| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,073,307 | Δ1 bp | 100% | coding (705/1149 nt) | rutA ← | pyrimidine oxygenase, FMN‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,073,305 | 0 | A | . | 96.2% | 449.9 / 8.0 | 104 | coding (707/1149 nt) | rutA | pyrimidine oxygenase, FMN‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base . (49/51); total (52/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.92e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
GTCGGTTTCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGAAAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAG > NC_000913/1073208‑1073400 | gtcgGTTTCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGaag > 2:1053169/1‑99 (MQ=255) tcgGTTTCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGaagc < 1:2875578/100‑3 (MQ=255) tcgGTTTCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGaagc < 1:208115/100‑3 (MQ=255) tcgGTTTCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGGTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGaagc < 1:752742/100‑3 (MQ=255) gTTTCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGt > 1:2794965/1‑100 (MQ=255) gTTTCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGt > 1:3048679/1‑100 (MQ=255) gTTTCATCGGCAATCACCATAAACAACACACAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGt < 1:81628/100‑1 (MQ=255) tttCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTg < 2:125401/100‑1 (MQ=255) tCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTggg < 1:2990146/100‑1 (MQ=255) tCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTggg < 1:1579829/100‑1 (MQ=255) cATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGgt < 2:2162450/100‑1 (MQ=255) cATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGgt < 2:122860/100‑1 (MQ=255) aTCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGgtg > 1:2166040/1‑100 (MQ=255) aTCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGgtg > 1:1972991/1‑100 (MQ=255) aTCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGgtg > 2:1504509/1‑100 (MQ=255) aTCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCGGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGgtg < 1:2486417/100‑1 (MQ=255) tCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGgtgt > 2:2264080/1‑100 (MQ=255) cGGCAATCACCATATACAACACATAAGATCCATCGTCGCGTCCGGTTTGCGCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGgtgtn < 1:2407735/100‑2 (MQ=255) cGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGgtgt < 2:1330394/99‑1 (MQ=255) cGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTa < 2:2813540/100‑1 (MQ=255) ggCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTAt > 2:2622165/1‑100 (MQ=255) gCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTAtt > 2:2963413/1‑100 (MQ=255) gCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTAtt < 1:259001/100‑1 (MQ=255) cAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTAttt < 1:1745850/100‑1 (MQ=255) cAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTAttt > 1:1158441/1‑100 (MQ=255) aaTCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTa < 2:625814/100‑1 (MQ=255) tCACCATAAACAACACATATGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACg < 1:2406795/100‑1 (MQ=255) tCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACg > 2:2085285/1‑100 (MQ=255) cACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGc < 2:675867/100‑1 (MQ=255) actttAAACAACACATAAGATCCAACGTCGCTTCCGGTTTGCTCTGTTGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGcc < 1:119929/96‑1 (MQ=255) aCCATAAACAACACATAAGTTCCAACGTCGCGTTCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGcc < 1:585288/100‑1 (MQ=255) aCCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGcc > 2:2280675/1‑100 (MQ=255) aCCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGcc > 1:1864267/1‑100 (MQ=255) cATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCtt > 2:2295571/1‑100 (MQ=255) cATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCtt > 1:2824257/1‑100 (MQ=255) cATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCtt > 2:287249/1‑100 (MQ=255) cATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCtt > 1:367759/1‑100 (MQ=255) tAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGAAAGCCGTGGGTGTATTTACGCCttt > 1:2227322/1‑100 (MQ=255) aacaacACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGcc < 2:2940988/100‑1 (MQ=255) acaacaCATAAGAGTTAACGTCGCGTTCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCCGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCg > 2:2628274/1‑100 (MQ=255) acaacaCATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCg > 1:3018626/1‑100 (MQ=255) aacaCATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGaa < 1:1923032/100‑1 (MQ=255) acacATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGaaa > 1:2591769/1‑100 (MQ=255) cacaTAAGTGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAAc < 1:1774695/100‑1 (MQ=255) cacaTAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAAc < 2:1742729/100‑1 (MQ=255) caTAAGAGCCAACGAAGCGACCGGAATGCTAAGCAGCCTGTTTCATACGCGCAGCGGTCGGGGC‑CAAGACGTGGGCGTATTTACGCCTTTGCCGAAACAg > 2:286067/1‑100 (MQ=255) aTAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGa > 1:1551703/1‑100 (MQ=255) tAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGaaa > 2:2082441/1‑95 (MQ=255) tAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGaa < 1:576359/100‑1 (MQ=255) aaGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAg < 1:2499030/100‑1 (MQ=255) gagCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGtt < 1:1292015/100‑1 (MQ=255) agCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTg > 2:1412443/1‑100 (MQ=255) agCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTg < 1:1354770/100‑1 (MQ=255) ccAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGaa > 1:2808577/1‑100 (MQ=255) aaCGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAAt > 1:313906/1‑100 (MQ=255) aaCGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAAt > 1:318068/1‑100 (MQ=255) gTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCgg < 2:2972039/100‑1 (MQ=255) gTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCgg < 2:2825532/100‑1 (MQ=255) gTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCgg < 1:1412457/100‑1 (MQ=255) cgcgTCCGGTTTGCTCTGCGGCCTGTTTCATCCGTGCAGCGGTCGGGGCGAAAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGc < 1:1629753/100‑1 (MQ=255) cgcgTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCa < 2:2875141/100‑1 (MQ=255) gcgTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTAGTTACGCCTTTGCCGAAACAGAAGTTGAAATCCGCAt > 2:2580578/1‑100 (MQ=255) cgTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATa > 2:325506/1‑100 (MQ=255) cgTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCATTTGCCGAAACAGAAGTTGAAATCGGCATa > 1:2458254/1‑100 (MQ=255) cgTCCGGTTTGCTCTGCGGCCTGTTCCATCCTCGCAGCGTTCGGGACG‑AAGCCGTGGGTGTCTTTACGCCTTTGCCTAAACAGAAGTTGAAATCGGc < 2:1321953/97‑1 (MQ=255) gTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATAc < 1:287252/100‑1 (MQ=255) ccGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCg > 1:838056/1‑100 (MQ=255) cGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCgg > 2:695484/1‑100 (MQ=255) gTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGc > 1:811677/1‑100 (MQ=255) ttGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCgg < 2:579152/100‑1 (MQ=255) ttGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCgg < 1:2684324/100‑1 (MQ=255) tGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGAAAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCgg > 2:1336259/1‑100 (MQ=255) tGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGga > 2:2412141/1‑100 (MQ=255) gCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGgag > 2:2517975/1‑100 (MQ=255) ctctGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGgaga > 1:1519626/1‑100 (MQ=255) tctGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGaa > 1:2471370/1‑100 (MQ=255) ctGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGAGGAGAAc < 1:1589988/100‑1 (MQ=255) ccTGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATg < 1:695488/100‑1 (MQ=255) tGTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGcc < 1:2306319/100‑1 (MQ=255) gTTTCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGcc > 1:506485/1‑99 (MQ=255) tCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCg < 1:1328525/100‑1 (MQ=255) tCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCg < 1:466959/100‑1 (MQ=255) tCATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCg < 2:2794933/100‑1 (MQ=255) cATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGt > 2:2262275/1‑100 (MQ=255) cATCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGt > 2:1187763/1‑100 (MQ=255) aTCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTc > 2:1319749/1‑100 (MQ=255) aTCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTc < 1:2264105/100‑1 (MQ=255) aTCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGACATACCGGGCGGAGAACGCCATGCCAGCGTc > 1:1289052/1‑100 (MQ=255) tCCGCGCAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCg < 2:782314/100‑1 (MQ=255) gcAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTg < 1:2232184/100‑1 (MQ=255) cAGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGc < 2:2157272/100‑1 (MQ=255) aGCGGTCGGGGCG‑CAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGcc > 2:3018044/1‑100 (MQ=255) aGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCTATGCCAGCGTCGCTTTGcg < 2:1341845/100‑2 (MQ=255) aGCGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCAGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGcc > 1:2701939/1‑100 (MQ=255) cGGTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCg < 2:1474067/100‑1 (MQ=255) gTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCgg < 2:2591737/99‑1 (MQ=255) gTCGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACACCATGCCAGCGTCGCTTTGCCCGgc > 2:509793/1‑100 (MQ=255) cGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGgcgc > 1:654699/1‑100 (MQ=255) cGGGGCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGgcgc < 2:2399055/100‑1 (MQ=255) gggCG‑AAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAg > 1:2417131/1‑100 (MQ=255) | GTCGGTTTCATCGGCAATCACCATAAACAACACATAAGAGCCAACGTCGCGTCCGGTTTGCTCTGCGGCCTGTTTCATCCGCGCAGCGGTCGGGGCGAAAGCCGTGGGTGTATTTACGCCTTTGCCGAAACAGAAGTTGAAATCGGCATACCGGGCGGAGAACGCCATGCCAGCGTCGCTTTGCCCGGCGCAG > NC_000913/1073208‑1073400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |