| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,752,107:1 | +G | 15.4% | coding (116/975 nt) | yiaU → | putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,752,107 | 1 | . | G | 15.4% | 585.5 / 116.4 | 175 | coding (116/975 nt) | yiaU | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base . (68/80); new base G (9/18); total (77/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 187 total aligned reads displayed.
TTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTACCGTA > NC_000913/3752008‑3752206 | ttAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCaa < 2:3583811/100‑1 (MQ=255) aGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ata < 1:3948357/100‑1 (MQ=255) gTACCGGGAGTTAAAAATTATCTCGGTGATCGCTGCCAGTGCAAATAACAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCCACCTCCGCAA‑ctat > 1:1084796/1‑100 (MQ=255) acagggAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ata < 1:1424998/94‑1 (MQ=255) aCCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCt < 2:887850/100‑1 (MQ=255) cGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTg > 2:4054298/1‑100 (MQ=255) gAGTTAAAAATTATCTCGGTAATCTCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGc < 1:481080/98‑1 (MQ=255) gAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTg < 1:3372593/100‑1 (MQ=255) aGTTAAAAATTATCTCGGTAATCGCTGCGTGTGAAAATAACAGCCATGCCGCGACGGTACTTGGCATCGCAAAGGCCAACGTCAGCAA‑ATATCTTGc < 1:1853843/97‑1 (MQ=255) gTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAGATAT‑TTGCTGac < 2:4296305/100‑2 (MQ=255) gTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAGATAT‑TTGCTGac < 2:4316244/100‑2 (MQ=255) gTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGACCAACGTCAGCAA‑ATATCTTGCTGAt > 1:2184105/1‑100 (MQ=255) tAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAGATAT‑TTGCTGacgt < 2:4074396/100‑4 (MQ=255) tAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGAttt > 2:3660999/1‑100 (MQ=255) aaaaaTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAGATAT‑TTGCTGacgtt < 1:1281205/100‑5 (MQ=255) aaaaaTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGAtttt < 2:2690403/100‑1 (MQ=255) aaatTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAGATAT‑TTGCTGacgttg < 1:4230385/100‑6 (MQ=255) aaaaTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTg < 1:2617046/100‑1 (MQ=255) aaaaTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTg < 2:2263658/100‑1 (MQ=255) aaaaTTATCTCGGTAATCGCTGCCAGTGAAAATATAAGCAATGCCGCGACTGTACTTGGCATCGCACAGTCCAACGTCAGCAAGATAT‑TTGCTGacgttg < 1:3563355/100‑6 (MQ=255) aaaTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAGATAT‑TTGCTGacgttgg < 2:2334328/100‑7 (MQ=255) aaaTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAGATAT‑TTGCTGacgttgg < 2:3393473/100‑7 (MQ=255) aaTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAGATAT‑TTGCTGacgttggc < 1:3576582/100‑8 (MQ=38) aaTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGaa < 2:1058507/100‑1 (MQ=255) aTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTATTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAAt < 1:432462/100‑1 (MQ=255) aTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAGATAT‑TTGCTGacgttggcc < 2:1857516/100‑9 (MQ=38) aTTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAAt < 2:3754602/100‑1 (MQ=255) tATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACATCAGCAAGATAT‑TTGCTGacgttggcctg < 2:2126332/100‑11 (MQ=37) aTCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCaa < 1:170016/100‑1 (MQ=255) tcGGTAATCGCTGCCAGTTAAAATATCAGCCATTCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAg < 1:3445501/100‑1 (MQ=255) cGGTAATCGCTGCCAGTTAAAATAACAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAg > 1:3125963/1‑99 (MQ=255) cGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGt > 1:2900706/1‑100 (MQ=255) ttAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTgg < 1:2289759/99‑1 (MQ=255) aaTCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGt < 1:3180548/100‑1 (MQ=255) aaTCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGt < 1:3155145/100‑1 (MQ=255) aaTCACAGCCAGTGAATATATCAGTCACGCCGCAACTGTACTTGGTTTCGGATAGGCCAACGTCAGCAA‑GTATCTTGCTGCTTTTGAATCAAACGCGGGt < 1:2802295/100‑1 (MQ=255) aTCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGACTCAAAAGTggggt < 2:2983574/100‑3 (MQ=255) gCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGttt < 1:4192133/98‑1 (MQ=255) gCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCGTGCTGATTTTGAATCAAAAGTGGGTTTaa > 1:3458546/1‑100 (MQ=255) cTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTaaa > 2:3083590/1‑100 (MQ=255) cTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTaaa > 1:4099759/1‑100 (MQ=255) cTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTaaa < 2:3311681/100‑1 (MQ=255) tGCCAGTGTAAATATTTGCTATGCTGCGATTGTACTTGGTATTGAAGAGGAAATCGTCTGCAA‑ATATCTTGCTGATTTTGTATCAAAAGTGGGTTTa < 1:3083893/97‑1 (MQ=255) gCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAg > 2:4240713/1‑100 (MQ=255) cAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTc > 2:2329492/1‑100 (MQ=255) aGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTGTGAATCAAAAGTGGGTTTAAAAGTCt > 2:2187282/1‑100 (MQ=255) gTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCtt > 2:182026/1‑100 (MQ=255) tGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGTTTTTGAATCAAAAGTGGGTTTAAAAGTCtt < 1:2891888/99‑1 (MQ=255) tGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCttt < 2:2749662/100‑1 (MQ=255) gAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTg < 1:4091087/100‑1 (MQ=255) gAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTg < 2:155108/100‑1 (MQ=255) gAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTg > 1:680602/1‑100 (MQ=255) gAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTg < 2:666000/100‑1 (MQ=255) aaTATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGAcc < 2:3255597/100‑1 (MQ=255) tatCAGCCATGCCGCGACTGTACTTGGCATCGCACATGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGa > 2:3099311/1‑100 (MQ=255) tCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGaan < 2:3874436/100‑2 (MQ=255) cAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAacc < 1:2230303/100‑1 (MQ=255) cAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAacc < 2:4382157/100‑1 (MQ=255) aGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAacca > 2:857235/1‑100 (MQ=255) aGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAacca > 1:3003774/1‑100 (MQ=255) gCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAaccac > 2:83485/1‑100 (MQ=255) cATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCAccc > 1:3847171/1‑100 (MQ=255) cATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCAccc > 2:130136/1‑100 (MQ=255) cgcgACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCcagcag > 1:886386/1‑100 (MQ=255) gcgACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGc > 2:4291398/1‑100 (MQ=255) gcgACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGc < 2:3803992/100‑1 (MQ=255) gcgACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGc > 2:3736908/1‑100 (MQ=255) tGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATg < 2:3907694/100‑1 (MQ=255) gTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGc < 2:3342455/100‑1 (MQ=255) tACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCt > 2:1733057/1‑100 (MQ=255) aCTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTc < 1:1133508/100‑1 (MQ=255) aCTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTc > 1:241217/1‑100 (MQ=255) aCTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTc > 2:2352400/1‑100 (MQ=255) aCTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTc < 2:1234309/100‑1 (MQ=255) cTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTca > 1:637860/1‑100 (MQ=255) tGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTcaca > 2:1614948/1‑100 (MQ=255) cATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCt > 2:966928/1‑100 (MQ=255) cGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCtttt < 1:4373230/100‑1 (MQ=255) cacaGGCCAACGTCAGCAC‑ATATCTTGCTGCTTTTGACTCACAAGTGGGTTTAACAGTCTTTGTCCGAACCACCCGGCAGCTGATGCTCACGCCTTTTgg < 2:4126587/100‑1 (MQ=255) cacaGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACTGAACCACCCGGCAGCTGATGCTCACACCTTTTgg < 2:3925579/100‑1 (MQ=255) acaGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGc < 2:2459944/100‑1 (MQ=255) acaGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGc < 1:391216/100‑1 (MQ=255) aGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCAc < 2:3637207/100‑1 (MQ=255) attcaaaatCAGCAAGATAT‑TTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGCCCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCAc > 2:40294/9‑99 (MQ=37) ttcaaaatCAGCAAGATAT‑TTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACcg > 1:773050/8‑100 (MQ=38) tcaaaatCAGCAAGATAT‑TTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACcgc > 1:2468643/7‑100 (MQ=255) ccAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACcgc > 1:3143515/1‑100 (MQ=255) aatCAGCAAGATAT‑TTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGACACCGCGCTg > 1:4123628/3‑100 (MQ=255) tCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGtt < 2:1664544/100‑1 (MQ=255) cAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTa > 2:3579465/1‑100 (MQ=255) aGCAA‑ATATCTTGCTGATTTTTAATCTAAAGTGTGTTTAAAAGTCTTTGATCGAACCAGCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTAc < 1:3021115/100‑1 (MQ=255) aGCAA‑ATATCTTGCTGATTTTAAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTAc < 1:2769675/100‑1 (MQ=255) gCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTAcc > 2:328486/1‑100 (MQ=255) gCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTAcc > 1:2678708/1‑100 (MQ=255) gCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTAcc > 1:3193177/1‑100 (MQ=255) gCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTAcc > 2:295573/1‑100 (MQ=255) cAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTACCg < 2:2052534/100‑1 (MQ=255) aa‑aTATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTACCGt > 1:3850399/1‑100 (MQ=255) aa‑aTATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTACCGt > 1:916876/1‑100 (MQ=255) a‑aTATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTACCGTa < 1:4031184/100‑1 (MQ=255) | TTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAA‑ATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTACCGTA > NC_000913/3752008‑3752206 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |