| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,296,060 | 0 | C | T | 27.3% | 231.3 / 100.8 | 140 | intergenic (+266/+376) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Reads supporting (aligned to +/- strand): ref base C (52/49); new base T (15/23); total (68/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.50e-01 | |||||||||||
Only 100 of 141 total aligned reads displayed.
TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCG > NC_000913/4295962‑4296159 | ttAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATGAACg > 2:458134/1‑100 (MQ=17) tAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGc < 1:2082308/100‑1 (MQ=18) tAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACg > 2:1791579/1‑99 (MQ=32) tAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGc > 1:2000532/1‑100 (MQ=32) aaCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGcc > 2:1193833/1‑100 (MQ=18) aCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCt < 1:1671090/100‑1 (MQ=33) aCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAAGTCGGATAAGGCGTTTACGCCGCATCC‑GACACCAACGCCt > 1:1011455/1‑100 (MQ=12) cgcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTg > 1:795297/1‑100 (MQ=32) cgcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTg > 2:1908412/1‑100 (MQ=33) cgcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTg > 1:2247422/1‑100 (MQ=33) cgcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTg < 1:1142884/100‑1 (MQ=33) gcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGa < 1:1392767/100‑1 (MQ=18) gcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGa > 1:300213/1‑100 (MQ=33) gcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGa > 1:1523386/1‑100 (MQ=32) cgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGa < 2:1071453/99‑1 (MQ=18) gTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATg < 2:1871040/100‑1 (MQ=33) gTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATg < 2:189034/100‑1 (MQ=33) tCTTATGAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGcc < 2:302156/94‑1 (MQ=18) tCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGc > 1:2279926/1‑100 (MQ=33) tCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGc > 1:217121/1‑100 (MQ=33) cTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCg > 1:2013239/1‑100 (MQ=18) tATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGAc > 1:1005693/1‑100 (MQ=33) aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACg > 2:328882/1‑100 (MQ=18) aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACg > 1:1749249/1‑100 (MQ=18) aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACg > 2:1592241/1‑100 (MQ=18) aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACg > 2:770124/1‑100 (MQ=32) tCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGc > 2:247349/1‑100 (MQ=18) cAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCGACGCCTGATGCg > 2:350421/1‑95 (MQ=17) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTg < 1:1830208/100‑1 (MQ=25) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTg < 2:427155/100‑1 (MQ=35) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTg > 1:1731822/1‑100 (MQ=35) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTg > 2:1238392/1‑100 (MQ=35) gcTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGcc < 2:1413966/99‑1 (MQ=255) ccTACGCCAGATAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCAGCATCC‑GACATCAACGCCGGATGCGACGCTTGc > 2:1231055/1‑99 (MQ=255) cTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCcg < 2:158118/100‑1 (MQ=25) tACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCcgc < 2:1263994/100‑1 (MQ=25) tACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCcgc > 2:400049/1‑100 (MQ=25) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCcgcg < 1:1238395/100‑1 (MQ=40) gCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCcgcg < 2:756819/98‑1 (MQ=40) ccAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCt > 2:744203/1‑100 (MQ=40) ccAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCt < 1:2072804/100‑1 (MQ=255) cagacagaGCAAAGGCGTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCCGCGTc < 1:1379785/98‑1 (MQ=11) cAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCCGCGTCtt > 2:2101365/1‑100 (MQ=25) aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGNGTTTNCGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCCGCGTCttn < 1:861281/100‑2 (MQ=255) aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCCGCGTCTTa < 1:300835/100‑1 (MQ=25) cAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCa > 2:1641793/1‑100 (MQ=40) cAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCa < 2:1523382/100‑1 (MQ=255) aGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAAGGCCGGGTGCGTCGCTTGCCGCGTCTTATCAg > 2:734836/1‑100 (MQ=14) aGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAg > 1:513094/1‑100 (MQ=255) gcgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCC‑GACATCAACGCCTGATGGGAGGCTTGCGGCGTCTTATCAgg > 2:1756913/1‑100 (MQ=11) gcgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAgg > 1:2116950/1‑100 (MQ=255) cgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc < 1:328884/100‑1 (MQ=25) cgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc < 1:1193836/100‑1 (MQ=25) cgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc < 1:730607/100‑1 (MQ=25) gcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc < 1:1436857/100‑1 (MQ=25) gcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc < 1:1436911/100‑1 (MQ=25) cAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt > 2:1161963/1‑100 (MQ=40) gCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGcc > 1:475059/1‑100 (MQ=255) ccTGGTTTAGTATGCTTTTGTAGATTGTTTAACGCGTTTACGCC‑CTTCCGGTCATCAACGCCTGATGCGACGCTTGTCGCGTCTTATCAGGCCTACGcc < 2:1362818/99‑1 (MQ=2) ccTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatctta < 2:1520524/100‑6 (MQ=2) cTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAg < 2:217119/100‑1 (MQ=255) tGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatcttatc < 1:1585503/100‑8 (MQ=11) gATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAg < 1:1078428/98‑1 (MQ=255) gATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGAc < 1:1146642/100‑1 (MQ=255) ttAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAgc > 2:1656377/1‑100 (MQ=40) aGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAgcgc > 2:85079/1‑100 (MQ=255) gCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCa < 1:102910/100‑1 (MQ=255) cGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCaa < 1:770125/100‑1 (MQ=255) gTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAAt > 1:2153112/1‑100 (MQ=255) aTTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAg < 2:1221887/99‑1 (MQ=255) aTTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGc < 1:1908419/100‑1 (MQ=255) ttGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTg < 2:2112156/100‑1 (MQ=40) tGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGa < 1:350423/100‑1 (MQ=255) tAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAtt < 2:300211/100‑1 (MQ=40) aGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAttt > 1:349301/1‑100 (MQ=255) ggTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTa > 1:175024/1‑100 (MQ=255) gTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAg > 1:875507/1‑100 (MQ=255) tccgATAAGCCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTTCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc < 2:880993/97‑1 (MQ=255) tCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATCGCCTGATTTGGc > 2:247341/1‑100 (MQ=255) tCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc < 2:1833084/100‑1 (MQ=255) cGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc < 2:1731817/99‑1 (MQ=40) cGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCg > 2:2220512/1‑100 (MQ=40) gATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg < 1:1328831/100‑1 (MQ=255) aaGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAgagatcgg > 2:531673/1‑93 (MQ=255) aaGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAtt < 2:1979613/100‑1 (MQ=255) aGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAtt > 2:1483913/1‑99 (MQ=255) ggCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAtttt > 1:1509241/1‑100 (MQ=255) cGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGt < 2:1509237/100‑1 (MQ=17) gcttACGCCCCATCC‑GACACCAACCCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTa < 2:1836683/98‑1 (MQ=14) tttACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAg < 2:1030349/100‑1 (MQ=40) gccgcATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCgg > 1:1814795/1‑100 (MQ=38) ccgcATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGa < 1:815550/100‑1 (MQ=38) cgcATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGAt < 1:2240782/100‑1 (MQ=38) gcATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATa < 1:734837/100‑1 (MQ=38) tCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAgg > 1:1271478/1‑100 (MQ=38) c‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCg > 1:1383813/1‑100 (MQ=38) cAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATg > 2:798439/1‑100 (MQ=33) cAACGCCCGACGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATg < 2:1005691/100‑1 (MQ=16) aaCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGc > 2:1756919/1‑100 (MQ=32) aaCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGc > 2:198836/1‑100 (MQ=17) | TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCC‑GACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCG > NC_000913/4295962‑4296159 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |