| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 3,596,220 | (TCA)3→2 | 61.9% | coding (182‑184/927 nt) | livH ← | branched‑chain amino acid ABC transporter permease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3596215 = | 35 (0.400) | 51 (0.640) | 42/162 | NT | 61.9% | coding (189/927 nt) | livH | branched‑chain amino acid ABC transporter permease |
| ? | NC_000913 | = 3596211 | 31 (0.390) | coding (193/927 nt) | livH | branched‑chain amino acid ABC transporter permease | |||||
Only 100 of 101 total aligned reads displayed.
GTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCA > NC_000913/3596116‑3596312 | gcggtaagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccc > 1:835294‑M1/100‑100 (MQ=255) cggtaagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccca < 1:1042970‑M1/2‑1 (MQ=255) ggtaagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgcccat < 1:1631101‑M1/3‑1 (MQ=255) taagccacccgttcgatactccatccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgcccatc > 2:357920‑M1/96‑99 (MQ=255) taagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgcccatca > 1:2022589‑M1/96‑100 (MQ=255) aagccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgcccatca < 1:1331603‑M1/5‑1 (MQ=255) agccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCatcatc < 2:123354‑M1/7‑1 (MQ=255) gccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCAtcatca < 1:1294216‑M1/8‑1 (MQ=255) gccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCAtcatca > 2:1987053‑M1/93‑100 (MQ=255) gccacccgttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCAtcatca < 2:1928764‑M1/8‑1 (MQ=255) aCCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCAtcatcatca > 1:1445095/1‑100 (MQ=255) cccGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAg < 1:1887523/100‑1 (MQ=255) ccGTTCGATACCCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAgc < 2:2099462/100‑1 (MQ=255) gTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAgcgc > 2:2177187/1‑100 (MQ=255) gttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCagcgcgac > 2:547180‑M1/86‑98 (MQ=255) gttcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCgcggc > 2:496675‑M1/86‑100 (MQ=255) gATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCgcggcg > 2:465239/1‑100 (MQ=255) tcgatactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCga > 1:458092‑M1/84‑100 (MQ=255) aCTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCgatg < 1:1700933/100‑1 (MQ=255) atactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCgatga > 1:900543‑M1/81‑100 (MQ=255) atactccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccaaccggtatcaatgccCATCATCAGCGCGGCgatga > 1:1778605‑M1/81‑100 (MQ=255) ccAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATc > 1:1943882/1‑100 (MQ=255) ccAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATc < 2:582934/100‑1 (MQ=255) ccAGCCGTAGGCGCCGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATc < 2:1603166/100‑1 (MQ=255) actccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATc > 1:1733905‑M1/79‑100 (MQ=255) ctccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATc > 2:861079‑M1/78‑99 (MQ=255) ctccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCa < 1:1548880‑M1/23‑1 (MQ=255) ctccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCa < 1:2063580‑M1/23‑1 (MQ=255) cAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCa > 1:1184569/1‑100 (MQ=255) tccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCAt > 2:982636‑M1/77‑100 (MQ=255) ccagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCCTCATCACCGCGGCGATGATCATa < 2:375944‑M1/25‑1 (MQ=255) cagccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtctcaatgccCATCATCAGCGCGGCGATGATCATaa < 1:192474‑M1/26‑1 (MQ=255) cGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATaaa < 2:1631090/100‑1 (MQ=255) gccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAAt < 2:578154‑M1/28‑1 (MQ=255) gccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAAt < 2:575366‑M1/28‑1 (MQ=255) tAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATg < 2:1181385/100‑1 (MQ=255) ccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtctcaatgccCATCATCAGCGCGGCGCTGATCataact < 2:468599‑M1/28‑3 (MQ=255) ccgtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATg > 2:2058914‑M1/72‑100 (MQ=255) gtaggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATgag > 1:356452‑M1/70‑100 (MQ=255) taggcgctggcaatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATgaga > 1:1458726‑M1/69‑100 (MQ=255) cgcTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGAc < 1:19457/100‑1 (MQ=255) cAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCt > 2:1816947/1‑100 (MQ=255) tGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGcc < 2:1294210/100‑1 (MQ=255) caatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGcc > 2:632087‑M1/59‑100 (MQ=255) aatgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCa > 2:628210‑M1/58‑100 (MQ=255) atgacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCaa < 1:2092415‑M1/44‑1 (MQ=255) cGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAAt > 1:345153/1‑100 (MQ=255) gacgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATc < 1:967646‑M1/46‑1 (MQ=255) acgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCa > 1:915914‑M1/54‑100 (MQ=255) acgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCa > 2:1888023‑M1/54‑100 (MQ=255) acgattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCa > 1:786760‑M1/54‑100 (MQ=255) gattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCata > 1:578157‑M1/52‑100 (MQ=255) gattgcgccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCata > 1:575369‑M1/52‑100 (MQ=255) attgcgccgacgaataccgcagcgaccagcagccagacggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCat > 2:1059656‑M1/51‑98 (MQ=255) ccGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGCGACGTAGCTGCCAATCATATaaa > 2:318420/1‑100 (MQ=255) ccGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATaaa < 2:1737108/100‑1 (MQ=255) cgacgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAAc < 1:965482/100‑1 (MQ=255) gccgacgaatcccgcagctaccagcagccagccggtatcaattccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAAcc > 1:403483‑M1/46‑100 (MQ=255) ccgacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCt < 1:1437945‑M1/56‑1 (MQ=255) gacgaattccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCg < 2:1235437‑M1/58‑1 (MQ=255) gacgaatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCg > 1:358805‑M1/43‑100 (MQ=255) aaTCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGc < 2:661156/100‑1 (MQ=255) aatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGt > 1:927949‑M1/39‑100 (MQ=255) aatcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGt < 2:1615541‑M1/62‑1 (MQ=255) ccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTg > 1:282682/1‑100 (MQ=255) ccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTg > 1:1335366/1‑100 (MQ=255) atcccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTg < 2:973319‑M1/63‑1 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg < 2:1531460‑M1/65‑1 (MQ=255) cccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTggg > 1:155827‑M1/36‑100 (MQ=255) ccgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGc < 1:213621‑M1/66‑1 (MQ=255) cAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGc < 1:1615909/100‑1 (MQ=255) cAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGc < 2:1042965/100‑1 (MQ=255) cgcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCg < 1:1258627‑M1/67‑1 (MQ=255) aGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCg < 2:2257542/100‑1 (MQ=255) gcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGa > 2:1563166‑M1/33‑100 (MQ=255) gcagctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGa > 2:2164576‑M1/33‑100 (MQ=255) agctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAg < 1:26866‑M1/70‑1 (MQ=255) agctaccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAg > 1:123355‑M1/31‑100 (MQ=255) aCCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGt > 2:1437981/1‑100 (MQ=255) agcagcCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGa < 1:2177206/100‑1 (MQ=255) ccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGAt < 1:64075‑M1/75‑1 (MQ=255) ccagcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGAt > 1:636138‑M1/26‑100 (MQ=255) agcagccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCa > 1:660876‑M1/24‑100 (MQ=255) cagccGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGc > 2:712128/1‑100 (MQ=255) cagccGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGc > 1:1366302/1‑100 (MQ=255) agccGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGcc < 2:2179210/100‑1 (MQ=255) ccagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCg > 2:1803164‑M1/19‑100 (MQ=255) cagccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGa < 1:1313887‑M1/83‑1 (MQ=255) gccggtatcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATa < 1:788264‑M1/85‑1 (MQ=255) aTCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATg > 1:295534/1‑100 (MQ=255) tCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGc < 1:1501918/100‑1 (MQ=255) gtatcaataccCATCATCAGCGCGGCGATGTTCATAAATGAGACTTAGCTGCCAATCATATAACCCTCGCGGTGGGCGAAGTTGATCATGCCGATAATGc > 2:1104058‑M1/12‑100 (MQ=255) atcaatgccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCg < 1:486194‑M1/91‑1 (MQ=255) aaTGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCg < 2:1215263/100‑1 (MQ=255) aaTGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGACAATAATATAAACCTAGCCGTGGGCGAAGTTGATCATGCGGATAATGc > 2:1993670/1‑98 (MQ=255) gCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTaa > 2:97101/1‑100 (MQ=255) gccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAAcc < 2:780556‑M1/97‑1 (MQ=255) gccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAAcc < 1:1224081‑M1/97‑1 (MQ=255) ccCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCa < 2:877551‑M1/98‑1 (MQ=255) atcatcatcAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCa > 2:360250/1‑100 (MQ=255) | GTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCA > NC_000913/3596116‑3596312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |