| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,261,359 | T→A | 18.7% | intergenic (+53/‑310) | yjbM → / → dusA | uncharacterized protein/tRNA‑dihydrouridine synthase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,261,359 | 0 | T | A | 18.7% | 498.0 / 96.8 | 208 | intergenic (+53/‑310) | yjbM/dusA | uncharacterized protein/tRNA‑dihydrouridine synthase A |
| Reads supporting (aligned to +/- strand): ref base T (76/92); new base A (19/20); total (95/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 218 total aligned reads displayed.
CTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTGGATTGTTTA > NC_000913/4261260‑4261458 | cTTCTAAATTAATTTATGATTTGTTCGGGGTAAAATCGGAGAAATAATATGTGAAGTTCTACGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAAtatt < 1:1387365/100‑1 (MQ=255) tCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAAtattta < 1:4181063/100‑1 (MQ=255) aaaTTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTg < 1:1038170/100‑1 (MQ=255) aattaattTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTgg < 1:516957/100‑1 (MQ=255) attcattTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAAGCATTATAT‑AAAACGACTCAAtatttcatgg > 1:3432122/1‑94 (MQ=255) attaattTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTggg > 2:1758350/1‑100 (MQ=255) aattTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGAACCCAATAAATATTGGGtcc < 2:687256/100‑3 (MQ=39) tATGGTTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCtttt < 1:240231/100‑1 (MQ=255) aTGATTTGTTCGGGGTTAAATCGGAGAGATAATATGTGAAGTTCTTCGATAGTATGGAAGGCTTTATAT‑AAAAGAACCCAATAAATATTGGGTCCtttta < 1:2351147/100‑2 (MQ=37) tGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCtttttt < 2:3799504/100‑1 (MQ=255) gATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCTATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTtc < 1:1144095/100‑1 (MQ=255) gATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTtc < 1:660810/100‑1 (MQ=255) gATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTtc < 2:2138617/100‑1 (MQ=255) tttGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTtctc < 2:840665/100‑1 (MQ=255) tttGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTtctc < 2:1687325/100‑1 (MQ=255) ttGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGAACCCAATAAATATTGGGTCCttttatataa < 2:3533432/100‑7 (MQ=25) tGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTa < 1:3894819/100‑1 (MQ=255) tGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTa < 2:3844237/100‑1 (MQ=255) tGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTa < 1:1223349/100‑1 (MQ=255) gTTCGGGGTTAAATCGGAGTAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTAt > 2:1981689/1‑100 (MQ=255) gTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTAt > 2:2829015/1‑100 (MQ=255) gTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTAt > 2:459722/1‑100 (MQ=255) ttCGGTGTTAAATCGGAGAAATAATATGTAAAGGTATTCGATAGTATGGAAGTCATTATAT‑AAAAGAACCCAATAAATATTGGGTCCttttatataatg < 1:1861033/99‑9 (MQ=18) ttCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATc < 2:2434754/100‑1 (MQ=255) tCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATATAAAAAGAACCCAATAAATATTGGGTCCttttatataatgc < 1:3452187/100‑10 (MQ=18) tCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGAACCCAATAAATATTGGGTCCttttatataatgcc < 1:3809902/100‑11 (MQ=21) gggTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATa > 1:3057428/1‑100 (MQ=255) gggTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATa < 2:3210406/100‑1 (MQ=255) ggTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATAc < 1:80365/100‑1 (MQ=255) ggTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATAc > 2:3932481/1‑100 (MQ=255) aaTCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTa > 1:3740934/1‑100 (MQ=255) aTCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAg > 2:3067505/1‑100 (MQ=255) tCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAg > 2:881247/1‑99 (MQ=255) tCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGc < 1:4015327/100‑1 (MQ=255) tCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGc > 2:2218667/1‑100 (MQ=255) cGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTAtcgaag > 2:277656/1‑95 (MQ=255) cGGAGAAATAATATGTGAAGTTATTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCa > 1:2449603/1‑100 (MQ=255) ggAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAg < 2:4070836/100‑1 (MQ=255) gagaAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAgg < 2:1778312/100‑1 (MQ=255) aataatATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGgaga < 1:4043245/100‑1 (MQ=255) ataataTGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGat > 1:284280/1‑100 (MQ=255) ataataTGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGat > 2:3184598/1‑100 (MQ=255) taataTGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGata > 2:2511996/1‑100 (MQ=255) taataTGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGata < 2:2024437/100‑1 (MQ=255) taataTGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGata < 2:793704/100‑1 (MQ=255) aataTGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGatat < 2:3965149/100‑1 (MQ=255) atatGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGatata < 1:168043/100‑1 (MQ=255) atatGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGatata < 2:2550986/100‑1 (MQ=255) tttgAAGTTCTTCAATAGTATGGAAGGCATTATAT‑AAAAGGAGCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCa > 2:2983304/3‑100 (MQ=255) gtgAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCAc > 2:2267460/1‑100 (MQ=255) tgAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCAcc < 2:3379784/100‑1 (MQ=255) gAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCa > 1:4237871/1‑100 (MQ=255) gTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCagag > 2:4221390/1‑100 (MQ=255) cttcGATAGTATGAAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGttt < 2:3483225/100‑1 (MQ=255) aTAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATCCTATTAGCCGTGAGATATATCACCAGAGTTTAAtgt > 2:56475/1‑100 (MQ=255) tAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAAtgtg < 2:2782944/100‑1 (MQ=255) aGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAAtgtgt < 2:1954336/100‑1 (MQ=255) aGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAAtgtgt < 1:1804309/100‑1 (MQ=255) aGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAAtgtgt < 1:4058218/100‑1 (MQ=255) gTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAAtgtgtg > 2:2187681/1‑100 (MQ=255) gTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAAtgtgtg > 1:3261667/1‑100 (MQ=255) aTGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGAt > 2:1003329/1‑100 (MQ=255) aTGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGAt < 2:1501025/100‑1 (MQ=255) ggAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGAttt > 1:457665/1‑100 (MQ=255) aaGGCATTATTT‑ATCAGGACCCAATATGTATTGGGTTCTTTTTTCTCTATCACTACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGAttttt < 1:320650/100‑1 (MQ=255) aGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGAtttttt > 2:768181/1‑100 (MQ=255) ggCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGTAGGGAGATATATCACCAGAGTTTAATGTGTGAtttttt < 1:2702476/99‑1 (MQ=255) ggCATTATAT‑AAAAGGACCCAAGATTTAGTGGGTTCTTTTTCCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTttta < 2:1435896/100‑1 (MQ=255) tgatagagaaaaaaGAACCCAATAAATATTGGGTCCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTttta > 1:2499827/11‑100 (MQ=21) gCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTtttat < 2:128844/100‑1 (MQ=255) aTTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTtttattt < 2:3587008/100‑1 (MQ=255) aTTATAT‑AAAAGGACCCAATATATATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCATCAGAGTTTAATGTGTGATGTttgattt > 1:1533882/1‑100 (MQ=255) tagagaaaaaaGAACCCAATAAATATTGGGTCCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTtttattt > 1:192596/8‑100 (MQ=25) tatat‑aAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTttatttat > 2:1920768/1‑100 (MQ=255) gagaaaaaaGAACCCAATAAATATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGATTTTAATGTGTGATTTTttatttat > 1:1094815/6‑100 (MQ=37) atat‑aAAAGGACCCAATATTTATTGGGCTCTTTCTTCTCTATAAAAACTATTAACAGGGCGATATATCACCCGCCTTCAACGTGTGATTTTTTCTTtctc > 1:1495080/1‑100 (MQ=255) gaaaaaaGAACCCAATAAATATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTAtcg > 2:1002464/4‑100 (MQ=38) t‑aAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTAtcgtc < 2:3934822/100‑1 (MQ=255) aaaaaGAACCCAATAAATATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCAGCAGAGTTTAATGTGTGATTTTTTGTTTAtcgtc > 2:2594037/2‑100 (MQ=38) aaaaaGAACCCAATAAAAATTGGGTTGTTTTTTCTCTATCAATGCTTTTAACTGGGAGATATATTAGTAGAGTTGGATGTGAGATTTgttaattagttta > 1:4118727/2‑95 (MQ=255) agaaCCCAATAAATATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAAc > 2:1633751/4‑100 (MQ=255) ggACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAAcc > 1:221961/1‑100 (MQ=255) gaaCCCAATAAATATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAAcc > 2:3354621/3‑100 (MQ=255) gaaCCCAATAAATATTGGGTTC‑TTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCt > 2:1603767/3‑100 (MQ=255) aCCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTg > 2:4153577/1‑100 (MQ=255) aCCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTg < 1:2792268/100‑1 (MQ=255) aCCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTg < 1:2113552/100‑1 (MQ=255) aCCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTg < 2:1576634/100‑1 (MQ=255) cccAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTgg < 2:2885465/100‑1 (MQ=255) ccAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTGGa > 1:591733/1‑100 (MQ=255) ccAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTGGa < 1:2478593/100‑1 (MQ=255) ccAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTGGa > 2:541320/1‑100 (MQ=255) ccAATAATTATTGAGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGCTATATCACCAGAGATTAATGTGTGATTTTTTATTTATCGTCGAATCt > 1:1728418/1‑97 (MQ=255) cAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTg > 1:1249463/1‑97 (MQ=255) cAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTGGAt < 1:1556131/100‑1 (MQ=255) atatTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTGGAtt > 1:4222363/1‑99 (MQ=255) atttattGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTGGATTGtt < 1:3029050/100‑1 (MQ=255) atttattGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTGGATTGtt < 1:1002491/100‑1 (MQ=255) tttattGGGTTCTTTTTTCTCTATCAATACTATTAGCTGTGATATATATCACGAGAGTTTAATGTTTGATTTTTTATTTATCGTCTAACCTGGATTGttt < 1:970174/100‑1 (MQ=255) tttattGGGTTCTTTTTTCTCTATCAATACTATGAGCAGGGAGATATATCTCCAGAGTTTAATGTGTTATTTGTTATTTATCGTCGAACCTTTATTGttt < 1:361572/100‑1 (MQ=255) | CTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAATATGTGAAGTTCTTCGATAGTATGGAAGGCATTATAT‑AAAAGGACCCAATATTTATTGGGTTCTTTTTTCTCTATCAATACTATTAGCAGGGAGATATATCACCAGAGTTTAATGTGTGATTTTTTATTTATCGTCGAACCTGGATTGTTTA > NC_000913/4261260‑4261458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |