| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,170,338 | (A)6→5 | 100% | coding (37/963 nt) | ldtC ← | L,D‑transpeptidase linking Lpp to murein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,170,333 | 0 | A | . | 95.7% | 490.7 / 11.1 | 115 | coding (42/963 nt) | ldtC | L,D‑transpeptidase linking Lpp to murein |
| Reads supporting (aligned to +/- strand): ref base A (1/3); new base . (47/63); total (49/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.79e-01 | |||||||||||
Only 100 of 127 total aligned reads displayed.
ATGAAATTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAATTA > NC_000913/1170234‑1170428 | aTGAAATTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTa < 1:1744890/100‑1 (MQ=255)aTGAAATTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTa > 2:604023/1‑100 (MQ=255) aaaTTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCTAGCGCCACGGCAGCGGCGAACGTaaaa < 2:2277941/100‑1 (MQ=255) aaaTTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaaa > 2:2144043/1‑100 (MQ=255) aaTTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaaaa > 1:1726622/1‑100 (MQ=255) tttGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaaaacg < 1:1710106/100‑3 (MQ=255) tGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaaaacgtt < 1:91790/100‑5 (MQ=255) tGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaaaacgtt < 2:1467312/100‑5 (MQ=255) gTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTa < 2:376375/100‑1 (MQ=255) ttttCGCCAACCAGACGACTTCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAg < 1:714407/100‑1 (MQ=255) ttttCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAg < 2:2108879/100‑1 (MQ=255) ttttCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAg > 2:2832248/1‑100 (MQ=255) ttCTCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAg < 2:193524/98‑1 (MQ=255) ttCGCCACCGCGACGACTGCCCGCTGGAGGCAGAGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGc < 2:1764834/99‑1 (MQ=255) ttCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGcc > 1:1447755/1‑100 (MQ=255) tCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCa > 1:2377899/1‑100 (MQ=255) tCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGACAAGGCAGCGGCGAACGT‑AAAAACGTTAGcag > 1:1764854/1‑98 (MQ=255) cGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGCTAGCCAg < 1:1585426/100‑1 (MQ=255) gCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACAT‑AAAAACGTTAGCCAGc < 1:2617559/100‑1 (MQ=255) ccAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCg < 2:3004169/100‑1 (MQ=255) aCCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCgag < 1:1971161/100‑1 (MQ=255) aCCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCgaga < 1:2870550/100‑1 (MQ=255) ccAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGaa < 1:2976202/100‑1 (MQ=255) cAGACGACTGCCCGCTAACACCAACGGCCAGATGATGTCTCTTGCCGGTACCCCCACAGCCACGACCGCCGCGAACGT‑AAACACCTTAACCACCGAGaa > 2:823841/1‑99 (MQ=255) aGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCAAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAACGAGaaaa > 1:2542719/1‑100 (MQ=255) aGACGACTGCCCGCTCGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACG‑GAAAAACGTTAGCCAGCGAGgaaa > 2:556236/1‑100 (MQ=255) cgacTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcg < 1:604027/100‑1 (MQ=255) acctggccGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcgc > 1:856668/7‑100 (MQ=37) ccTGGCCGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCTGTAGCGCCAGCGCCACGTCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcg > 1:562805/2‑98 (MQ=37) ccTGGCCGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcgcg > 2:2241222/2‑100 (MQ=255) ccTGGCCGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcgcg > 1:2763132/2‑100 (MQ=255) ccTGGCCGCTGCCGCCAGCGAGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGTACGT‑AAAAACGTTAGCCAGCGAGAAAAAcgcg > 2:2131295/2‑100 (MQ=255) cTGGCCGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGt > 2:2996570/1‑100 (MQ=255) cTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGt < 1:226855/100‑1 (MQ=255) tggccGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGtt > 1:1875293/4‑100 (MQ=255) tggccGCTGCCGCCAGCGGGCAGGTGTTGGCTCTTGCCGGTAGCGCCAGCGCCACCGCAGCGGAGAACGT‑AAAAACATTAGCCAGCGAGAAAAACGCGt > 1:1281554/4‑99 (MQ=255) tGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGtt > 1:1687595/1‑100 (MQ=255) tGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGtt < 1:1192841/100‑1 (MQ=255) gCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGttt > 2:1110977/1‑100 (MQ=255) gCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGttt > 1:1017572/1‑100 (MQ=255) cccGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGtttt > 1:2865599/1‑100 (MQ=255) tggtggCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatca < 1:3036438/100‑1 (MQ=255) gcggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatcatc > 2:1243744/1‑100 (MQ=255) gcggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatcatc < 1:1110987/100‑1 (MQ=255) gcggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatcatc < 1:2096371/100‑1 (MQ=255) cggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGTCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGAtcatca < 1:940715/100‑1 (MQ=255) cggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGAtcatca < 2:27092/100‑1 (MQ=255) cggcAGCGGCAAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatcatc > 2:570158/1‑99 (MQ=255) ggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCTCCACGGCAGCGGCGAACGT‑AAAAACGTTAGGCAGCGAGAAAAACGAGTTTTGATCATCAc > 2:2852240/1‑100 (MQ=255) ggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCAc < 1:1922746/100‑1 (MQ=255) gtaGCGGCCAGGTGTTGGCTTTTGTCTGTAGCGCCAGCGTCACGGCAGCGGTGAACGT‑AAAAATTTTAGCCAGCGAGAAAAACGCGTTTTGAtcatca < 2:1408000/96‑1 (MQ=255) cAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCAcc < 1:2769374/100‑1 (MQ=255) cAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCa > 2:2026637/1‑100 (MQ=255) cAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCa > 2:2605228/1‑100 (MQ=255) cGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCaaaa > 2:2099199/1‑100 (MQ=255) cGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCaaa > 2:2410374/1‑99 (MQ=255) aGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCa < 2:1163388/100‑1 (MQ=255) ggtggtGGCTTTTGCCGGTCGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGTTCATCACCAAAAATcc < 2:2731824/98‑1 (MQ=255) ggTGTTGGCTTTTGCCTGTAGCGCCAGCTCCACGGCAGCGGCGAACGT‑TTTTACGTTATCCAGCGATAAAAACGCGTTTTGATCATCAcc < 2:2865619/90‑1 (MQ=255) ggTGTTGGCTTTTGCCGGTAGCGCCAGCGCCATGGCAGCCGCCAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCat < 2:2132101/100‑1 (MQ=255) ggTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCat < 2:166855/100‑1 (MQ=255) ggTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCat < 2:817167/100‑1 (MQ=255) ggTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCat > 1:415101/1‑100 (MQ=255) ggTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCat < 2:177154/100‑1 (MQ=255) gtTGGCTTTTGCCGGTATCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCataat < 2:2547592/100‑1 (MQ=255) gtTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCataat > 1:2547623/1‑100 (MQ=255) ggCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATaataaa > 2:2280664/1‑100 (MQ=255) gCTTTTGCCGGTAGCGCCAGTGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATaataaat < 1:158883/100‑1 (MQ=255) cTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATaataaat < 1:2927073/100‑1 (MQ=255) ttttGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAatat > 1:2341989/1‑100 (MQ=255) tttGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAAtata < 1:1988790/100‑1 (MQ=255) tGCCGGTAGCGCCAGCGTCACGGCAGCGGCGATCGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAg < 1:2639984/100‑1 (MQ=255) tGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCTAGAAAAACGCGTTTTTATCATCACTAAAAATCCATAATAAATATAAg < 2:519475/100‑1 (MQ=255) ccGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGt < 1:1977721/100‑1 (MQ=255) ggTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTa > 2:1385058/1‑100 (MQ=255) ggTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTa > 1:1854564/1‑100 (MQ=255) gTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTAt > 1:2498165/1‑100 (MQ=255) gTAGCGACAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAATACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAg < 2:1002941/95‑1 (MQ=255) agcgccagcgccACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCTAGAAAAACGCGTTTTTATCATCACCTAAAATCCTTAATAAATATAAGGTTAtt < 2:1238406/99‑1 (MQ=255) agcgccagcgccACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTg < 2:152708/100‑1 (MQ=255) gcgaaagcgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATAACTAAAAATCCATAATAAATATAAGGTTATTg < 2:2005474/94‑1 (MQ=255) cgccagcgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGTGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGta < 1:45582/100‑1 (MQ=255) cgccagcgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGta > 1:2728387/1‑100 (MQ=255) cgccagcgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGAAATGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGta > 1:801667/1‑100 (MQ=255) ccagcgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGtaat < 2:1813709/100‑1 (MQ=255) cgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAAc < 2:1726602/100‑1 (MQ=255) cgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAAc < 2:1673791/100‑1 (MQ=255) gcaaCGGCAGCGGCGAACGT‑AAAAACGTTAGCTAGCGAGAAAAACGCGTTTTGATCATCACAAAAAATCCATAATAAATATAAGGTTATTGTAATAAACa < 2:1246646/97‑1 (MQ=255) caCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGa < 2:2341962/100‑1 (MQ=255) aCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGa < 1:618994/99‑1 (MQ=255) aCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGAt < 1:2423107/100‑1 (MQ=255) cGGCAGCTGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATa < 1:556239/100‑1 (MQ=255) gCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACaagatcg > 1:2145075/1‑94 (MQ=255) cggcgAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGAACATAACCAAAAATCCATAATAAATATAAGGTTATTGGAATAAACAGATAAGCCTg > 2:2462560/1‑100 (MQ=255) ggcgAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTg > 1:2183922/1‑100 (MQ=255) ggcgAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGa < 2:423881/100‑1 (MQ=255) cgAACGT‑AAAAACGTTAGCAAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAAt < 2:736496/100‑1 (MQ=255) gAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAAtt < 2:1687575/100‑1 (MQ=255) gAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAAtt > 1:1568346/1‑100 (MQ=255) aaCGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAATGTTATTGTAATAAACAGATAAGCCTGAATTa < 2:2324134/100‑1 (MQ=255) | ATGAAATTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAATTA > NC_000913/1170234‑1170428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |