| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,446,357:1 | +T | 17.3% | intergenic (+151/+21) | ydbL → / ← feaR | DUF1318 family protein/transcriptional activator for tynA and feaB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,446,357 | 1 | . | T | 17.3% | 304.2 / 68.4 | 98 | intergenic (+151/+21) | ydbL/feaR | DUF1318 family protein/transcriptional activator for tynA and feaB |
| Reads supporting (aligned to +/- strand): ref base . (39/42); new base T (12/5); total (51/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.39e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
TTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTC > NC_000913/1446259‑1446455 | tttCTTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑g < 1:2902380/100‑1 (MQ=255)tttCCTGAAACAAGGTGAATATGCAAAAACTCCTGTCAAATTGCCTTGTGCCCTGGAAAATGCATAGTCAATTATCTGTTTTAACTAATTGGCGTTGCA‑g < 2:1068199/100‑1 (MQ=255) tCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGTCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTa < 2:1915523/100‑1 (MQ=255) ccgatctaCAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTa < 1:1105848/93‑1 (MQ=255) ccTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTAc > 2:127935/1‑100 (MQ=255) ccTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTAc < 2:506456/100‑1 (MQ=255) cTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACa > 2:2274850/1‑100 (MQ=255) cTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACa > 2:2657986/1‑100 (MQ=255) gAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCatgtactg < 2:1434653/100‑8 (MQ=255) gAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATg < 1:2366278/100‑1 (MQ=255) aaaCAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCTCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGc < 1:195224/100‑1 (MQ=255) aCAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTaagatcgg > 2:1105839/1‑93 (MQ=255) aGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGTAC‑TGCAACGc < 1:370003/100‑1 (MQ=38) ggTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGTAC‑TGCAACGcc < 1:2870668/100‑1 (MQ=38) ggTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGcc > 1:986798/1‑100 (MQ=255) ggTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGcc > 2:2533520/1‑100 (MQ=255) ggTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGAGTTGCA‑GTACATGCAACGc > 1:508835/1‑99 (MQ=255) tGAATATTCAAAAACTCCTGTCAAATTGCCTTTTTCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGcc < 1:2971739/98‑1 (MQ=255) tGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCaa < 2:2771722/100‑1 (MQ=255) gAATATTCAAAAACTCCTGTCAAATTGCCTTTTGTGCTGAAAAATGCATAGTCAAATATCGGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAAt < 1:1019089/100‑1 (MQ=255) aaaatacAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGTAC‑TGCAACGCCaa < 2:1616566/92‑1 (MQ=37) aaTATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAAtt < 1:91037/100‑1 (MQ=255) tatTCAAAATCTCCTGTCAAATTGTCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAAt < 1:2551335/97‑1 (MQ=255) tatTCAAAAACTCCTGTCAAATTACATAAAAAAAAAAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAAttag < 2:1028722/100‑1 (MQ=25) aaaaaCTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGc > 2:225339/1‑100 (MQ=255) aaaaaCTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGc > 1:1525350/1‑100 (MQ=255) aaaaCTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCg < 2:3039404/100‑1 (MQ=255) cTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAAt < 1:1382777/100‑1 (MQ=255) cTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAAt < 1:1762711/100‑1 (MQ=255) ccTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAAttt < 2:2275565/100‑1 (MQ=255) tGTCAGATTTCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCTACGCTAATTAGTTAGCGGAATTTa < 2:2018027/99‑1 (MQ=255) gTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACg > 1:1060354/1‑100 (MQ=255) gTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACg > 2:678298/1‑100 (MQ=255) tCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGt < 2:1339658/100‑1 (MQ=255) aaaTTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCg > 2:960147/1‑100 (MQ=255) ttGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATa > 1:2403014/1‑100 (MQ=255) ttGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATa > 1:2403255/1‑100 (MQ=255) tttGCCCTGAAATATGCATAGTCAACTATCTGTTTTAACTAATTGGCCTTGTA‑ATACATGCAACATCAATTAGTTAGCTTAATTTACGTCGATAGTCGcc < 2:174552/100‑1 (MQ=255) tttGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGcc > 1:1448441/1‑100 (MQ=255) gCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAATGCCAATGAGTTAGCGGAATTTACGTCGATACTCGCCTgg > 2:2133905/1‑100 (MQ=255) ctcTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTgg < 1:655075/97‑1 (MQ=255) cccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGc > 1:546199/1‑100 (MQ=255) cccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGc > 1:2804623/1‑100 (MQ=255) ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGc > 2:279596/1‑99 (MQ=255) ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCg > 2:2255290/1‑100 (MQ=255) ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCg < 2:2402986/100‑1 (MQ=255) ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCg < 2:1005663/100‑1 (MQ=255) ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCg < 1:1608710/100‑1 (MQ=255) ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCg < 2:2403227/100‑1 (MQ=255) cTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGt > 1:171294/1‑100 (MQ=255) tGAAAAATGCTTATTCAAATTTTTGTTTTAACTATTTGGCGTTGCA‑GTACATGCAACGCCAATTAGTGAGCGGAATTTACGTCGATACTCGCCTGGCGt < 1:1974280/99‑1 (MQ=38) tGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTc > 2:2008007/1‑100 (MQ=255) tGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTc > 2:1297026/1‑100 (MQ=255) aaaaTGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTATTTAGCGGAAATTACGACGATACACGCCTGGCGTCa > 2:1440512/1‑98 (MQ=39) aaTGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATccc < 1:1549084/100‑1 (MQ=255) aaTGCAGAGTCAGATATCTGTTTTAACTAATTCGCGTTGCA‑GTACAGGCAACTCCAATTAGTTATCGGAATTTACGTCTATTCTCGCCTGGCGtcctcc < 2:2641491/99‑1 (MQ=255) cATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAg > 2:1374596/1‑100 (MQ=255) cATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCAAAATTTACGACAATACTCACCTGGCGTCATCCCAAAg > 1:889475/1‑100 (MQ=38) aTAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGc < 2:1211266/100‑1 (MQ=255) tAGTCAAATATCTGTTTTAACTAATTGACGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGCTACTCGCCTGGCGTCATCCCAAAGCg > 2:659741/1‑100 (MQ=255) aGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGt < 1:795950/100‑1 (MQ=255) gTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGtt > 1:2356389/1‑100 (MQ=255) gTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGAGGAATTTACGTAGAAAATCGCCTGGCGGCATCCAAAAGCGtt > 1:2475091/1‑100 (MQ=38) gTCAAATATCTGTTTGAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGtt < 1:2993774/100‑1 (MQ=255) tCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCg > 2:1937827/1‑97 (MQ=255) cAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGc < 1:788045/100‑1 (MQ=255) cAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGc < 1:127936/100‑1 (MQ=255) aaaTATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCt > 1:780681/1‑100 (MQ=255) aaaTATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCt < 1:2214267/100‑1 (MQ=255) aaaTATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCt < 2:1593730/100‑1 (MQ=255) aaTATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCAAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGc < 1:1138863/98‑1 (MQ=255) atatCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTa < 1:166984/100‑1 (MQ=255) atatCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTa < 1:1118876/100‑1 (MQ=255) gTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATAcc < 1:2188399/100‑1 (MQ=255) tttAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGt < 1:2529077/100‑1 (MQ=255) cgatctttGGCGTTGCATGTAC‑TGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGa < 1:1984547/94‑1 (MQ=37) aCTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGaa > 1:372620/1‑100 (MQ=255) aaTTGGCGTTGCATGTAC‑TGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGaaaaa > 1:1055325/1‑100 (MQ=38) aaTTGGCGTTGCA‑GTACATGCAACGCCAATAAGATAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATAGCGTTGaaaaa > 2:1997907/1‑100 (MQ=255) aTTGGCGTTGCATGTAC‑TGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAAt > 1:541342/1‑100 (MQ=38) aTTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAAt < 1:2617999/100‑1 (MQ=255) ttGGCGTTGCATGTAC‑TGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCCTCCCAAAGCGTTGCTTAAATACCGTTGAAAAATg > 2:2892689/1‑100 (MQ=38) ttGGCGTTGCATGTAC‑TGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGaagatcg > 2:1984524/1‑95 (MQ=37) ttGGCGTTGCATGTAC‑TGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATg > 2:2881036/1‑100 (MQ=38) ctGGCGTTGCATGTAC‑TGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATg < 1:258831/99‑1 (MQ=38) tGGCGTTGCATGTAC‑TGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGa > 2:1684699/1‑100 (MQ=38) ggCGTTGCATGTAC‑TGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGag > 2:258828/1‑99 (MQ=38) ggCGTTGCATGTAC‑TGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGACGTCATCACAAAGAGTTGCTTAAATACCGTTGAAAAATGAc > 1:190397/1‑100 (MQ=37) ggCGTTGCATGTAC‑TGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTAGCCTAGCGTCATCCCAAAAAGTTGCTTAAATACAGTTGAAAAATTAc > 1:659733/1‑100 (MQ=25) ggCGTTGCATGTAC‑TGCAACGCCAATTAGATAGCGGAATTTACGTCAATACTCGCCTGACGTAATACCAAAGCGTTGCTTAAATACCGTTGAAAAATGa > 2:1261770/1‑99 (MQ=25) ggCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAACTCCCGTTGAAAAATGAc > 2:600868/1‑100 (MQ=255) ggCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGAc > 1:2781564/1‑100 (MQ=255) gCGTTGCATGTAC‑TGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGAct > 2:1553514/1‑100 (MQ=38) cGTTGCA‑GTACATGCAACGCAAATTAGTTAGCGGAATTTACGTCGATTCTCGCCTGGCGTCATACCAAAGCGTTGCTTAAATACCGTTGAAAAATGAc > 2:3025855/1‑98 (MQ=255) gTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGActct > 2:1544217/1‑100 (MQ=255) ttGCA‑GTACATGCAACGACAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGActc < 1:2296762/98‑1 (MQ=255) gCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGt < 1:1544235/100‑1 (MQ=255) gCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGt > 1:1499837/1‑100 (MQ=255) gCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGt > 1:877703/1‑100 (MQ=255) cA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTc < 2:2458342/100‑1 (MQ=255) | TTTCCTGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCA‑GTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTC > NC_000913/1446259‑1446455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |