| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,705,984 | T→G | 19.8% | intergenic (‑194/+114) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,705,984 | 0 | T | G | 19.8% | 484.1 / 114.1 | 182 | intergenic (‑194/+114) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base T (64/82); new base G (34/2); total (98/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.85e-01 | |||||||||||
Only 100 of 186 total aligned reads displayed.
TTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCT > NC_000913/3705885‑3706083 | tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCAGATGCGGCGTTAACGCCTTATc < 1:1338895/100‑1 (MQ=255) gcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATcc > 1:2454518/1‑100 (MQ=255) gcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATcc > 2:3239895/1‑100 (MQ=255) gcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATcc < 2:2684741/100‑1 (MQ=255) gATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGcc < 2:3080071/100‑1 (MQ=255) gATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGcc < 2:1359154/100‑1 (MQ=255) gATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGcc < 1:142860/100‑1 (MQ=255) aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCt < 1:1020673/100‑1 (MQ=255) aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCt < 2:2946884/100‑1 (MQ=255) aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGcat < 1:1487344/100‑3 (MQ=37) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑a > 2:1910041/1‑100 (MQ=255) tGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAAt > 1:641686/1‑100 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCg > 2:1624802/1‑100 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCg < 2:1273863/100‑1 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc > 1:2278993/1‑100 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc < 1:2254298/100‑1 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc < 2:1839423/100‑1 (MQ=255) gagGCACAGCGCCACCGGGTATACAGATTGTTGGCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAATGCCTTATCCGGCCTAC‑AAAATCGTGCaaa > 1:2007920/1‑100 (MQ=255) ggCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAAtt < 1:435054/100‑1 (MQ=255) gCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTc < 1:3087489/100‑1 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACATAGTGCGGTTCGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCa < 1:2346787/100‑1 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCa < 1:3320623/100‑1 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCa > 1:3197023/1‑100 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCa < 2:1275069/100‑1 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCa < 2:1583771/100‑1 (MQ=255) caGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAAt > 1:956647/1‑100 (MQ=255) caGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAAt < 1:2244480/100‑1 (MQ=255) gcgcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATAc > 2:1394429/1‑100 (MQ=255) ccACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACAtt > 2:457736/1‑100 (MQ=255) cACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTg < 2:1030050/100‑1 (MQ=255) aCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGc < 2:1153347/100‑1 (MQ=255) aCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGc < 2:1203671/100‑1 (MQ=255) gTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑At < 2:3143498/100‑1 (MQ=255) tatataGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAATTCGTGCAAATTCAATACATTGCA‑GA‑At‑t < 2:1898055/100‑1 (MQ=255) aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTc < 1:1219074/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑g < 2:196868/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑g < 2:1786180/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑g < 2:1507786/100‑1 (MQ=255) gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTa < 1:2238269/100‑1 (MQ=255) gcataaaCAAAGCGCACTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATAGCA‑GA‑AT‑T‑TTC‑‑GTAgg > 1:1956472/7‑100 (MQ=18) tgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGc > 2:1023265/1‑100 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGcc < 2:1692687/100‑1 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGcc > 1:1108108/1‑100 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGcc > 1:2320545/1‑100 (MQ=255) ttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCt < 1:527850/100‑1 (MQ=255) tgACAGAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AGAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTg < 1:1509216/100‑1 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTg < 1:2948747/100‑1 (MQ=255) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGa > 1:2210422/1‑100 (MQ=255) aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGAt < 2:160962/100‑1 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATa > 2:1632114/1‑100 (MQ=255) aaGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAg > 2:2904942/1‑100 (MQ=255) gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCg < 2:1547524/100‑1 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCgg > 1:1679104/1‑100 (MQ=255) gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGa > 1:3065301/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAgcg < 1:1908111/100‑1 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCa > 1:101451/1‑100 (MQ=255) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGCA‑AT‑CT‑C‑CGT‑‑GTAGGCCTGATAAGCGTAGCGCAt > 1:2916067/8‑100 (MQ=18) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑A‑AT‑C‑TCCGTGTAGGCCTGATAAGCGTAGCGCAt > 1:1806361/8‑100 (MQ=18) cttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGCA‑TG‑AG‑C‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCAt > 2:2597289/8‑100 (MQ=17) gTTTATGCCGGATGCGGCGTTAACGCCTTATCGGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AG‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCa > 1:3052585/1‑98 (MQ=255) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATc > 1:395965/1‑100 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCa < 2:1108111/100‑1 (MQ=255) tgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑T‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCa > 2:2177841/6‑100 (MQ=14) tgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACCTGCAAATTCAATATATTGCA‑GG‑AT‑A‑CGT‑‑GTAGGCCTGATAAGCGTAGCGCATCa > 2:3311802/6‑100 (MQ=18) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg > 1:2736833/1‑100 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAACACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg > 1:2145762/1‑100 (MQ=255) gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCATAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑T‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 1:815794/5‑100 (MQ=17) taggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATCC‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:2566539/4‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCAGGG‑AC‑T‑AT‑‑‑GTAGGCCTGATAAGCATAGCGCATCAgg > 1:2430016/4‑100 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATCC‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2545684/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGAT‑CG‑AT‑C‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:551912/3‑100 (MQ=21) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCAGGG‑AC‑T‑AT‑‑‑GTAGGCCTGATAAGCATAGCGCATCAGGc > 1:2687291/3‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GG‑AG‑C‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2162779/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGCA‑GAGAT‑C‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2334551/2‑100 (MQ=17) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATC‑TGCAAATTCAACAAATTGC‑‑GA‑ATCC‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 1:1802484/1‑100 (MQ=17) ccggataaggcgTTCACGCCGCATCCGGCCTAT‑AAAACTGTGCAAATTCAATATATTGCA‑GG‑AA‑A‑CAC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGCagt > 1:967322/9‑98 (MQ=18) ccggataaggcgTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑AC‑C‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 1:2438299/9‑98 (MQ=18) ccGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtt > 1:1042575/1‑100 (MQ=255) ngataaggcgTTCACGCCGCATCCAGCCTAC‑AAAATTGTGCAAAATCAATGGATTGCA‑CA‑GC‑T‑AGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagatt > 1:124068/7‑96 (MQ=37) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑AT‑CCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttgc > 1:1090501/7‑98 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGCA‑GG‑AA‑A‑CAC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGCAgttt > 2:2270858/7‑100 (MQ=18) ggataaggcgTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑CT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtttt > 1:478693/7‑100 (MQ=17) gATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAttttt < 2:382968/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtttttn < 1:869271/100‑2 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:2007934/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:139066/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:3018944/100‑1 (MQ=255) aaCGCCTTATCCGGCCTAC‑AAAATCGTGCAACTTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑ATAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa > 1:2800636/1‑99 (MQ=255) aCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATTCATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 1:1531702/100‑1 (MQ=255) aCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 1:700750/100‑1 (MQ=255) cGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCa > 2:1990075/1‑100 (MQ=255) cGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCa < 2:644144/100‑1 (MQ=255) gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg < 2:522723/100‑1 (MQ=255) gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg < 1:2376126/100‑1 (MQ=255) gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg < 2:1659053/100‑1 (MQ=255) ccTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTCGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGt > 2:2811866/1‑100 (MQ=255) ccTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGt > 2:766982/1‑100 (MQ=255) cTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTc > 2:2402876/1‑100 (MQ=255) ttATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCt < 2:3262999/100‑1 (MQ=255) ttATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCt < 2:2114964/100‑1 (MQ=255) | TTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCT > NC_000913/3705885‑3706083 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |