| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,170,338 | (A)6→5 | coding (37/963 nt) | ldtC ← | L,D‑transpeptidase linking Lpp to murein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,170,333 | 0 | A | . | 97.3% | 636.6 / 8.1 | 147 | coding (42/963 nt) | ldtC | L,D‑transpeptidase linking Lpp to murein |
| Reads supporting (aligned to +/- strand): ref base A (1/3); new base . (80/63); total (81/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 154 total aligned reads displayed.
GAAATTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAATTATGG > NC_000913/1170236‑1170431 | gAAATTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaa > 1:2837519/1‑100 (MQ=255) aaaTTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaaa < 2:237656/100‑1 (MQ=255) tttGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaaaacg < 2:1842396/100‑3 (MQ=255) tttGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTaaaaacg < 2:227131/100‑3 (MQ=255) gTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTa < 2:280613/100‑1 (MQ=255) tttCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGc > 2:1281565/1‑100 (MQ=255) ttCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGcc < 2:1993627/100‑1 (MQ=255) ttCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGcc < 2:1902744/100‑1 (MQ=255) ttCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGcc < 2:1993661/100‑1 (MQ=255) cGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGcc < 1:2885895/98‑1 (MQ=255) cGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAg > 1:3011432/1‑100 (MQ=255) gCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGc < 2:905986/100‑1 (MQ=255) ccAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCg > 2:462662/1‑100 (MQ=255) cAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCga > 2:1360224/1‑100 (MQ=255) cAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCga > 1:1668440/1‑100 (MQ=255) cAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCga < 2:2559586/100‑1 (MQ=255) aaCCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCgag < 2:3180686/100‑1 (MQ=255) aCCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCgaga < 2:564166/100‑1 (MQ=255) cgacTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcg > 2:1623865/1‑100 (MQ=255) cgacTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcg < 1:3160754/100‑1 (MQ=255) ccTGGCCGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcgcg > 1:2487511/2‑100 (MQ=255) ccTGGCCGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcgcg > 1:305791/2‑100 (MQ=255) acTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcgcg > 2:2179958/1‑100 (MQ=255) acTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTGGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcgcg > 2:2455652/1‑100 (MQ=255) cTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAAcgcg > 1:488456/1‑99 (MQ=255) tggccGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCCAGAAAAACGCGtt > 1:2395103/4‑100 (MQ=255) ggccGCTGCCGCCAGCGGGCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGttt > 1:877110/3‑100 (MQ=255) gCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGttt > 2:1585699/1‑100 (MQ=255) gCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGttt > 1:2406611/1‑100 (MQ=255) gCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGttt > 2:3179701/1‑100 (MQ=255) cccGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGtttt < 2:1472713/100‑1 (MQ=255) cccGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGtttt > 2:1706116/1‑100 (MQ=255) cTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatc < 1:1315185/100‑1 (MQ=255) cTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatc < 1:3337023/100‑1 (MQ=255) tGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatca < 2:2408916/100‑1 (MQ=255) ggcggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatcat > 2:532474/1‑100 (MQ=255) ggcggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatcat < 2:1653897/100‑1 (MQ=255) ggcggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatcat > 1:3246990/1‑100 (MQ=255) gcggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatcatc < 2:785841/100‑1 (MQ=255) gcggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGatcatc > 2:2293436/1‑100 (MQ=255) cggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGAtcatca > 2:1444583/1‑100 (MQ=255) cggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGAtcatca < 1:268851/100‑1 (MQ=255) cggcAGCGGCCAGGTGTTGGCTTTTGCCGATAGCGCCAGCGCCACTGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGAtcatca > 1:2846735/1‑100 (MQ=255) ggcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCAc > 1:246669/1‑100 (MQ=255) gcAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCAcc < 1:1551264/100‑1 (MQ=255) cAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCAAGGCAGCGGCGAACGT‑AAAACCGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCa > 1:1902498/1‑100 (MQ=255) cGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCaaaa > 2:426243/1‑100 (MQ=255) cGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCaaaa > 2:1084846/1‑100 (MQ=255) ggCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCaaa > 1:232846/1‑98 (MQ=255) gCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAAt > 1:2656428/1‑100 (MQ=255) ccAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATc < 1:1792930/100‑1 (MQ=255) cAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATcc < 1:1933386/100‑1 (MQ=255) aGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCa < 1:3097480/100‑1 (MQ=255) ggTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCat < 1:1149178/100‑1 (MQ=255) gtTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCataat > 2:1227823/1‑100 (MQ=255) gtTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCataat < 1:2607311/100‑1 (MQ=255) gtTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCataat > 2:1281759/1‑100 (MQ=255) ttGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCataata < 1:1331596/100‑1 (MQ=255) tGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCAtaataa > 2:1222879/1‑100 (MQ=255) ggCTGTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATaataaa < 1:2876338/100‑1 (MQ=255) cTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATaataaata > 1:2148459/1‑100 (MQ=255) ttttGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATaataaata < 2:2956205/100‑1 (MQ=255) tttGCCCGTAGCGCCAGCGCCACAACAGCGGCGAACTT‑AAAAACATTAAAAAAAAAAAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAatat < 1:448977/99‑1 (MQ=255) ttGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATaa < 1:2586928/100‑1 (MQ=255) tGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAg < 1:2766562/100‑1 (MQ=255) gCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAgg > 2:1416524/1‑100 (MQ=255) gCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAgg > 2:1347825/1‑100 (MQ=255) gCCGGTAGCGCCAGCGCCACGGCAGCGGCGAAAGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTATAGATCATCACCAAAAATCCATAAAAAATATaa > 1:3013361/1‑98 (MQ=255) ccGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGt > 1:835516/1‑100 (MQ=255) ccGGTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGt > 2:259017/1‑100 (MQ=255) gTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAACACGTTAGCCAGCGAGAAAAACGCGCTTTGATCATAACCAAAAATCCATAATAAATATAAgtgta > 1:3220777/1‑95 (MQ=255) gTAGCGCCAGCGCCACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTa > 1:1720397/1‑99 (MQ=255) agcgccagcgccACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTAttn < 1:2869102/100‑2 (MQ=255) agcgccagcgccACGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTg < 2:2031230/100‑1 (MQ=255) agcgccagcgccACGGCAGCGGCGAACGT‑AAAAACGTTAACCAGCGAGAAAAACGTGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTg < 1:561107/100‑1 (MQ=255) gcgccagcgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGt > 1:2643462/1‑100 (MQ=255) cgccagcgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGta > 2:3339873/1‑100 (MQ=255) gccagcgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGtaa > 1:3304141/1‑100 (MQ=255) ccagcgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGtaat > 1:1807678/1‑100 (MQ=255) agcgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCTAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGtaataa < 1:220517/100‑1 (MQ=255) agcgccaCGGCAGCGGCAAACGT‑AAAAACGTTAGCCAGAGAAAAAAACGCAAAATAATAATGACCAAAATTCCATAATGCGTATAAGTTGATTGt < 1:639164/95‑1 (MQ=255) cgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAAc > 2:2781467/1‑100 (MQ=255) cgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAAc > 1:777281/1‑100 (MQ=255) cgccaCGGCAGCGGCGAACGT‑AAAAACGTTAGACAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAAc < 1:3367134/100‑1 (MQ=255) gccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAAc < 2:402657/99‑1 (MQ=255) gccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACa > 2:814821/1‑100 (MQ=255) ccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAg < 2:2893673/100‑1 (MQ=255) ccaCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAg > 1:411160/1‑100 (MQ=255) caCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGa < 2:688712/100‑1 (MQ=255) caCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGa < 1:923328/100‑1 (MQ=255) aCGGCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGa < 1:2895633/99‑1 (MQ=255) ggCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATaa > 2:599785/1‑100 (MQ=255) gCAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAg < 1:1947687/100‑1 (MQ=255) cAGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGc > 2:164157/1‑100 (MQ=255) aGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGcc < 2:1914296/100‑1 (MQ=255) aGCGGCGAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATAAACAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGcc < 1:884370/100‑1 (MQ=255) cggcgAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTg > 2:467548/1‑100 (MQ=255) ggcgAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTg > 1:3321329/1‑100 (MQ=255) cgAACGT‑AAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAAt < 1:1079789/100‑1 (MQ=255) tAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAATTatgg < 1:2308282/100‑1 (MQ=255) | GAAATTTGTTTTCGCCAACCAGACGACTGCCCGCTGGCGGCAGCGGCCAGGTGTTGGCTTTTGCCGGTAGCGCCAGCGCCACGGCAGCGGCGAACGTAAAAAACGTTAGCCAGCGAGAAAAACGCGTTTTGATCATCACCAAAAATCCATAATAAATATAAGGTTATTGTAATAAACAGATAAGCCTGAATTATGG > NC_000913/1170236‑1170431 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |