BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2837464	NA (NA)	4 (0.040)	3/162	NT	NA	intergenic (‑39/+114)	hypF/hydN	carbamoyl phosphate phosphatase and [NiFe] hydrogenase maturation protein/formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit
*	?	NC_000913	= 2837491	NA (NA)	4 (0.040)	3/162	NT	NA	noncoding (27/27 nt)	REP196 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP196 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 156 total aligned reads displayed.

ACGCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAAC  >  NC_000913/2837367‑2837562

 cGCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgcc                                                                                                  <  2:2664565‑M1/100‑4 (MQ=255)

 cGCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgcc                                                                                                  <  2:2614133‑M1/100‑4 (MQ=255)

   cccTTCACTTTGCCACGAATACGCAGTTGGACACCGCCAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccgg                                                                                                >  2:3069691‑M1/1‑95 (MQ=255)

   cccTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccgg                                                                                                <  2:2051366‑M1/100‑6 (MQ=255)

   cccTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccgg                                                                                                <  2:335470‑M1/100‑6 (MQ=255)

    ccTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTTTCTTTTTTTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTtccgga                                                                                               >  1:807496‑M1/1‑94 (MQ=255)

    ccTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccgga                                                                                               >  1:120632‑M1/1‑94 (MQ=255)

     cTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGac                                                                                              <  2:521914/100‑1 (MQ=255)

     cTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGac                                                                                              <  1:2020097/100‑1 (MQ=255)

       gCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGacac                                                                                            <  2:61200/100‑1 (MQ=255)

        cACTTTGCCACGAATATGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACg                                                                                           <  1:2527080/100‑1 (MQ=255)

          cTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACg                                                                                           >  1:1842651/1‑98 (MQ=255)

           tttGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACa                                                                                        >  1:1628242/1‑100 (MQ=255)

            ttGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTCAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAg                                                                                       <  1:509369/100‑1 (MQ=255)

              gCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCg                                                                                     >  2:1703989/1‑100 (MQ=255)

                cACGAATACGCAGTTGGACACCGCAAGATGTGTTTTATGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTc                                                                                   >  2:2405912/1‑100 (MQ=255)

                 aCGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCg                                                                                  <  1:258756/100‑1 (MQ=255)

                 aCGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCAGTGAGTTATTCCCGCCAGCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCg                                                                                  <  1:2362955/100‑1 (MQ=255)

                  cGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGc                                                                                 <  2:2252655/100‑1 (MQ=255)

                       aCGCAGTTGGACACCGCAAGATGTGTTTTTTGCTATTGATTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCG                                                                            >  2:1518956‑M2/1‑100 (MQ=255)

                        cGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGG                                                                           <  2:3376650‑M2/100‑1 (MQ=255)

                         gCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGC                                                                          >  1:2292086‑M2/1‑100 (MQ=255)

                         gCAGTTGCACACCCCAAAATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCg                                                                                  <  2:3372463/92‑1 (MQ=255)

                          cAGTTGGACACCGCAAGATGTGTTTTTTTCTATTTATTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCCTCCGGCa                                                                         <  1:1360522‑M2/100‑2 (MQ=255)

                           aGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCag                                                                        >  1:3318191‑M2/1‑98 (MQ=255)

                             ttGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTc                                                                      <  2:2573127/100‑1 (MQ=255)

                              tGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccggatgcgacgctgtcgtgtccggcagggc                                                                     <  1:1354701‑M1/100‑33 (MQ=255)

                                gACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcaca                                                                   <  2:2351416/100‑1 (MQ=255)

                                gACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcaca                                                                   <  2:143449/100‑1 (MQ=255)

                                 acacCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccggatgcgacgctgtcgtgtccggcagggcggg                                                                  <  1:2328965‑M1/100‑36 (MQ=255)

                                  cacCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAgg                                                                 <  2:3149781/100‑1 (MQ=255)

                                   acCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGt                                                                >  2:282174/1‑100 (MQ=255)

                                    ccGCAAGATGTTTTTTTCGCTATGGAGTGATACCCGCCATCATGAATGGCGTAACCCGGCCTGCCGGAAACGACAGCGCCGCATCCGGCAGTcaca                                                                   <  1:2731339/96‑1 (MQ=255)

                                    ccGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTc                                                               <  2:834220/100‑1 (MQ=255)

                                    ccGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTc                                                               >  2:453273/1‑100 (MQ=255)

                                    ccGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTc                                                               >  1:3267672/1‑100 (MQ=255)

                                        aaGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCg                                                           <  1:2890238/100‑1 (MQ=255)

                                         aGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTCACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGCCACAGGTCGGCGa                                                          >  1:2034961/1‑100 (MQ=255)

                                           aTGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATa                                                        <  2:103738/100‑1 (MQ=255)

                                            tgtgTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑c                                                      >  2:366558/1‑100 (MQ=255)

                                            tgtgTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑c                                                      >  2:2744738/1‑100 (MQ=255)

                                             gtgtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑cc                                                     >  2:2936355/1‑100 (MQ=255)

                                              tgtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑ccg                                                    >  2:1680336/1‑100 (MQ=255)

                                               gtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACCCGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGTTA‑ccgc                                                   >  2:2286454/1‑100 (MQ=255)

                                               gtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCCTCCGGCAGTCACAGGTCGGCGATA‑ccgc                                                   >  1:1358297/1‑100 (MQ=255)

                                               gtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑ccgc                                                   >  1:1183491/1‑100 (MQ=255)

                                               gtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑ccgc                                                   >  2:1702294/1‑100 (MQ=255)

                                               gtTTTTTGCCATTGAGTTATTACCGCCATCATGAATTGCGTAACTCGCCCTGCCGGACACGACAGCGTCGCATCCGACAGTCACAGGTCGGCGATA‑ccgc                                                   >  1:390210/1‑100 (MQ=255)

                                                ttttttGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑ccgcc                                                  <  1:1637962/100‑1 (MQ=255)

                                                   tttGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑ccgcccgc                                               <  2:465892/100‑1 (MQ=255)

                                                   tttGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑ccgcccgc                                               <  2:1733630/100‑1 (MQ=255)

                                                    ttGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCt                                              >  1:1019946/1‑100 (MQ=255)

                                                     tGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTc                                             <  1:939258/100‑1 (MQ=255)

                                                     tGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTc                                             <  1:331338/100‑1 (MQ=255)

                                                         aTTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTa                                         <  2:2656277/100‑1 (MQ=255)

                                                          ttGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTAt                                        >  1:2461799/1‑100 (MQ=255)

                                                             aGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCt                                     >  1:923195/1‑100 (MQ=255)

                                                             aGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCt                                     >  1:1160462/1‑100 (MQ=255)

                                                             aGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCt                                     <  1:1127721/100‑1 (MQ=255)

                                                              gTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTa                                    <  2:890069/100‑1 (MQ=255)

                                                                tATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACg                                  >  2:2087024/1‑100 (MQ=255)

                                                                tATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACg                                  >  2:1368747/1‑100 (MQ=255)

                                                                tATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACg                                  <  1:2653093/100‑1 (MQ=255)

                                                                  ttCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAGCCGCCC‑CTCCGTATTCTACGaa                                >  1:2804133/1‑100 (MQ=255)

                                                                  ttCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGaa                                >  2:1252085/1‑100 (MQ=255)

                                                                    cccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAata                              >  1:703351/1‑100 (MQ=255)

                                                                     ccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAatat                             >  1:1281980/1‑100 (MQ=255)

                                                                     ccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAatat                             >  1:130202/1‑100 (MQ=255)

                                                                          atcatGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCg                        >  1:3134636/1‑100 (MQ=255)

                                                                          atcatGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCg                        <  2:577555/100‑1 (MQ=255)

                                                                           tcatGAATTGCGTACCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCgg                       <  1:1926894/100‑1 (MQ=255)

                                                                            catGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCggg                      <  2:120633/100‑1 (MQ=255)

                                                                            catGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCggg                      >  2:230541/1‑100 (MQ=255)

                                                                            catGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCggg                      <  2:2297386/100‑1 (MQ=255)

                                                                             atGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGa                     <  1:1523368/100‑1 (MQ=255)

                                                                             atGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGa                     >  2:441845/1‑100 (MQ=255)

                                                                             atGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAAGATTTCCgg                       >  1:878813/1‑98 (MQ=255)

                                                                              tGAGTTGCGTAACCCGCCCTGCCGGACGCGAGAGCGTCGTATCGGGCAGTCACAGGTCGGCGATA‑CCCACCACTCCGTATTCTCCGAATATTTGCg                        >  1:318671/1‑96 (MQ=255)

                                                                              tGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGaa                    >  2:299780/1‑100 (MQ=255)

                                                                               gAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAAt                   >  2:2897541/1‑100 (MQ=255)

                                                                                   tGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCt               <  1:3194272/100‑1 (MQ=255)

                                                                                   tGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGCCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACCAATATTTCCGGGAATTCCt               >  1:731276/1‑100 (MQ=255)

                                                                                    gCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCtt              >  2:618626/1‑100 (MQ=255)

                                                                                     cGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCttt             >  2:1774671/1‑100 (MQ=255)

                                                                                     cGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCttt             <  1:2794761/100‑1 (MQ=255)

                                                                                     cGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTAACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCttt             >  1:2878338/1‑100 (MQ=255)

                                                                                      gTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTTACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTg            <  1:2405899/100‑1 (MQ=255)

                                                                                      gTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTg            <  2:3267692/100‑1 (MQ=255)

                                                                                       tAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGa           <  2:571798/100‑1 (MQ=255)

                                                                                       tAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGa           >  2:1985777/1‑100 (MQ=255)

                                                                                         aCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCGGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATg         >  2:2417036/1‑100 (MQ=255)

                                                                                          cccGTCCTGCCGGACACGACAGCGTCGAATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGa           <  2:2851297/97‑1 (MQ=255)

                                                                                          cccGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGc        >  2:785807/1‑100 (MQ=255)

                                                                                             gCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAg     <  2:3189791/100‑1 (MQ=255)

                                                                                              cccTGCCGGACACGACAGCATCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGa    >  1:1526861/1‑100 (MQ=255)

                                                                                               ccTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGaa   >  1:1467429/1‑100 (MQ=255)

                                                                                                cTGCCGGACACGACAGCGTCGCATCCGGCagggcgggttacgcaattcatgatggcgggaataactcaatggcaaaaaacacatcttgcggtgtccaact   <  2:3205163‑M2/100‑72 (MQ=255)

                                                                                                cTGCCGGACACGACAGCGTCGCATCCGGCagggcgggttacgcaattcatgatggcgggaataactcaatggcaaaaaacacatcttgcggtgtccaact   <  1:290039‑M2/100‑72 (MQ=255)

                                                                                                cTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAAc  <  1:1680329/100‑1 (MQ=255)

                                                                                                cTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAAc  <  1:3208014/100‑1 (MQ=255)

ACGCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATA‑CCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAAC  >  NC_000913/2837367‑2837562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.