| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,706,028 | T→C | 15.8% | intergenic (‑238/+70) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,028 | 0 | T | C | 15.8% | 345.1 / 46.5 | 155 | intergenic (‑238/+70) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base T (74/51); new base C (21/2); total (102/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.64e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 159 total aligned reads displayed.
TACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGA > NC_000913/3705931‑3706125 | taCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCTGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTTCAAATTCAATACATTGCA‑GAAt‑ttt > 2:117613/1‑100 (MQ=255)taCAGATTGTTGACAAAGTGCGCTTTGTTTATCACGGATGCAGCGTTAACTCCTTATCCGGCCTACAAAATCGTGCAAATTCATTACATTGCA‑GAAt‑ttt < 2:85273/100‑1 (MQ=17)taCAGATTGTTGAAAAAGTGCGCTTTGTTTATGCCGGACGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAt‑ttt > 2:1871446/1‑100 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑g > 1:2857584/1‑100 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑g > 1:1702126/1‑100 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑g < 2:2293156/100‑1 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑Gt > 1:701618/1‑100 (MQ=255) gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTa < 2:371916/100‑1 (MQ=255) ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCTGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAgg < 1:1201207/100‑1 (MQ=255) ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAgg < 2:546365/100‑1 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGTTTTATCCTGTTTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGcc < 1:983872/100‑1 (MQ=18) ttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTATGCCt > 2:1931382/1‑100 (MQ=255) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGa > 2:1712624/1‑100 (MQ=255) aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGAt < 2:2811126/100‑1 (MQ=255) aCAAAGTGCGCTTTGTTTATGCAGGATGCGGCGTTAAAGCCTTATCAGGCATACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGAt > 2:2140109/1‑100 (MQ=18) aaGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAg < 1:2655613/100‑1 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGc > 1:2827266/1‑100 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgc < 2:459978/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAGAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg < 2:1944875/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgc < 1:405163/99‑1 (MQ=255) tttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcgc > 1:746255/1‑100 (MQ=255) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCTTGCAAATTCAATACATTGCA‑GAAA‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATc > 1:1652348/1‑100 (MQ=255) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GGAT‑TTTC‑‑GTAGGCCTGATCAGCGGAGCGCATc < 1:2044564/100‑1 (MQ=255) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATc < 2:2326732/100‑1 (MQ=255) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATc > 1:284379/1‑100 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGAATCa > 1:577411/1‑100 (MQ=255) tgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCA‑TGGG‑CCAT‑‑GTAGGCCTGATAAGCGTAGCGCATCa > 1:1815373/6‑100 (MQ=17) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCA‑GGAG‑CTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:3020255/5‑100 (MQ=18) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACTTTGCAAATTCAATATATTGC‑‑‑AAT‑CTCCGTGTAGGCCTGATAAGCGTAGCGCATCAg < 1:2399970/96‑1 (MQ=18) taggCCGGATAAGGCGTTCACTCCGCATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCA‑GAGA‑TTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:2521256/4‑99 (MQ=14) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAATTGTGTAAATTCAATAAATTGAT‑CGAT‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:3026071/4‑100 (MQ=21) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATCCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATAAgg > 2:1289242/1‑100 (MQ=255) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCA‑TGGG‑CCAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:412280/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAATCATGAAAATTCAATACATTGCA‑AGAT‑TTTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:396157/3‑100 (MQ=17) ggccagataaggcgTTCACGCCGCATCCGGCCTACAAAACTTTGCAAATTCAATATATTGC‑‑‑AAT‑CTCCGTGTAGGCCTGACAAGCGTAGCGCATCAGGCa > 2:2877078/11‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCA‑GAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:85464/2‑100 (MQ=14) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCa > 1:509184/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAATTGTGTAAATTCAATAAATTGAT‑CGAT‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1106044/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCA‑GGAT‑ACGT‑‑ATAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:321438/2‑100 (MQ=17) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:370551/1‑100 (MQ=255) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:1233024/1‑100 (MQ=255) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACTTTGCAAATTCAATATATTGC‑‑‑AAT‑CTCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 1:2262768/1‑99 (MQ=18) ccggataaggcgTTCACGCCGCATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑TGAG‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 1:146806/9‑98 (MQ=17) ccggataaggcgTTCACGCCGCATCCGGCCTACAAAACTTTGCAAATTCAATATATTGC‑‑‑AAT‑CTCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 2:257069/9‑98 (MQ=18) ccGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtt > 1:2028258/1‑100 (MQ=255) ccGGATCCGGCGTTAACGCCTTATCCAGCCTACAAAATTGTGCAAAATCAATTGATTGCA‑CAGC‑TAGC‑‑GTAGGCCTGATGCGCTACGCTCATCAGGc < 2:1483766/97‑1 (MQ=18) cggataaggcgTTCACGCCGCATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCA‑CCAT‑CCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 2:1357700/8‑97 (MQ=18) ggataaggcgTTTACGCCGCATCCGGCCTACAAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttgc > 1:2576818/7‑98 (MQ=18) ggataaggcgTTTACGCCGCATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCA‑GAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:1008095/7‑100 (MQ=17) ggataaggcgTTCACGCCGCGTCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCA‑GGTT‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaatct > 1:2580452/7‑96 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑TGAG‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:131475/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaatct > 2:756655/7‑96 (MQ=25) ggataaggcgTTCACGCCGCATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCA‑GGAG‑CTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgtt > 1:3034549/7‑99 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGAC‑TAT‑‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCagctt > 2:1239319/7‑96 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAATCATGCAAATCCAAAATATTGCA‑GGAG‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttat > 1:1066030/7‑98 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCCACAAAGTCTTGCAAAATCAATAAATTGCAGGAAC‑GAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaacta > 2:2269240/7‑96 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCATAC‑AAATCATGCAAATCCAAAATATTGCA‑GGAG‑ATAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGACAttta > 1:2756742/7‑98 (MQ=18) ggATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtttt < 1:2969638/100‑1 (MQ=255) gataaggcgTTTACGCCGCATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCA‑GAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgtttt > 2:2192871/6‑100 (MQ=17) ataaggcgTTCACGCCGCATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑TGAG‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAGTtttg < 2:146804/96‑1 (MQ=17) aTGGGGCGTTATCGCTTTATAGGGCGAAAAAAATCGTGGAAATTCACTACATTGCA‑GAAT‑TTTC‑‑GGAGGGCTAATAAGTGGAGCGCATCAGGCATTtttg < 2:1974961/100‑1 (MQ=16) gcggcgTTAACGCCTTATCCAGCCTACAAAATAGTACAAAATCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGAGCATCAGGCATTtttgcc > 2:704377/1‑100 (MQ=18) ggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCATGATAAGCGGAGCGCATCAGGCATTtttgcctt > 1:6083/1‑100 (MQ=255) ttAACGCCTTATCCGGCCTACAAAATCGTGTAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 2:2555109/98‑1 (MQ=255) tAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc > 2:1710077/1‑99 (MQ=255) tAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa < 2:1381428/100‑1 (MQ=255) aaCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCAt > 1:2196911/1‑100 (MQ=255) aCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 1:2420009/100‑1 (MQ=255) gCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg < 1:1116001/100‑1 (MQ=255) aTCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg < 1:2760442/100‑1 (MQ=255) ccGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa > 1:1980526/1‑100 (MQ=255) cGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt > 1:464485/1‑100 (MQ=255) gCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑TTAGGCCTGATAAGCGTAGCGCATCATGCATTTTTGCCTTTGCCATCAGTCtt < 2:2656694/94‑1 (MQ=255) ccTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc < 2:1831134/100‑1 (MQ=255) ccTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc < 2:1626755/100‑1 (MQ=255) ccTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc > 2:2691448/1‑100 (MQ=255) tACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt > 2:671196/1‑100 (MQ=255) aaaaTCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa < 2:1227770/100‑1 (MQ=255) aaTCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat < 2:496477/100‑1 (MQ=255) aTCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAatt > 2:919909/1‑100 (MQ=255) tCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAatta < 2:796912/100‑1 (MQ=255) tCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAatta < 2:388500/100‑1 (MQ=255) cGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattat > 1:1187900/1‑100 (MQ=255) gTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattatt > 2:2082608/1‑100 (MQ=255) gTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattatt > 1:1933076/1‑100 (MQ=255) tGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCTCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 1:997315/100‑1 (MQ=255) tGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 1:1549065/100‑1 (MQ=255) gCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg > 2:2394884/1‑100 (MQ=255) aaaTTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTTTCTTTTTCTTCAGTCTTGTATGGCGTTTAATTATTTGAt > 2:2067293/1‑100 (MQ=21) ttCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATaga < 2:1690613/100‑1 (MQ=255) tCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATagag > 1:962990/1‑100 (MQ=255) tCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTATATGGCTTTTAATTATTCGATagag > 1:632627/1‑100 (MQ=255) cAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga < 2:1117033/100‑1 (MQ=255) aTACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACg > 2:1666298/1‑100 (MQ=255) ttGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTATATGGCTTTTAATTATTCGATAGAGACGTTTTc > 1:259594/1‑100 (MQ=255) gCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGa < 1:260192/100‑1 (MQ=255) a‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 2:2391597/100‑1 (MQ=255) gAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt < 2:2233571/100‑1 (MQ=255) gAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt > 1:1545261/1‑100 (MQ=255) aT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGa > 1:2223029/1‑100 (MQ=255) | TACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGA > NC_000913/3705931‑3706125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |