| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,950,468 | G→T | 100% | intergenic (+48/‑39) | ilvL → / → ilvX | ilvG operon leader peptide/uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,950,468 | 0 | G | T | 98.0% | 306.1 / ‑1.4 | 103 | intergenic (+48/‑39) | ilvL/ilvX | ilvG operon leader peptide/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base T (50/50); total (53/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.72e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
TGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑GTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATG > NC_000913/3950371‑3950562 | tgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑ttt < 2:941640/100‑1 (MQ=255) gATAATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTATGACTTCCGCACCGAAAGGTCCGGGG‑tttt < 2:1534046/100‑1 (MQ=255) ttattaTCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑tttttt > 1:1434378/1‑100 (MQ=255) attatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCACCGCACCGAAAGGTCCGGGG‑tttttttt > 1:1316438/1‑100 (MQ=255) agtatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑tttttttt < 2:1838662/98‑1 (MQ=255) ttatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGt‑ttttttttt < 1:2212999/100‑1 (MQ=255) ttatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑Ttttttttt < 2:470202/100‑1 (MQ=255) tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTg < 1:2810205/100‑1 (MQ=255) tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGAc > 1:1387966/1‑100 (MQ=255) tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGAc > 1:1748983/1‑100 (MQ=255) ccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGAcat > 2:2000496/1‑98 (MQ=255) ccACCGTACGGGGCTAAACATGGACGAGGAAAGGCATAGAAATCAAGCCTTAACGAACTAAGACCCCCGCACCAAAAAATCCGGGG‑Tatttttt > 2:760979/1‑94 (MQ=255) cACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCtt > 1:2396576/1‑100 (MQ=255) aCCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTa > 2:523827/1‑100 (MQ=255) gTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTaaa < 1:2906711/99‑1 (MQ=255) ggggCTGCACTTGGACGAGGAAAGGCTTAGAGTTCAAGCCTTAACGAATTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACa < 1:1597694/99‑1 (MQ=255) gattaaCTTGGACAAGAAAAGGCTTAGATATCAAGCCATAAAGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTCTTTTGACCTTAAAAACATAAc < 1:437663/95‑1 (MQ=255) tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAAc < 1:2857215/98‑1 (MQ=255) gCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCga > 1:502239/1‑100 (MQ=255) cACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCgag > 1:437081/1‑100 (MQ=255) cACTTGGACGAGAAAAGGCTTAGAGATCAAGCCTTAACGAACTAATACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCga < 2:1458571/99‑1 (MQ=255) aCTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCgagg > 1:1715306/1‑100 (MQ=255) aCTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCgagg < 2:1702684/100‑1 (MQ=255) cTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCgagga > 1:350567/1‑100 (MQ=255) tGGACGAGGAAATGCTTCGAGATCAAGCCTTAACGAACTTAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCgagg < 2:427899/97‑1 (MQ=255) ggACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGAAATTAAAAAAATAACCAAGGAGCa > 1:513763/1‑100 (MQ=255) cGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAg < 1:1604184/98‑1 (MQ=255) cGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGAc < 2:877518/100‑1 (MQ=255) aGGAAAGGCTTAGAGATCGAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACaa > 1:103912/1‑100 (MQ=255) ggAAAGGCTTAGAGATCAAGCGTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAAt < 2:280230/100‑1 (MQ=255) ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACATTAAAAACATAACCGAGGAGCAGACAAt > 1:1475926/1‑100 (MQ=255) ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTATAAACTTAAAAAAATAAAAAAGGAacaaacaa > 1:2111479/1‑99 (MQ=255) aaaGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGa < 2:2297737/100‑1 (MQ=255) aaGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGaa < 2:1895795/100‑1 (MQ=255) ggCTTGGGGATCAAGCCTGAGCGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGa < 2:756893/97‑1 (MQ=255) ggCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAAt > 2:111859/1‑100 (MQ=255) ggCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACTTTAAAAACATAACCGAGGAGCAGACAATGact > 2:940394/1‑97 (MQ=255) ggCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGAAATTAAAAACATAACAGAGGAGCAGAAAATGAATa > 1:2907480/1‑100 (MQ=255) cTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGT‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAc > 1:686608/1‑100 (MQ=255) cTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAAc < 2:1298104/100‑1 (MQ=255) cTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAAACACGGAGAAGACAATGAATAAc > 1:2991583/1‑100 (MQ=255) ttAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAATGGTCCGGGG‑TTTTTTTTTGACCATAAAAACATAACCGAGGAGCAGACAATGAATAAc < 1:940400/99‑1 (MQ=255) tAGAGATCAAGCCTTAACGAACTAAGACTCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAg < 1:1454386/100‑1 (MQ=255) tAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGTCCTTAAAAACATAACCGAGCAGCAAACAATGAATAAAAg > 2:642162/1‑100 (MQ=255) tAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAg > 2:84736/1‑100 (MQ=255) agatATCAAGTATTAACGTAGTAAGACCCCCGCACAGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGc < 1:303529/100‑1 (MQ=255) gataTCAACACTTAACGAAGTGAGGCCCCCGCTCTGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGc < 1:1579445/96‑1 (MQ=255) gaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGcaca > 2:1519570/1‑100 (MQ=255) aTCAAGCCTTAACGAACTAAGACCCCCGCCCCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAAACAAAAAACAAACAATGAATAACAGCACaa > 1:471916/1‑100 (MQ=255) tCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACaaa < 2:648212/100‑1 (MQ=255) aGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTTACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAAt > 2:937106/1‑99 (MQ=255) gCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAAAATAACCGAAGAGAAGACAATGAATAACAGCACAAAATTc > 1:437504/1‑100 (MQ=255) gCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑GGG‑GTTTTTTTTGACCTTAAAAACATAACCGAGGAACAGACAATGAATAAGAGAACAAAAtt > 1:1492811/1‑98 (MQ=255) ccTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAACACAAAAt > 2:1815885/1‑97 (MQ=255) ccTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCAAGGAGCAAACAATGAAAAACAGCACAAAATTc > 1:2571404/1‑99 (MQ=255) cTTAACGAACTAGGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTg > 1:633458/1‑100 (MQ=255) ttAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCt < 1:2696815/98‑1 (MQ=255) ttAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTg < 1:3016912/99‑1 (MQ=255) tAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGtt > 2:2917711/1‑100 (MQ=255) aaggAACTAAGACCCCCGCACCGAAAGGACCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAAt < 2:239367/90‑1 (MQ=255) aaCGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTTACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGttt > 1:501516/1‑100 (MQ=255) aCGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc > 1:2885742/1‑100 (MQ=255) cGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtct > 1:720063/1‑100 (MQ=255) cGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑GTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtct > 2:330826/1‑100 (MQ=255) cGAACTAAGACCCCCGCAACGAAAGGTCCGGGG‑TTTTTTTTGGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtct < 2:2477748/100‑1 (MQ=255) aaCTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCa < 2:2148361/100‑1 (MQ=255) cTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACTTTAAAAAAATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTGTCAAg > 2:769247/1‑100 (MQ=255) cTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa < 1:553715/99‑1 (MQ=255) cTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAg > 1:1125707/1‑100 (MQ=255) tAATACCCCCGGACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCa < 1:1357659/97‑1 (MQ=255) aaGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTTACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGAACAAAATTCTGTTTATCAAGAt > 1:647754/1‑100 (MQ=255) aaGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGAt > 2:512998/1‑100 (MQ=255) gACCTCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGAt < 1:1400499/98‑1 (MQ=255) gACCCCCGCACCGAAAGGTCCGGGT‑TTTTTTTTTGACCTTAAAAACATAACCAAGGAGCAAACAATGAATAAAAGCACAAAATTCTGTTTCTCAAGATTc > 1:2595408/1‑100 (MQ=255) gACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTc > 1:1818307/1‑100 (MQ=255) aCCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCa < 2:1178076/100‑1 (MQ=255) cccccGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAg < 1:980875/100‑1 (MQ=255) cccccGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAg < 2:1434364/100‑1 (MQ=255) ttccgatctgAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg < 2:1454853/91‑1 (MQ=255) cgcGCACTGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg < 1:585185/97‑1 (MQ=255) ccGCACTGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCa < 1:2941501/96‑1 (MQ=255) ccGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGAc > 1:1783496/1‑100 (MQ=255) cGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACg > 1:2330811/1‑100 (MQ=255) gccGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgggg < 2:2495631/99‑1 (MQ=255) ccGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgggg < 1:154544/99‑1 (MQ=255) ccGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACggg > 2:1541293/1‑98 (MQ=255) ccGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGa > 1:2502468/1‑100 (MQ=255) ccGAAAGGTCCGGGG‑TTTTTTGTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgggg < 2:741238/99‑1 (MQ=255) cGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaa < 1:2653731/100‑1 (MQ=255) gAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaac < 1:1004387/100‑1 (MQ=255) gAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaac > 1:536411/1‑100 (MQ=255) aGGGCCGGGG‑TTTTTTTTTGTCCTTAGAAACATAGCCGAGGAGCAGACAATGAATAACAGTACAATATTCTGTTTCTCAAGCTTCAGGACggg < 2:1579419/93‑1 (MQ=255) ggggcGGGG‑TTTTTTTTTGACCTTAAAAAGATAACCGAGGAGCAGACAATGAATAAGAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaac < 2:1984949/96‑1 (MQ=255) ggTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaac < 2:73569/100‑1 (MQ=255) gTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaact < 2:2885710/100‑1 (MQ=255) gTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaact > 1:1949742/1‑100 (MQ=255) gTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaac < 1:2218854/99‑1 (MQ=255) gTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACAGGGaactaa > 1:754257/1‑98 (MQ=255) tCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACTGAGGAGTAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAactaacta < 1:109497/100‑1 (MQ=255) ccggg‑gTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATg > 2:1731172/3‑100 (MQ=255) | TGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑GTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATG > NC_000913/3950371‑3950562 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |