| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,706,048 | G→T | 25.9% | intergenic (‑258/+50) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,048 | 0 | G | T | 25.9% | 325.6 / 100.9 | 158 | intergenic (‑258/+50) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base G (63/50); new base T (35/3); total (103/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.40e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.66e-01 | |||||||||||
Only 100 of 163 total aligned reads displayed.
TGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACC > NC_000913/3705949‑3706146 | gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATCAGCGGa > 2:1217667/1‑100 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAg > 1:587145/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAgcg < 1:3040692/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAgc < 1:405163/99‑1 (MQ=255) tttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAgcgc > 1:746255/1‑100 (MQ=255) tttgtaggCCGGATAAGTCGTTCACTCCGCATCCGGCCTACAAAAGCACGCAAATTCAATATATTACA‑GAGA‑T‑‑TGC‑‑GTAGGCCTGATAAGCGTAg > 2:1462092/8‑95 (MQ=11) tttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCA‑ATTC‑T‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCAt > 1:2836239/8‑100 (MQ=18) ttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACTTTGCAAATTCAATATATTGC‑‑‑AAT‑C‑‑TCCGTGTAGGCCTGATAAGCGTAGCGCATc > 2:2399942/7‑100 (MQ=18) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCTTGCAAATTCAATACATTGCA‑GAAA‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATc > 1:1652348/1‑100 (MQ=255) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GGAT‑T‑‑TTC‑‑GTAGGCCTGATCAGCGGAGCGCATc < 1:2044564/100‑1 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGAATCa > 1:577411/1‑100 (MQ=255) tttATGCCGGATGCGGCGTTAACGACTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑ATC‑‑GTAGGCCTGATAAACGGAGCGCATCa > 2:2268461/1‑100 (MQ=255) tgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCA‑TGGG‑C‑‑CAT‑‑GTAGGCCTGATAAGCGTAGCGCATCa > 1:1815373/6‑100 (MQ=17) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCA‑GGAG‑C‑‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:3020255/5‑100 (MQ=18) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACTTTGCAAATTCAATATATTGC‑‑‑AAT‑C‑‑TCCGTGTAGGCCTGATAAGCGTAGCGCATCAg < 1:2399970/96‑1 (MQ=18) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATCCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATAAgg > 2:1289242/1‑100 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCA‑GAAA‑C‑‑CCT‑‑GTAGGCCGGATAAGCGTAGCGCATCAGGCa > 2:2050239/2‑100 (MQ=17) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCA‑GAGT‑T‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:85464/2‑100 (MQ=14) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCA‑GGGA‑C‑‑TAT‑‑GTAGACCTGATAAGCATAGCGCATCAGGCa > 1:1212855/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCA‑GAGA‑C‑‑TAT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCa > 1:401355/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCA‑GGAT‑A‑‑CGT‑‑ATAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:321438/2‑100 (MQ=17) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:370551/1‑100 (MQ=255) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTACACAAACATGCAAATTCAATAGATTGCA‑GAGA‑T‑‑TAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 1:25540/1‑99 (MQ=17) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCA‑‑ATA‑T‑‑GAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGcgat > 1:494082/1‑97 (MQ=21) ccggataaggcgTTTACGCCGCATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCA‑‑ATT‑CAACTT‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaa > 1:449408/9‑99 (MQ=21) ccggataaggcgTTCACGCCGCATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑TGAG‑C‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 1:146806/9‑98 (MQ=17) ccggataaggcgTTCACGCCGCATCCGGCCTACAAAACTTTGCAAATTCAATATATTGC‑‑‑AAT‑C‑‑TCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 2:257069/9‑98 (MQ=18) ccGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtt > 1:2028258/1‑100 (MQ=255) ccGGATCCGGCGTTAACGCCTTATCCAGCCTACAAAATTGTGCAAAATCAATTGATTGCA‑CAGC‑T‑‑AGC‑‑GTAGGCCTGATGCGCTACGCTCATCAGGc < 2:1483766/97‑1 (MQ=18) ggataaggcgTTTACGCCGCATCCGGCCTACAAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCC‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttgc > 1:2576818/7‑98 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑TGAG‑C‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:131475/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑A‑‑TTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaatct > 2:756655/7‑96 (MQ=25) ggataaggcgTTCACGCCGCATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑A‑‑TTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaatct > 2:1708710/7‑96 (MQ=25) ggataaggcgTTCACGCCGCATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGAC‑T‑‑AT‑‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCagctt > 2:1239319/7‑96 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAATCATGCAAATCCAAAATATTGCA‑GGAG‑T‑‑TAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttat > 1:1066030/7‑98 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCATAC‑AAATCATGCAAATCCAAAATATTGCA‑GGAG‑A‑‑TAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGACAttta > 1:2756742/7‑98 (MQ=18) aTGGGGCGTTATCGCTTTATAGGGCGAAAAAAATCGTGGAAATTCACTACATTGCA‑GAAT‑T‑‑TTC‑‑GGAGGGCTAATAAGTGGAGCGCATCAGGCATTtttg < 2:1974961/100‑1 (MQ=16) aTGCGGCGTTAACGCCTTATCCGGCCTACAAATTCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:89473/100‑1 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc > 1:895262/1‑100 (MQ=255) cggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct < 1:2913962/100‑1 (MQ=255) cgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg > 2:636789/1‑100 (MQ=255) ttAACGCCTTATCCGGCCTACAAAATCGTGTAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 2:2555109/98‑1 (MQ=255) ttAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc < 2:475307/100‑1 (MQ=255) tAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc > 2:1710077/1‑99 (MQ=255) tAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa < 2:1381428/100‑1 (MQ=255) aCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 1:2420009/100‑1 (MQ=255) cGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCTATCa > 1:2333888/1‑100 (MQ=255) gCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg < 1:1116001/100‑1 (MQ=255) ccTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTTCCTTTGCCATCatt > 2:3045457/1‑98 (MQ=255) ccGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa > 1:1980526/1‑100 (MQ=255) ccGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa < 1:2202677/100‑1 (MQ=255) gCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑TTAGGCCTGATAAGCGTAGCGCATCATGCATTTTTGCCTTTGCCATCAGTCtt < 2:2656694/94‑1 (MQ=255) ccTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc < 2:1831134/100‑1 (MQ=255) ccTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc < 2:1626755/100‑1 (MQ=255) cAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtaga > 1:2102142/1‑97 (MQ=255) aTCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAatt > 2:919909/1‑100 (MQ=255) tCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAatta < 2:388500/100‑1 (MQ=255) cGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattat > 1:1187900/1‑100 (MQ=255) gTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattatt > 2:2082608/1‑100 (MQ=255) gTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattatt > 2:2680400/1‑100 (MQ=255) tGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCTCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 1:997315/100‑1 (MQ=255) tGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGTCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc > 1:2595544/1‑100 (MQ=255) tGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 2:2148835/100‑1 (MQ=255) tGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 1:1549065/100‑1 (MQ=255) gCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc > 2:1093481/1‑99 (MQ=255) gCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg > 2:1334593/1‑100 (MQ=255) gCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg > 2:2894226/1‑100 (MQ=255) gCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg < 1:1476580/100‑1 (MQ=255) aaaTTCAATACATTGCA‑GAAG‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCAGCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAt < 2:2741684/100‑1 (MQ=255) ttCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATaga < 2:1690613/100‑1 (MQ=255) tCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTATATGGCTTTTAATTATTCGATagag > 1:632627/1‑100 (MQ=255) aTACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACg > 2:1666298/1‑100 (MQ=255) cATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGttt > 1:68886/1‑100 (MQ=255) aTTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGtttt > 2:1113891/1‑100 (MQ=255) gCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGa < 1:259708/100‑1 (MQ=255) gCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGa < 1:260192/100‑1 (MQ=255) cA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa > 1:276113/1‑100 (MQ=255) a‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 2:2333861/100‑1 (MQ=255) a‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 2:2391597/100‑1 (MQ=255) gAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCTGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt < 2:68886/100‑1 (MQ=255) gAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt < 2:2233571/100‑1 (MQ=255) aT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGa > 2:2302553/1‑100 (MQ=255) aT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGa > 1:2223029/1‑100 (MQ=255) aT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGa > 2:1879276/1‑100 (MQ=255) tC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGtt < 2:2521330/100‑1 (MQ=255) agtccTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCTATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 1:429393/97‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 2:950906/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 2:701614/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 2:468000/100‑1 (MQ=255) ggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCt > 2:1048013/1‑100 (MQ=255) cTGCTAAGCGCAGCCTATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAAt < 2:1944670/100‑1 (MQ=39) tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAAt > 2:1132205/1‑99 (MQ=255) tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg > 1:2870006/1‑100 (MQ=255) aaGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATc < 2:284376/100‑1 (MQ=255) aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa > 1:2970680/1‑100 (MQ=255) aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa > 2:2172312/1‑100 (MQ=255) cGGAGCGCATCAGGCATTTTTGCCTTTTCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAc > 2:3008719/1‑100 (MQ=255) ggAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc > 2:374413/1‑100 (MQ=255) ggAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc < 1:1816693/100‑1 (MQ=255) gAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc < 1:1786123/99‑1 (MQ=255) | TGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACC > NC_000913/3705949‑3706146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |