Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,706,0480GT25.7% 627.0 / 182.9 254intergenic (‑258/+50)dppB/dppAdipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor
Reads supporting (aligned to +/- strand):  ref base G (85/97);  new base T (63/0);  total (156/98)
Fisher's exact test for biased strand distribution p-value = 1.94e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.20e-01

Only 100 of 261 total aligned reads displayed.

TGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACCA  >  NC_000913/3705949‑3706147
                                                                                                       |                                                                                                   
tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGTCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCgg                                                                                                     <  2:1062575/100‑1 (MQ=255)
  cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAg                                                                                                   <  2:3650042/100‑1 (MQ=255)
    gcttttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGCA‑GAGAT‑CAT‑GTAGGCCTGATAAGCGTAgcg                                                                                                 >  2:3824214/11‑100 (MQ=17)
      ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCa                                                                                               <  2:3344152/100‑1 (MQ=255)
       tGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCAt                                                                                              <  2:328261/100‑1 (MQ=255)
        gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATc                                                                                             <  2:3614070/100‑1 (MQ=255)
         tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCa                                                                                            >  1:551396/1‑100 (MQ=255)
         tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCa                                                                                            <  1:635868/100‑1 (MQ=255)
         tgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCA‑GG‑GA‑CTATGTAGGCCTGATAAGCATAGCGCATCa                                                                                            >  1:3775130/6‑100 (MQ=18)
          ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAg                                                                                           <  1:1400378/100‑1 (MQ=255)
          ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAg                                                                                           <  1:608100/100‑1 (MQ=255)
          gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAACAGTGCAAATTCAATATATTGCA‑AT‑CT‑TCTGGTAGGCCTGATAAGCATCGCGCATCAg                                                                                           >  1:3268704/5‑100 (MQ=18)
          gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAg                                                                                           >  2:3565083/5‑100 (MQ=21)
          gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAg                                                                                           >  1:396772/5‑100 (MQ=21)
           taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CCTCGTAGGCCTGATAAGCGTAGCGCATCAgg                                                                                          >  1:2040539/4‑100 (MQ=21)
           tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCG‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAgg                                                                                          >  1:2936101/1‑100 (MQ=255)
            aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GA‑AA‑CCTTGTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                         >  2:968270/3‑100 (MQ=17)
            aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAGTTCGTGCAAATTCAATAAATTGCA‑‑A‑TA‑TGACGTAGGCCTGATAAGCGTAGCGCATCAGGcg                                                                                        >  1:3600999/3‑99 (MQ=21)
            aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGCA‑GAGAT‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                         >  2:2802287/3‑100 (MQ=17)
            aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGCA‑GG‑AA‑ACACGTAGGCCTGATAAGCGAAGCGCATCAGGc                                                                                         >  2:2604278/3‑100 (MQ=18)
            aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCA‑GA‑GA‑TTATGTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                         >  2:2455682/3‑100 (MQ=17)
             ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGCATGG‑GC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                                                        >  1:2678399/2‑100 (MQ=17)
             ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑AC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                                                        >  2:1461546/2‑100 (MQ=18)
             ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGAT‑CG‑AT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                                                        >  1:3734885/2‑100 (MQ=21)
             ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                                                        >  1:2089800/2‑100 (MQ=21)
             ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCATGAAAATTCAATACATTGCA‑AG‑AT‑TTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                                                        >  1:488733/2‑100 (MQ=17)
             ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCA‑GAGAT‑TAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                                                        >  2:3098883/2‑100 (MQ=17)
              gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAtt                                                                                      >  2:3950438/1‑100 (MQ=18)
              gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGAT‑CG‑AT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAGGCag                                                                                       >  1:3317680/1‑99 (MQ=21)
              gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACCTGCAAATTCAATATATTGCA‑GG‑AT‑ACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCaa                                                                                       >  1:1207656/1‑99 (MQ=17)
               ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCaat                                                                                      >  1:973996/9‑98 (MQ=25)
               ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCaat                                                                                      >  1:2018865/9‑98 (MQ=21)
               ccggataaggcgTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAtt                                                                                      >  1:752138/9‑100 (MQ=18)
               ccGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAtt                                                                                      >  1:4021250/1‑100 (MQ=255)
               ccGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAtt                                                                                      >  2:2626641/1‑100 (MQ=255)
               ccGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCa                                                                                        >  1:2346837/1‑98 (MQ=17)
                cggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGCATGG‑GC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAatt                                                                                     >  1:3198393/8‑100 (MQ=18)
                cggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCaatt                                                                                     >  1:4058278/8‑97 (MQ=21)
                cggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAatt                                                                                     >  1:241319/8‑100 (MQ=21)
                 ggataaggcgTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑AC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt                                                                                    >  2:3601412/7‑100 (MQ=18)
                 ggataaggcgTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GG‑CT‑CCACGTAGGCCTGATAAGCGTAACGCATCAGGCa                                                                                        >  1:1913010/7‑96 (MQ=18)
                 ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGCA‑TG‑AG‑CCACGTAGGCCTGAT‑AGCGTAGCGCATCAGGCAgtttt                                                                                   >  2:2833543/7‑100 (MQ=17)
                 ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCA‑GG‑GA‑CTATGTAGGCCTGATAAGCATAGCGCATCAGGCagctt                                                                                    >  1:294467/7‑96 (MQ=18)
                 ggataaggcgTTCACGCCGCATCCAGCCTAC‑AAAATTGTGCAAAATCAATGGATTGCA‑CA‑GC‑TAGCGTAGGCCTGATAAGCGTAGCGCATCAGGCagatt                                                                                    >  1:3019228/7‑96 (MQ=37)
                  gataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GG‑AG‑CTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAgtttg                                                                                   >  1:2136043/6‑99 (MQ=18)
                   ataaggcgTTCACGCCGCATCCGGCGTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GG‑CT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTtttg                                                                                  >  1:3532836/5‑100 (MQ=21)
                    taaggcgTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCA‑GAGAT‑TAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAATtttgc                                                                                 >  1:448749/4‑100 (MQ=17)
                    tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc                                                                                 <  1:3118673/100‑1 (MQ=255)
                    tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAGTtttgc                                                                                 >  1:2311322/1‑100 (MQ=255)
                     gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc                                                                                <  1:2574081/100‑1 (MQ=255)
                        gcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgccttt                                                                             >  2:1833528/1‑100 (MQ=255)
                         cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg                                                                            <  2:45364/100‑1 (MQ=255)
                         cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg                                                                            >  1:3807733/1‑100 (MQ=255)
                              aCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc                                                                       <  2:796956/100‑1 (MQ=255)
                                gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg                                                                     <  1:1320442/100‑1 (MQ=255)
                                gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg                                                                     >  1:3434082/1‑100 (MQ=255)
                                      tCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGt                                                               <  1:1501827/100‑1 (MQ=255)
                                        cGGCCTAC‑AACATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCAGCATGCATTTTTGCCTTTGCCATCAGTCTTGTAt                                                             <  2:2746156/100‑1 (MQ=255)
                                        cGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt                                                             >  1:2289597/1‑100 (MQ=255)
                                        cGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt                                                             >  1:3933405/1‑100 (MQ=255)
                                        cGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAACGCATCAGGCATTTTTGCCTTTGCCATCAGTCtagcat                                                             >  2:3815221/1‑95 (MQ=255)
                                             tAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt                                                        >  1:1974271/1‑100 (MQ=255)
                                              aC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt                                                       >  1:1060223/1‑100 (MQ=255)
                                               c‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt                                                      <  2:1591762/100‑1 (MQ=255)
                                                 aaaaTCGGGTAAATTCAATACATTGCA‑GA‑AT‑TTTCTTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt                                                      <  1:3850886/99‑1 (MQ=255)
                                                        tGCAAATTCAATATATTGCA‑AA‑AT‑TTTCGTAGGCATGATAAGCGGAGCTCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc                                              <  1:2550227/100‑1 (MQ=25)
                                                         gCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGTATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg                                             >  1:263994/1‑100 (MQ=255)
                                                            aaTTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATa                                          >  2:2302028/1‑100 (MQ=255)
                                                             aTTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag                                         <  1:2171886/100‑1 (MQ=255)
                                                             aTTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag                                         <  2:605597/100‑1 (MQ=255)
                                                             aTTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag                                         <  2:1988756/100‑1 (MQ=255)
                                                             aTTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTCCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag                                         <  2:1236050/100‑1 (MQ=255)
                                                              ttCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATaga                                        <  2:3200577/100‑1 (MQ=255)
                                                               tCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATagag                                       <  2:1136241/100‑1 (MQ=255)
                                                                  aTACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACg                                    <  2:3450344/100‑1 (MQ=255)
                                                                        tGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCg                              <  1:3461035/100‑1 (MQ=255)
                                                                         gCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGa                             <  2:2482819/100‑1 (MQ=255)
                                                                          cA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa                            >  2:1438454/1‑100 (MQ=255)
                                                                          cA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa                            <  1:2842304/100‑1 (MQ=255)
                                                                          cA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa                            >  1:1606266/1‑100 (MQ=255)
                                                                          cA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa                            >  2:1977018/1‑100 (MQ=255)
                                                                           a‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg                           <  2:2313226/100‑1 (MQ=255)
                                                                           a‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg                           <  2:407990/100‑1 (MQ=255)
                                                                              a‑aT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTGTGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTg                         <  2:2231824/100‑1 (MQ=255)
                                                                                   tttCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATg                      <  2:1948776/100‑1 (MQ=255)
                                                                                      cGTAGGACTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGttt                   <  1:1438465/100‑1 (MQ=255)
                                                                                       gTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTg                  <  2:2973451/100‑1 (MQ=255)
                                                                                         aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc                <  1:1748458/100‑1 (MQ=255)
                                                                                          ggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCt               >  2:473087/1‑100 (MQ=255)
                                                                                          ggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCATTTGCAAGCAGAGTTATATGGCTTTTAATTATTCGATAGAGAGGTTTTCGAATAGATGttt                   >  2:3482099/1‑96 (MQ=25)
                                                                                            ccTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTaa             >  1:1129154/1‑100 (MQ=255)
                                                                                              tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg           <  2:4140761/100‑1 (MQ=255)
                                                                                               gATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATgg          >  1:1007129/1‑100 (MQ=255)
                                                                                               gATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg           >  2:1659619/1‑99 (MQ=255)
                                                                                                aTAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGa         <  2:875377/100‑1 (MQ=255)
                                                                                                 tAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGAt        >  2:2174113/1‑100 (MQ=255)
                                                                                                   aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa      >  1:887784/1‑100 (MQ=255)
                                                                                                     cGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAc    <  2:2369092/100‑1 (MQ=255)
                                                                                                      ggAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc   <  2:3933362/100‑1 (MQ=255)
                                                                                                       gAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACca  <  2:3995247/100‑1 (MQ=255)
                                                                                                       |                                                                                                   
TGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACCA  >  NC_000913/3705949‑3706147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑