New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4040482 =NA (NA)51 (0.390) 10/166 NT NA intergenic (+59/‑35) rrlA/rrfA 23S ribosomal RNA of rrnA operon/5S ribosomal RNA of rrnA operon
?NC_000913 4040506 = NA (NA)intergenic (+83/‑11) rrlA/rrfA 23S ribosomal RNA of rrnA operon/5S ribosomal RNA of rrnA operon

Only 100 of 130 total aligned reads displayed.

GCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4040586‑4040482
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC  >  NC_000913/4040506‑4040604
                                                                                                                                                                                                            
GCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGTGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTT                                                                                                          <  1:3070656/100‑1
GCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTT                                                                                                          <  1:746272/100‑1
 CGCTACGGCGTTTCACTTCTGAGTTCGTCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTC                                                                                                         <  2:2571604/100‑1
 CGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCTCCAGACAAATTCTGATTTATCAGACCGCTTCTGCGTTC                                                                                                         >  1:265485/1‑100
 CGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTC                                                                                                         <  1:1781149/100‑1
 CGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTC                                                                                                         <  1:3177666/100‑1
 CGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTC                                                                                                         <  1:2168682/100‑1
 CGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTC                                                                                                         >  2:3672170/1‑100
  GCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCT                                                                                                        <  1:1573301/100‑1
  GCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCT                                                                                                        >  1:1597071/1‑100
  GCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCT                                                                                                        <  2:2156533/100‑1
  GCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCT                                                                                                        <  2:2560584/100‑1
   CTACGGCGTTTCTCTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTG                                                                                                       <  1:369495/100‑1
   CTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTG                                                                                                       >  1:3468613/1‑100
   CTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTG                                                                                                       >  2:3047036/1‑100
   CTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTG                                                                                                       <  2:3578764/100‑1
   CTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCACGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTG                                                                                                       >  1:3198940/1‑100
    TACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGA                                                                                                      <  2:1644086/100‑1
    TACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGA                                                                                                      <  1:1123477/100‑1
    TACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGA                                                                                                      <  2:1383617/100‑1
    TACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGA                                                                                                      <  2:1250878/100‑1
    TACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGA                                                                                                      <  2:2736309/100‑1
    TACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGA                                                                                                      >  1:3323514/1‑100
     ACGGCGTTTCACTTCTGAGTTCGTTATGGGGTCAGGTGGGACAACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGAT                                                                                                     <  1:660202/100‑1
     ACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGAT                                                                                                     <  1:3717250/100‑1
     ACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGAT                                                                                                     >  2:3519446/1‑100
      CGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGTCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGAT                                                                                                     <  1:3900060/99‑1
      CGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGA                                                                                                      <  2:3356534/98‑1
          GTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAACGCAGAAGCGGTCTGATAAAAC                                                                                                <  2:1483715/100‑1
           TTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAACGCAGAAGCGGTCTGATAAAACA                                                                                               <  1:3351311/100‑1
           TTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAACGCAGAAGCGGTCTGATAAAAC                                                                                                <  1:3713680/99‑1
            TTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAACGCAGAAGCGGTCTGATAAAACAG                                                                                              <  2:1711620/100‑1
             TCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAACGCAGAAGCGGTCTGATAAAACAGA                                                                                             <  2:1610041/100‑1
                                                                 AGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC                                         >  1:83075/1‑100
                                                                  GGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCA                                        >  2:3334786/1‑100
                                                                         TCTGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGA                                 >  2:392344/1‑100
                                                                         TCTGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGA                                 >  2:3231960/1‑100
                                                                          CTGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA                                >  2:13602/1‑100
                                                                          CTGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA                                >  1:3379066/1‑100
                                                                          CTGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA                                >  1:104490/1‑100
                                                                          CTGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA                                >  1:2905307/1‑100
                                                                          CTGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA                                >  1:3721312/1‑100
                                                                          CTGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTAACACCTGACCCCATGCCGAACTCAGAAGTTAA                                >  2:2668162/1‑100
                                                                          CTGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA                                >  1:2844026/1‑100
                                                                          CTGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA                                >  1:2499281/1‑100
                                                                          CTGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCAGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA                                >  1:2875588/1‑100
                                                                          CTGTTTCATCAGACCGCTTCTGCGTTCTGATGAAACAGAATTTGCCTGTCGGCCGTAGCACGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA                                >  1:915978/1‑100
                                                                          CTGTTTCATCAGACCGCTTCTGCGTTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA                                >  1:2308108/1‑100
                                                                           TGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAA                               >  2:286125/1‑100
                                                                           TGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAA                               >  2:1279321/1‑100
                                                                           TGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAA                               >  1:2896986/1‑100
                                                                           TGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAA                               >  1:624630/1‑100
                                                                           TGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTCGTCCCACCTGACCCCATCCCGAACTCAGAAGTGAAA                               >  2:2858036/1‑100
                                                                           TGTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTACCTGGCGGCAGTAGCGCGGTGGTCTCACCTGACCCTATGCCGAACTCAGAAGTGAAA                               >  2:2529097/1‑100
                                                                            GTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAC                              >  1:3333162/1‑100
                                                                            GTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTAAGAAGTGAAAC                              >  1:1618327/1‑100
                                                                            GTTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTACCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAC                              >  2:190343/1‑100
                                                                            GTTTTATCAGACCGCTTCTACGTTATGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAC                              >  2:2065374/1‑100
                                                                            GTTTCATCAGACCGCTTCTGCGTTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAC                              >  1:2377773/1‑100
                                                                             TTTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCACACCTGACGCCATGCCGAACTCAGAAGTGAAACG                             >  2:1936291/1‑100
                                                                              ttcATCAGACCGCTTCTGCGTTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGC                            >  2:70495/4‑100
                                                                              TTTATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGC                            >  1:2132189/1‑100
                                                                               tcATCAGACCGCTTCTGTGTTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCC                           >  2:1407629/3‑100
                                                                                 ATCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCATGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGC                            >  2:3668201/1‑97
                                                                                  TCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTA                        >  1:3078220/1‑100
                                                                                  TCAGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTA                        >  1:1207951/1‑100
                                                                                    AGACCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGC                      >  2:2185962/1‑100
                                                                                       CCGCTTCTGCGTTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCC                   >  1:139827/1‑100
                                                                                                   TCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTG       >  2:2823167/1‑100
                                                                                                    CTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGG      >  2:525123/1‑100
                                                                                                    CTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGATCCAACCTGACCCCATGCCGAACTCAAAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGG      >  2:294347/1‑100
                                                                                                     TGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGG     <  1:2849548/100‑1
                                                                                                     TGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGG     >  1:3067892/1‑100
                                                                                                     TGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGG     <  1:135145/100‑1
                                                                                                     TGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGG      >  2:2978191/1‑99
                                                                                                     TGATAAAACAGAATTTGCCTGGCGGCAGTAGCCCGGTGGTCCCACCTGACCCCATGCCGACCCCAGAAGTGAAACCCCGTAGCGCCGATGGCAGCGTGGG     >  2:1716481/1‑100
                                                                                                      GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG    <  1:1418869/100‑1
                                                                                                      GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG    <  2:468303/100‑1
                                                                                                      GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG    >  2:119560/1‑100
                                                                                                      GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG    <  2:2710689/100‑1
                                                                                                      GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG    >  2:2346935/1‑100
                                                                                                      GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG    >  1:3224827/1‑100
                                                                                                      GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG    >  1:2194916/1‑100
                                                                                                      GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG    >  1:1294428/1‑100
                                                                                                      GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG    <  1:3555126/100‑1
                                                                                                      GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGG      >  1:616001/1‑98
                                                                                                      GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAATGAAAAGCCGTAGCGCCGATGGTAGTGTG       >  1:2334242/1‑97
                                                                                                      GATAAAACAGAATTGGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG    <  2:379279/100‑1
                                                                                                       ATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGT   <  2:1062408/100‑1
                                                                                                       ATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGT   <  2:3887445/100‑1
                                                                                                       ATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG    <  1:1907035/99‑1
                                                                                                       ATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGAGCCGATGATAGTGTGGGGT   >  1:945025/1‑100
                                                                                                        TAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGATCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC  <  1:424247/100‑1
                                                                                                        TAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC  >  1:404371/1‑100
                                                                                                        TAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC  >  1:3115780/1‑100
                                                                                                        TAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC  <  1:1766042/100‑1
                                                                                                        TAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC  <  1:1987511/100‑1
                                                                                                        TAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC  >  2:691773/1‑100
                                                                                                        TAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCACACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGG    >  2:2412646/1‑98
                                                                                                        TAAAACAGAATTTGACTAGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGT   >  2:1135190/1‑99
                                                                                                                                                                                                            
GCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4040586‑4040482
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgatAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC  >  NC_000913/4040506‑4040604

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.