| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 584,262:1 | (A)7→8 | 100% | coding (582/750 nt) | appY → | global transcriptional activator; DLP12 prophage |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 584,255 | 1 | . | A | 96.1% | 335.5 / 6.8 | 102 | coding (575/750 nt) | appY | global transcriptional activator; DLP12 prophage |
| Reads supporting (aligned to +/- strand): ref base . (0/4); new base A (46/52); total (46/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
CGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATT > NC_000913/584156‑584345 | cGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGc < 1:1775037/100‑1 (MQ=255) ggAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑‑a > 2:271435/1‑100 (MQ=255) gAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑‑aa > 2:1812489/1‑100 (MQ=255) gATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑‑aaaaaa‑a > 1:2786229/1‑100 (MQ=255) tataTGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGGCAGTTACTGAAATATTGAGGGATACTAGGATGGTGTATGa‑‑aaaaaa‑aactc < 2:1490817/100‑5 (MQ=255) tataCGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑‑aaaaaa‑aactc < 1:3041838/100‑5 (MQ=255) tataCGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑‑aaaaaa‑aaact > 2:3025755/1‑96 (MQ=255) tataCGAGTAAAAGTATAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑‑aaaaaa‑aactc < 2:2295796/100‑5 (MQ=255) ataCGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑‑aaaaaa‑aactca < 1:2402717/100‑6 (MQ=255) taCGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTAAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCAt > 1:770420/1‑100 (MQ=255) cGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATaa > 1:2970319/1‑100 (MQ=255) aGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAAA‑A‑CTCATAAc < 1:3025788/100‑1 (MQ=255) aGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACt > 2:1726571/1‑100 (MQ=255) aGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAAGTATGCA‑AAAAAA‑A‑CTCATAAc < 2:389315/99‑1 (MQ=255) tGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTc > 2:3044259/1‑100 (MQ=255) gAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCa > 1:2933567/1‑100 (MQ=255) gAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑ATCATAACTTCa > 2:813064/1‑100 (MQ=255) aaaGTGTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCa < 2:1286744/99‑1 (MQ=255) tgTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAAc < 1:107298/99‑1 (MQ=255) aGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTAAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAAc > 1:833982/1‑100 (MQ=255) gTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCaaa > 2:107297/1‑98 (MQ=255) gTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAAct < 1:401070/100‑1 (MQ=255) taataaAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCtt < 2:1103301/100‑1 (MQ=255) ataaAAAAAAGATTCAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑‑AAAAAATA‑CTCATAACTTCAAACTCTTAt < 2:1808388/100‑1 (MQ=255) ataaAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTAt < 1:2514239/100‑1 (MQ=255) ataaAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTAt > 1:1170809/1‑100 (MQ=255) taaAAAAAAGATTAAGGGATGAAGGAACGTTTTTTATTGAAATATTGAGTGATTCTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTAtt < 1:892130/100‑1 (MQ=255) taaAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTAtt < 1:2432202/100‑1 (MQ=255) aaaaaaaaGATTAATGGATGAATGAACGTCATTTTCTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTc < 1:312022/100‑1 (MQ=255) aaaaaaaaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTc < 1:1726591/100‑1 (MQ=255) aaaaaaaaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTc > 2:2259641/1‑100 (MQ=255) aaaaaaaaGATTAAGGGATAAAGGAACGTCATTTACTGAAATATTGAGAGATATTAGGATGATGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTAtt > 2:1806082/1‑99 (MQ=255) aaaaaaGATTAAGGGATGAAGGCACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCt > 1:2483323/1‑99 (MQ=255) aaaaaaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTAATAACTTCAAACTCTTATTCTa > 1:2090658/1‑100 (MQ=255) aaaaaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGTATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTAt < 1:18437/100‑1 (MQ=255) aaaaaaCTAATGGATTAAGGAACGTCATTTACTGAAATATTGAGTGTTATTATTAAAAAATAAAAA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATc < 2:844962/100‑1 (MQ=255) aaaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCa < 2:1472733/100‑1 (MQ=255) aaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCaa < 2:803819/100‑1 (MQ=255) aaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCaa < 2:803912/100‑1 (MQ=255) aaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCaa < 1:2876934/100‑1 (MQ=255) aGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAAt < 2:2152169/100‑1 (MQ=255) gATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATg > 2:794991/1‑100 (MQ=255) aTTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGt > 2:449921/1‑100 (MQ=255) ttAAGGGATGAATGAACGTTATTTACTGAAATATTGAGAGATAATAGAATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCATACTCTTATTCTATCAATGTc < 2:1495254/100‑1 (MQ=255) aaGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGt > 2:593760/1‑100 (MQ=255) aaGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGt < 2:2480723/100‑1 (MQ=255) aGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGTATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGt < 2:89081/99‑1 (MQ=255) aGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTa < 2:56971/100‑1 (MQ=255) gggATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAg > 2:492488/1‑100 (MQ=255) ggATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGc < 2:2914652/100‑1 (MQ=255) ggATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGc > 2:482668/1‑100 (MQ=255) tGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGt > 2:1333446/1‑94 (MQ=255) ggAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGaaa > 1:2436836/1‑100 (MQ=255) aaCGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAAtg > 2:786199/1‑100 (MQ=255) aCGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAAtg > 1:1983428/1‑99 (MQ=255) cGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAAtgtg < 2:2506363/100‑1 (MQ=255) cGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAAtgtg > 2:1675928/1‑100 (MQ=255) gTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGc < 2:2188867/100‑1 (MQ=255) tCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTgg < 2:2786197/99‑1 (MQ=255) tCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGc < 1:215583/100‑1 (MQ=255) tCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGc < 1:1203642/100‑1 (MQ=255) cATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCt > 2:509434/1‑100 (MQ=255) aTTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCta < 1:2178306/100‑1 (MQ=255) aTTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCta < 1:361600/100‑1 (MQ=255) tttACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCtat < 2:1679526/100‑1 (MQ=255) tttACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCtat < 2:1106858/100‑1 (MQ=255) tACTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATaa < 2:225758/100‑1 (MQ=255) aCTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAAc > 2:1360287/1‑100 (MQ=255) cTGAAATGTTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACa > 1:1587466/1‑100 (MQ=255) cTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACa > 2:2237021/1‑100 (MQ=255) cTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGACTATAACa > 1:3037472/1‑100 (MQ=255) cTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCAAGAAATGTGGCTATAACa > 2:436504/1‑100 (MQ=255) cTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCATAACCAAGAAATTTGACTATAACa > 1:2530922/1‑100 (MQ=255) cTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTAATTCTATCAATGTCGTAGCCCAGAAATATGGCTATaata > 1:1007068/1‑98 (MQ=255) cTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAAATCTTATTATATCAATATCGTAAAACAGAAATGTGGCTATAACa > 1:810919/1‑100 (MQ=255) cTGAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTAATAACTTCAAACTTTTATTCTATCAATGTAGTAGCCAAGAAATGTGGTTATAACa > 2:1408365/1‑100 (MQ=255) gAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCATAAATGAGGCTATAACAGt > 1:1867629/1‑100 (MQ=255) gAAATATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAAAGTCGTAGCCAAGAAATGTGGCTATAACAGt > 2:2592557/1‑100 (MQ=255) aaaTATTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAACCCAGAAATGTGGCTATAACAGTa > 1:1725693/1‑100 (MQ=255) tatTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACtt < 1:2195404/100‑1 (MQ=255) atTGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttc < 2:3015258/100‑1 (MQ=255) tGAGAGATACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcat > 1:2580769/1‑100 (MQ=255) gagagaTACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcata < 2:770416/100‑1 (MQ=255) gagagaTACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcata > 1:2126111/1‑100 (MQ=255) agaTACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatattt < 1:2650447/100‑1 (MQ=255) aTACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatatttca < 1:940243/100‑1 (MQ=255) tACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATATCTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatatttcat < 1:1478900/100‑1 (MQ=255) tACTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatatttcat < 2:1278232/100‑1 (MQ=255) tACTAGGATGAGGTATGC‑‑AAAAAA‑ATCTCATAACTTCAATCTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatatttcat < 1:34632/100‑1 (MQ=255) aCTAGGATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGACTATAACAGTACttcatatttcata > 1:1205669/1‑100 (MQ=255) ggATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATAtgtg > 2:2211921/1‑100 (MQ=255) ggATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATAtgtg > 1:1135159/1‑100 (MQ=255) ggATGAAGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATAtg < 2:1867607/98‑1 (MQ=255) gATGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGc < 2:1468867/100‑1 (MQ=255) atggagTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCa < 2:2980646/95‑1 (MQ=255) aTGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAATCTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCa < 1:122814/100‑1 (MQ=255) aTGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCa < 2:1711791/100‑1 (MQ=255) aTGAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATATCAAAACCCAAAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCa < 1:2529868/100‑1 (MQ=255) tGAGGTATGC‑‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCAtt < 1:2378731/100‑1 (MQ=255) gAGGTATGCA‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCAtt < 1:3032250/100‑1 (MQ=255) | CGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGC‑‑AAAAAA‑A‑CTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATT > NC_000913/584156‑584345 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |