New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 857633 =NA (NA)3 (0.020) 3/162 NT NA noncoding (18/98 nt) RIP79 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP79 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 4441401 = NA (NA)noncoding (9/98 nt) RIP335 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP335 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 177 total aligned reads displayed.

TAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGC  >  NC_000913/857537‑857726
                                                                                                |                                                                                               
tagtagAGGGATCGAGTATGTGATTATCCGTCACCCCGATACGGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCTCTACGCTTATc                                                                                              <  1:1329440/100‑1 (MQ=38)
tagtaAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATc                                                                                              <  2:1839365/100‑1 (MQ=255)
tagtaAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATc                                                                                              <  2:2501393/100‑1 (MQ=255)
  gtaAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAg                                                                                            <  2:3800490/100‑1 (MQ=255)
    aaaGGGATGGAGTAAGTGATTATCCGGCACCCCGTTACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAGATAGCCTGATGCGCTACGCGTATCAGGc                                                                                          <  1:3491805/100‑1 (MQ=38)
       gggATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                       >  2:419488/1‑100 (MQ=255)
        ggATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTAc                                                                                      >  2:1146458/1‑100 (MQ=255)
         gATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACg                                                                                     >  2:327213/1‑100 (MQ=255)
          aTCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGc                                                                                    <  1:2012318/100‑1 (MQ=255)
            cGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCGACGCAg                                                                                  <  1:2793542/100‑1 (MQ=255)
             gAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGt                                                                                 >  2:2129372/1‑100 (MQ=255)
             gAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGAGGCGCTACGCTTATCAGGCCTACACAGt                                                                                 >  1:734887/1‑100 (MQ=255)
               gTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑c                                                                              <  1:3340981/100‑1 (MQ=255)
                tAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑cc                                                                             <  2:1757928/100‑1 (MQ=255)
                  aGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑g                                                                          >  2:3340845/1‑100 (MQ=255)
                   gTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑Gc                                                                         <  2:3159862/100‑1 (MQ=255)
                    tccgatctcGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCa                                                                        <  1:2847726/92‑1 (MQ=255)
                    tGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCa                                                                        >  1:359989/1‑100 (MQ=255)
                     gATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCaa                                                                       <  1:3901443/100‑1 (MQ=255)
                     gATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCaa                                                                       >  1:2581117/1‑100 (MQ=255)
                       gtcgccGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAata                                                                     >  2:166493/5‑100 (MQ=255)
                       gccgccGTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAata                                                                     >  2:197272/5‑100 (MQ=25)
                         cgccGTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAatata                                                                   >  1:30456/3‑100 (MQ=25)
                         cgccGTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAata                                                                     >  2:1297154/3‑98 (MQ=25)
                          tCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCTTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAatatat                                                                  >  2:4368976/1‑100 (MQ=255)
                          tCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAatatat                                                                  >  1:2806041/1‑100 (MQ=255)
                          gccGTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTCCGCAGTA‑CCT‑GCAatatat                                                                  >  2:1630347/2‑100 (MQ=25)
                          gccGTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAatatat                                                                  >  2:255433/2‑100 (MQ=25)
                          gccGTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAatatat                                                                  >  2:636454/2‑100 (MQ=25)
                          gccGTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAatatat                                                                  >  2:2340548/2‑100 (MQ=25)
                           ccGTCACCCCGATACTGACGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAatatat                                                                  <  1:4023052/99‑1 (MQ=255)
                           ccGTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATAtt                                                                 >  1:2240729/1‑100 (MQ=25)
                           ccGTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATAtt                                                                 >  2:3793238/1‑100 (MQ=25)
                           ccGTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATAtt                                                                 >  1:1548498/1‑100 (MQ=25)
                            cGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCaagatcgga                                                                >  2:2847742/1‑93 (MQ=255)
                            cGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTg                                                                <  2:1708901/100‑1 (MQ=255)
                            cGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTg                                                                >  2:3849247/1‑100 (MQ=255)
                            cGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTg                                                                <  1:3749180/100‑1 (MQ=255)
                            cGTCACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTg                                                                >  1:1396939/1‑100 (MQ=25)
                             gTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGAAAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGa                                                               >  1:2353257/1‑100 (MQ=255)
                              tCACCTGGATACTGTCGGGGTGACGGCGGCGGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATAtt                                                                 <  1:4222034/97‑1 (MQ=255)
                               cACCCCGACAGTATCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAAt                                                             >  1:1050970/1‑100 (MQ=25)
                                 ccccGTTACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCt                                                           <  2:3686222/100‑1 (MQ=255)
                                 ccccGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTG‑CCT‑GCAATATATTGATTc                                                            >  1:4244474/1‑99 (MQ=255)
                                 ccccGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCt                                                           >  2:2068251/1‑100 (MQ=255)
                                    cGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGc                                                         <  1:1374640/99‑1 (MQ=255)
                                    cGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCa                                                        <  2:2373261/100‑1 (MQ=255)
                                      aTACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAgg                                                      <  2:3757932/100‑1 (MQ=255)
                                      aTACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAgg                                                      >  1:3947287/1‑100 (MQ=255)
                                           gTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACttt                                                 >  2:90163/1‑100 (MQ=255)
                                             cGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGt                                               <  1:4310527/100‑1 (MQ=255)
                                             cGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGt                                               >  2:4036538/1‑100 (MQ=255)
                                              ggggTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑TCAATATATTGAATCTGCAGGACTTTGTa                                              <  1:419486/100‑1 (MQ=255)
                                              ggggTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCCGGACTTTGTa                                              >  2:1568811/1‑100 (MQ=255)
                                              ggggTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTa                                              <  1:1121478/100‑1 (MQ=255)
                                              ggggTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTa                                              <  1:956307/100‑1 (MQ=255)
                                               gcgTGACGGCGGCTGATGACAACTGCAAAATAGCCTGATGCGCTACGCTTATCAGCACTACGCAGTA‑TCT‑GCAATATATTGAATCTGCAGGACTTTg                                                <  1:4120619/95‑1 (MQ=25)
                                                ggTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAgg                                            >  2:3918343/1‑100 (MQ=255)
                                                  tGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGcc                                          <  2:4351162/100‑1 (MQ=255)
                                                   gACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCg                                         >  1:697334/1‑100 (MQ=255)
                                                         ggcTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAg                                   >  2:4078485/1‑100 (MQ=255)
                                                         ggcTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAg                                   <  1:1684264/100‑1 (MQ=255)
                                                          gcTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAgg                                  <  1:1294622/100‑1 (MQ=255)
                                                           cTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCGACGCAGTA‑CCT‑GCAAGATATTGAAGCTGCAGGACTGTGGAGGCCGGATAAGGc                                 <  1:1468963/100‑1 (MQ=21)
                                                             gatgaCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGt                               >  1:1653023/1‑100 (MQ=255)
                                                              atgaCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGtt                              >  1:1705232/1‑100 (MQ=255)
                                                              atgaCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGAATAAGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCTGATAAg                                   >  1:1786078/1‑95 (MQ=21)
                                                                gaCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTaa                            >  1:2833897/1‑100 (MQ=255)
                                                                 aCAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAc                           <  2:2457931/100‑1 (MQ=255)
                                                                  cAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAcg                          >  2:2085820/1‑100 (MQ=255)
                                                                  cAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAcg                          >  2:3587754/1‑100 (MQ=255)
                                                                  cAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTCAATCTGCAGGACTTTGTAGGCCGGATAAGACGTTAAcg                          >  1:713241/1‑100 (MQ=255)
                                                                   aaaTGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAcgc                         >  2:3142490/1‑100 (MQ=255)
                                                                    aaTGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAcgcc                        <  2:2154993/100‑1 (MQ=255)
                                                                    aaTGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAcgcc                        <  2:259165/100‑1 (MQ=255)
                                                                     aTGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAcgccg                       <  2:117856/100‑1 (MQ=255)
                                                                     aTGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGCTAAcgcc                        >  1:1161774/1‑99 (MQ=255)
                                                                      tGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAAcgccgc                      >  2:3609798/1‑100 (MQ=255)
                                                                       gCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCa                     >  1:1989307/1‑100 (MQ=255)
                                                                       gCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCa                     <  1:3177686/100‑1 (MQ=255)
                                                                         aaaaTAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATc                   >  2:2031076/1‑100 (MQ=255)
                                                                         aaaaTAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATc                   <  1:166492/100‑1 (MQ=255)
                                                                          aaaTTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAG‑ATT‑GCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATGCGGCGTGAAcgccttatcc                  <  2:558435/100‑7 (MQ=18)
                                                                          aaaTTGCCTGATGCGCTACGCTTATCAGGCCTACAC‑GTATCCT‑GCAATATATTGAATTTGCAGGTTTTTGTAGGCCGGATGCGGCGTGAAcgccttatcc                  <  1:3248549/100‑7 (MQ=18)
                                                                          aaaTAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCa                  >  1:1070752/1‑100 (MQ=255)
                                                                           aaTTGCCTGATGCGCTACGCTTATCATGCCTACGAGGAT‑GGT‑GCAATATATTGAATTTAAGCGATTCTGTAGGCCGGATGCGGCGTGAAcgccttatccg                 <  1:2911602/100‑8 (MQ=21)
                                                                             tAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGc               <  2:272782/100‑1 (MQ=255)
                                                                             tAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGc               <  1:195166/100‑1 (MQ=255)
                                                                              ggcctgataagcgtagcgCATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCa              <  1:473355‑M1/82‑1 (MQ=255)
                                                                               gcctgataagcgtagcgCATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCAt             <  1:4144109‑M1/83‑1 (MQ=255)
                                                                               gCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCAt             >  1:1626729/1‑100 (MQ=255)
                                                                                ccTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTAAACGCCGCATCAGGCAtt            <  1:327212/100‑1 (MQ=255)
                                                                                 cTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTa           >  2:4276016/1‑100 (MQ=255)
                                                                                 cTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTa           >  1:3247014/1‑100 (MQ=255)
                                                                                  tGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTaa          >  2:1465328/1‑100 (MQ=255)
                                                                                   gATGCGCTGCGCTTATCAGGCCTACTGGGTG‑AGTGGCAATATGTTGAATTTGCACGATCTTGTAGGCCGGATGCGGCGTAAACGCCTTATCAGGcctaca          <  1:789250/100‑6 (MQ=18)
                                                                                   gATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAAc         >  2:408876/1‑100 (MQ=255)
                                                                                    aTGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACa        <  2:2911684/100‑1 (MQ=255)
                                                                                       cgcTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAg     >  2:1556090/1‑100 (MQ=255)
                                                                                          tACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAgcgc  >  1:4058324/1‑100 (MQ=255)
                                                                                                |                                                                                               
TAGTAAAGGGATCGAGTAAGTGATTATCCGTCACCCCGATACTGTCGGGGTGACGGCGGCTGATGACAAATGCAAAATAGCCTGATGCGCTACGCTTATCAGGCCTACGCAGTA‑CCT‑GCAATATATTGAATCTGCAGGACTTTGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCATTAACAAAGCGC  >  NC_000913/857537‑857726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.