  >  1:3219154/2‑100 (MQ=38)
                                                                                  cGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATAc                  >  1:3335356/1‑100 (MQ=255)
                                                                                  cGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGAGTCCGGACGATCAGGATCGAAAAATa                   >  1:1142083/1‑99 (MQ=255)
                                                                                   gTCACGGGC‑ACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATAcc                 >  1:237733/1‑100 (MQ=38)
                                                                                   gTCACGGGC‑ACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATAcc                 >  1:2483560/1‑100 (MQ=38)
                                                                                    tCACGGGC‑ACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCt                >  2:4060655/1‑100 (MQ=38)
                                                                                    tCACGGGC‑ACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGCCCGCACGATCCGGATCGAAAAATACCt                >  1:3833209/1‑100 (MQ=38)
                                                                                    tCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCt                <  1:2216696/100‑1 (MQ=255)
                                                                                     cACGGGC‑ACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTg               >  2:2600675/1‑100 (MQ=255)
                                                                                     cACGGGC‑ACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTg               >  1:7800/1‑100 (MQ=255)
                                                                                     cACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTg               <  1:4092077/100‑1 (MQ=255)
                                                                                       cgcgC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGCa             >  2:1413299/1‑100 (MQ=255)
                                                                                       acgggcaccGTAC‑GTGCGCGTGACCTGAATGCAGCACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGc              >  2:2186332/9‑100 (MQ=255)
                                                                                       acgggcaccGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGc              >  2:3267905/9‑100 (MQ=255)
                                                                                         cgc‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGCACg           >  2:2855296/1‑100 (MQ=255)
                                                                                               cGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGCACGATAc       <  2:4351082/100‑1 (MQ=255)
                                                                                               cGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGCACGATAc       <  2:803741/100‑1 (MQ=255)
                                                                                                 tACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGGGTCCGCACGATCCGGATCGAAAAAGACCTGCACGAtgc       >  1:2677704/1‑96 (MQ=255)
                                                                                                 tACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGCACGATAcc      <  1:1833539/99‑1 (MQ=255)
                                                                                                 tACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGCACGATACCt     >  2:1960304/1‑100 (MQ=255)
                                                                                                    ggTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGCACGATACCTTcg  >  2:4222828/1‑100 (MQ=255)
                                                                                                    |                                                                                                   
ACATCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATATTTTTTTCGTCACGCGC‑A‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGCACGATACCTTCG  >  NC_000913/1950203‑1950400

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑