| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,563,518:1 | (A)5→6 | 100% | intergenic (+401/‑74) | yffP → / → yffQ | CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,563,513 | 1 | . | A | 92.8% | 304.1 / 16.7 | 97 | intergenic (+396/‑79) | yffP/yffQ | CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base . (4/3); new base A (41/49); total (45/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 110 total aligned reads displayed.
GGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑A‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAATCG > NC_000913/2563415‑2563607 | ggTGAATTTTGTGATGCAGATCGCTTTTTTTTTTTATTTATTTTTGTTTAATTCAATCAACAAAAGACAGTTCCCAACAACAATATAAAGATGGGA‑GG‑T‑a > 2:1489855/1‑100 (MQ=255)ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑a > 2:970812/1‑100 (MQ=255) tGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTAAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑a‑aa > 1:34241/1‑100 (MQ=255) aaTTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑a‑aaca < 1:2044657/100‑3 (MQ=255) aaTTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑a‑aaaa < 1:1037956/100‑1 (MQ=255) aTTTTGTGATGCAGATCGCTTTTTCTCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑a‑aaaaa > 2:1141620/1‑99 (MQ=255) aTTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑a‑aaaaa > 1:2173839/1‑99 (MQ=255) aTTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑a‑aaaaa > 1:553222/1‑99 (MQ=255) aTTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑a‑aaaaa > 2:2496169/1‑99 (MQ=255) ttttGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑a‑aaaaat > 1:1449456/1‑98 (MQ=255) tttGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑a‑aaaaatg < 1:1118219/100‑4 (MQ=255) tttGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTAAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑a‑aaaaatg < 2:1706177/100‑4 (MQ=255) gtgATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAAGCAATTCCCAAAAAAAAAATAAAGATGGGA‑GA‑A‑A‑AAAATGAAAc > 1:504201/1‑100 (MQ=255) tgATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAAc > 2:387224/1‑100 (MQ=255) tgATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGAAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAAc < 2:159521/100‑1 (MQ=255) tgATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAAGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAAc > 1:2610152/1‑100 (MQ=255) gATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCATTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGaaa > 1:1221504/1‑98 (MQ=255) gATGCAGATCGCTTTTTCCCTACAGGCATATATGTTTAATTAAATAAATGAAAGGCAATTCCAAACAACAAAAAAAAGATAGCA‑CT‑T‑a‑aaaaaacaaac > 2:2553974/1‑92 (MQ=255) tGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGt > 2:1983142/1‑100 (MQ=255) tGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGt > 2:1926580/1‑100 (MQ=255) tGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGt > 1:2265099/1‑100 (MQ=255) tGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑A‑AAAATGAAACGGTg < 2:2963023/100‑1 (MQ=255) gCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTg < 2:553219/100‑1 (MQ=255) cAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTgg < 2:1431258/100‑1 (MQ=255) cAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTgg < 1:2600214/100‑1 (MQ=255) cAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTgg > 2:2431511/1‑100 (MQ=255) gATCGCTTTTTTCCTTCAAGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAATGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGa < 2:1893417/100‑1 (MQ=255) gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTTAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGa < 1:1047861/100‑1 (MQ=255) gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGa < 2:2353315/100‑1 (MQ=255) gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGa < 1:1868404/100‑1 (MQ=255) gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTACCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGa > 1:111893/1‑100 (MQ=255) gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAATTCACAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACAGTAGGa > 2:4566/1‑100 (MQ=255) tCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAg < 2:1178777/100‑1 (MQ=255) cGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGt > 1:966275/1‑100 (MQ=255) gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTg < 1:2567518/100‑1 (MQ=255) ttttCCCTTCAGGCATTTTTGTTTAATACAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCt > 2:17655/1‑100 (MQ=255) cccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTAc < 1:2619252/100‑1 (MQ=255) cTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTg < 1:2027104/100‑1 (MQ=255) tCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTgg > 1:1185512/1‑99 (MQ=255) tCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGt < 2:1884366/100‑1 (MQ=255) aGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGa < 1:871618/100‑1 (MQ=255) ggCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGG‑A‑A‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGa > 2:1710247/1‑99 (MQ=255) gCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATg < 1:1555488/100‑1 (MQ=255) cATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATgg < 2:2947507/100‑1 (MQ=255) aTTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAATAAAATAAAGGTGGGAGGG‑T‑A‑AAAATGAAACGGTTTGAAGTGTCTTTACTGGTGATGGt > 1:1313883/1‑100 (MQ=255) ttttttttTAATTCAATCAACGAAAGGCAGTTCACAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATgg < 2:1834792/98‑1 (MQ=255) ttttGTTTAATTCAATCAACGAAAGGTAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTaa < 1:71800/100‑1 (MQ=255) tttGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAAt < 2:166057/100‑1 (MQ=255) gTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGtt > 2:545557/1‑100 (MQ=255) gTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGtt > 1:2260791/1‑100 (MQ=255) ttAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTgg < 2:930324/100‑1 (MQ=255) ttAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTgg < 1:2841673/100‑1 (MQ=255) tAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGAGGGAAGTGACTTTACTGGAGATGGTAATGTTGGt > 1:517920/1‑100 (MQ=255) aaTTCAATCAATGAAAGGTAGTTTCCAACTAGATTATAAAGGTGGGT‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGGGATGGTAATGTTGGtt < 1:381845/100‑1 (MQ=255) tcaatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGc < 2:1812017/100‑1 (MQ=255) caatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCt > 1:1565053/1‑100 (MQ=255) caatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCt > 1:2513209/1‑100 (MQ=255) aatcaaCGAAAGGCAGTTCCCAACAACAAAATAAATATTGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGCTGATGGTAATGTTGGTTTGCTg < 2:559144/100‑1 (MQ=255) aatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg < 1:368785/100‑1 (MQ=255) atcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg > 2:1254446/1‑99 (MQ=255) atcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGt > 1:1200427/1‑100 (MQ=255) tcaaCGAAAGGCAGTTCCTAATAACAAAATAAAGATGGGA‑TG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGcg < 1:1803226/97‑2 (MQ=255) aaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt > 2:1050119/1‑100 (MQ=255) aCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTg < 1:72562/100‑1 (MQ=255) aCGAAAGGCAGTGCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTg > 1:2001360/1‑100 (MQ=255) cGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGa > 1:2322897/1‑100 (MQ=255) aaGGCAGTTCCCAACAACAAAATAAAGATGTGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACt < 2:505342/100‑1 (MQ=255) aaGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACt > 1:1737075/1‑100 (MQ=255) ccgatcttCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACtg < 1:1633981/94‑1 (MQ=255) ggCAGTTCCCAACAACAAAATAAAGATGGGA‑GGAA‑A‑AAAATGAAACGGTGGGAAGTGGCATTACTGGTGATAGTAATGTTGGTTTGCTGTATTGAACtgt > 2:1491997/1‑100 (MQ=255) gCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTTATGGTAATGTTGGTTTGCTGTATTGAACtgtg < 2:229892/100‑1 (MQ=255) gCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTAGCTTTACTGGTGATGATAATGTTGGTGTGCTGTATTGAACtgtg > 2:379279/1‑100 (MQ=255) cAGTTCCCAACAACAAAATAAAGATAAAA‑AA‑AAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACtgtg < 2:2660994/99‑1 (MQ=255) gTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑A‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAagg < 1:1164955/100‑1 (MQ=255) tCCCAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACtgagatcgg > 2:1633962/1‑93 (MQ=255) cccAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggag > 2:1540849/1‑100 (MQ=255) ccAACAACAAAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggagg > 2:629246/1‑100 (MQ=255) aacaacaaAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGAc < 1:2974659/100‑1 (MQ=255) caacaaAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGc > 1:763061/1‑100 (MQ=255) caacaaAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGc > 1:2667757/1‑100 (MQ=255) aacaaAATAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGcc < 1:2761022/100‑1 (MQ=255) acaaAATAAAGATGGGA‑GG‑TAA‑AAAATTAAACGGTGGTAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCa < 1:1632254/100‑1 (MQ=255) aaaTAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGa < 2:746280/100‑1 (MQ=255) aaTAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGaa > 1:1032789/1‑100 (MQ=255) aaTAAAGATAGGA‑GG‑T‑AGAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGAGGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGaa < 2:2827817/100‑1 (MQ=255) aTAAAGATAGGA‑TG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGTTTTGCTGTATTGCACTGTGAAGGAGGACGCTATGaa < 2:2831970/99‑1 (MQ=255) tAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAAc > 1:46345/1‑100 (MQ=255) tAAAGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAAAGTTGGTTTGCTGTATTGAAATGTGAAGGAGGACGCCATGAAAc > 1:1980825/1‑100 (MQ=255) aaaGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACt < 2:929349/100‑1 (MQ=255) aaaGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACt > 1:1737593/1‑100 (MQ=255) aaGATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACtt < 2:1830965/100‑1 (MQ=255) aGATGTGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATTGTAATGTTTGTTTGCTTTATTGAACTGTGAAGGAGTACGCCATGAAACttt < 2:1439960/100‑1 (MQ=255) aGATGGGA‑GG‑TAA‑AAAATGAAACGGTGTGAAGTTGCTTTACTTGTTATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACttt < 1:386435/100‑1 (MQ=255) gATGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACtttt > 1:2915040/1‑100 (MQ=255) tGGGA‑GT‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTTATGGTAATGTTTTTTTGCTGTATTGTTCTTTGAAGGAGGACGCCATGAAACTTTTaa < 2:3034402/100‑1 (MQ=255) tGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTan < 1:2095519/100‑2 (MQ=255) tGGGA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTaa < 1:1093876/100‑1 (MQ=255) gggA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTACTGTAATGAACTGTGAAGGAGGACGCCATGAAACTTTTAAt > 1:2456921/1‑100 (MQ=255) ggA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAATc > 1:350125/1‑100 (MQ=255) ggA‑GG‑TAA‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTAAACTGTAAAGGAGGACGACATGAAACTTTTAAt > 1:395488/1‑99 (MQ=255) | GGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGA‑GG‑T‑A‑AAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAATCG > NC_000913/2563415‑2563607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |