| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,705,971 | C→A | 23.1% | intergenic (‑181/+127) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,705,971 | 0 | C | A | 23.1% | 401.7 / 106.1 | 157 | intergenic (‑181/+127) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base C (57/63); new base A (30/6); total (87/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.17e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.49e-01 | |||||||||||
Only 100 of 170 total aligned reads displayed.
GGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCT > NC_000913/3705873‑3706070 | gggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcg > 2:2129017/1‑100 (MQ=255)gggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcg > 1:2871723/1‑100 (MQ=255) gAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcggc < 1:756992/100‑1 (MQ=255) gAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGAACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcggc < 1:1226476/100‑1 (MQ=255) aaTGAAGTATTGCTGCCGGATGTCGCTGCACGCAGAGGCACAGCGCCCCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgccgcg > 1:2057767/1‑100 (MQ=255) aaTGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcggcg < 2:1710239/100‑1 (MQ=255) aaTGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcggcg < 2:1545933/100‑1 (MQ=255) aTGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGt < 2:964478/100‑1 (MQ=255) ctATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACg < 1:536707/99‑1 (MQ=255) aTTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCTACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGcc < 1:2643111/100‑1 (MQ=255) tgctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCtt > 2:727229/1‑100 (MQ=255) tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGccagatc > 2:571589/1‑95 (MQ=255) gcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATcc > 2:1736738/1‑100 (MQ=255) gcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATcc < 1:2782064/100‑1 (MQ=255) cGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCgg < 1:984871/100‑1 (MQ=255) cGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCgg < 2:382320/100‑1 (MQ=255) ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTATGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGc < 1:1018245/100‑1 (MQ=37) gacggCGCTGCACGCAGCGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTCATGCCGGATGCGGCGTTAACGCCTTATCCGGcc < 1:3324301/97‑1 (MQ=255) aTGGCGCTGCACGCAGAGGCACAGCGGCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCt < 2:612960/100‑1 (MQ=255) aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGcat < 2:602555/100‑3 (MQ=37) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑a < 2:2890647/100‑1 (MQ=255) gcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑aaa > 2:1212625/1‑100 (MQ=255) cTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑aaaa > 2:2763076/1‑100 (MQ=255) gCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATc > 1:3248448/1‑100 (MQ=255) gCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATc > 1:3209056/1‑100 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCg > 2:1939794/1‑100 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCg < 1:67872/100‑1 (MQ=255) cGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTg < 2:3148290/100‑1 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc < 1:2910478/100‑1 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc < 1:2990643/100‑1 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc > 1:3065622/1‑100 (MQ=255) cAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCa > 2:3006712/1‑100 (MQ=255) agagGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCaa < 2:2808960/100‑1 (MQ=255) gagGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCaa < 2:2148281/99‑1 (MQ=255) gagGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCAGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCaaa > 2:512624/1‑100 (MQ=255) ggCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAAtt < 2:2183261/100‑1 (MQ=255) gCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTc > 2:3310428/1‑100 (MQ=255) gCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTc < 1:2417294/100‑1 (MQ=255) gCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTc < 2:148912/100‑1 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTc > 2:1081574/1‑99 (MQ=255) caGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAAt < 1:1981949/100‑1 (MQ=255) gcgcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATAc < 1:406756/100‑1 (MQ=255) gcgcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATAc < 1:3554152/100‑1 (MQ=255) cACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTg > 2:2532193/1‑100 (MQ=255) cACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTg > 2:44263/1‑100 (MQ=255) tataCAGATTTTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACAtt < 1:512622/92‑1 (MQ=255) tataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑At‑t > 1:1918168/1‑100 (MQ=255) tataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑At‑t > 2:2711680/1‑100 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑g > 2:2307703/1‑100 (MQ=255) gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTa > 1:2973093/1‑100 (MQ=255) ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAgg > 1:494795/1‑100 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGcc > 2:1767517/1‑100 (MQ=255) ttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCt < 1:2013829/100‑1 (MQ=255) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGa > 1:3534522/1‑100 (MQ=255) aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGAt > 2:1639038/1‑100 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCTTTCTCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATa < 1:2492857/100‑1 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATa < 2:2271243/100‑1 (MQ=255) aGTGCGCTTTGGTTATGCCGTATGCGGCGTTAACGCCTTAACCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAg < 1:2134437/99‑1 (MQ=255) gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCg > 2:3193447/1‑100 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCgg < 2:2713378/100‑1 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAg < 2:1789689/100‑1 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAg > 1:599879/1‑100 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAgc < 1:2422677/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAAAACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAgc > 2:2501397/1‑100 (MQ=255) tgatttgtaggCCGGATAACGCATTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCAGG‑AG‑TTAT‑‑GTAGTCCTGATAAGCGTAgcgc > 1:1612746/11‑100 (MQ=18) ttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCATAC‑AAAAACATGCAAATTCAATAGATTGCAGAGAT‑TAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATc > 2:3109539/7‑100 (MQ=17) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATc < 1:281037/100‑1 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCa < 2:3458914/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg < 2:2811572/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg < 1:1949751/100‑1 (MQ=255) taggCCGGATAAGGCGTTTACGTCGCATCCGGCCTAC‑AAAAGAGTGCAAATTCAATACATTGCATG‑GG‑CCAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 1:1260320/4‑100 (MQ=17) taggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAACATATTGC‑‑A‑AT‑TCTCTTGTAGGCCTGATAAGCGTAGCGCATCAgg > 2:2022583/4‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCAGG‑AC‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:665379/4‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCATGAAAATTCAATACATTGCAAG‑AT‑TTTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 1:3007797/4‑100 (MQ=17) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAgg < 1:788065/100‑1 (MQ=255) aggCCGGATAAGGCGTTTACGCCGCATCTGGCCTAC‑AAATTCTTCCAAATTCAATATATTGCAGA‑AA‑TCAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:2744517/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCACC‑AT‑CCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:943090/3‑100 (MQ=21) aggCCGGATAAGGCGTTCACGCCGCATCCGGCATAC‑AAAATTGTGTAAATTCAATAAATTGATCG‑AT‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:1950722/3‑100 (MQ=21) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGc < 1:2766662/100‑1 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa > 2:866177/1‑100 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa > 1:3083606/1‑100 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATCCAATACATCGCAGA‑AT‑TTTC‑‑GTAGGCCTGACAAGCGGAGCGCATCAGGCa > 1:694511/1‑100 (MQ=255) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCACC‑AT‑CCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:3343404/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCAGG‑AG‑CTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2520086/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑A‑AT‑CTCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1269527/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑A‑AT‑CTCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2990578/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCAGG‑AG‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2343883/2‑99 (MQ=21) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:781198/1‑100 (MQ=255) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:1659209/1‑100 (MQ=255) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:1510454/1‑100 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑GA‑ATCCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 2:2264169/1‑100 (MQ=18) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑GA‑ATCCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 1:1808540/1‑100 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCAGG‑AG‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 2:1424177/1‑100 (MQ=21) ccGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCAGA‑AA‑CCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 2:3378991/1‑98 (MQ=17) ggATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtttt > 2:1332835/1‑100 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATTCATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:1380178/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:1101177/100‑1 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct < 2:2557941/100‑1 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct > 2:1382781/1‑100 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct < 1:1201001/100‑1 (MQ=255) | GGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCT > NC_000913/3705873‑3706070 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |