| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 561,696:1 | (G)6→7 | 100% | coding (2000/2604 nt) | sfmD → | putative outer membrane export usher protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 561,690 | 1 | . | G | 69.0% | 191.5 / 110.3 | 87 | coding (1994/2604 nt) | sfmD | putative outer membrane export usher protein |
| Reads supporting (aligned to +/- strand): ref base . (12/15); new base G (32/27); total (44/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.02e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
GGCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGAG > NC_000913/561593‑561783 | ggCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg < 2:18795/100‑1 (MQ=255)ggCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg > 1:964993/1‑100 (MQ=255) gCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg‑‑g > 2:1754198/1‑100 (MQ=255) gCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg‑‑g > 1:557872/1‑100 (MQ=255) gCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg‑‑g > 2:735251/1‑100 (MQ=255) gCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg > 2:2099576/1‑99 (MQ=255) ccACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg‑‑gg < 1:2049302/100‑1 (MQ=255) ccACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg‑‑gg < 1:436310/100‑1 (MQ=255) ccACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg‑‑gg < 1:739924/100‑1 (MQ=255) ccACAACCTGAGTTATCACGTAAGCCAGGGAGATAACTCGAAAAATGGGTACACGGGCAGCGCCACGGCAACCTGGCAGGCCGCTTACGGACCGCT‑‑gg‑‑g > 2:811347/1‑99 (MQ=255) cacaACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg‑‑ggg > 1:1752359/1‑100 (MQ=255) aCCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCAGCTTACGGTACGCT‑‑gg‑‑gggggcg > 1:1564387/1‑97 (MQ=255) ccTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg‑‑gggggcgg > 1:1006938/1‑96 (MQ=255) ccTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg‑‑gggggcgg > 1:1985635/1‑96 (MQ=255) ccTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCggg < 1:572081/100‑1 (MQ=255) cTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg‑‑gggggcggg < 2:246781/100‑6 (MQ=255) cTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg‑‑gggggcggg < 2:1530081/100‑6 (MQ=255) cTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑gg‑‑gggggcggg < 2:900/100‑6 (MQ=255) cTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGt < 2:1320041/100‑1 (MQ=255) cTGAGTTATCACGTAAGCCAGAGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGTAGGCGGCTTACGGTACACT‑‑gg‑‑tggggc > 2:913278/1‑95 (MQ=255) gAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGtat > 2:2507258/1‑100 (MQ=255) aGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGtata > 2:2622955/1‑100 (MQ=255) gTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGtata < 1:507027/100‑1 (MQ=255) gTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACCGCAGACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGtata < 2:1252017/100‑1 (MQ=255) tATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACt > 1:2348980/1‑100 (MQ=255) tATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACt > 1:2502260/1‑100 (MQ=255) tCACGTAAGCCAGGGTGATACCTCGAATAATTGGTACACGGGCAGCTCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTa < 1:871501/100‑1 (MQ=255) aCGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACg > 1:1941544/1‑100 (MQ=255) cGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGAAGGCCGCTTACGGTACGAT‑‑GG‑‑GGGGCGGGTATAACTACGAc > 1:319361/1‑100 (MQ=255) tAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGAcc > 2:1152134/1‑100 (MQ=255) tcaattgTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGa < 2:195713/94‑1 (MQ=255) gCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTCCGACcgcg > 2:2499698/1‑100 (MQ=255) ccAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACcgcg > 2:2146929/1‑99 (MQ=255) cAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGAt < 2:661837/100‑1 (MQ=255) cAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGAt > 2:1291977/1‑100 (MQ=255) aGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATc < 1:1201039/100‑1 (MQ=255) aGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGAGATc < 2:524031/100‑1 (MQ=255) gggTGATACCTCGAATGATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCa < 2:1972319/100‑1 (MQ=255) ggTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCaa > 1:1825781/1‑100 (MQ=255) ggTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCaa < 2:2480861/100‑1 (MQ=255) gttaTACCTTGAATATTGGGTACTCGGGCAGCGCCACTGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAAc < 1:652990/97‑1 (MQ=255) gTGATATCTCGAATAATGGGTACACGGGGAGCGCCACGGCAAACTGGCAGGCCGATTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAAc < 1:1280086/99‑1 (MQ=255) gTGATACCTCGAATAATGGGTACACGGGCTGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAAc < 2:1592035/100‑1 (MQ=255) gATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACAt > 2:94328/1‑100 (MQ=255) tctccTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATg < 1:2532133/97‑1 (MQ=255) aTACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATg < 2:1634950/100‑1 (MQ=255) aTACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATg < 1:1294015/100‑1 (MQ=255) aTACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATg < 2:2256336/100‑1 (MQ=255) aTACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGa < 1:205857/100‑1 (MQ=255) aCCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACg < 1:1628008/100‑1 (MQ=255) aCCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACg > 1:1545381/1‑100 (MQ=255) ccTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGaga > 2:2532103/1‑98 (MQ=255) ccTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACg > 2:1555325/1‑100 (MQ=255) ccTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACg > 1:888002/1‑100 (MQ=255) ccTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGt < 2:2596661/100‑1 (MQ=255) cTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGATG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACg > 1:2393390/1‑99 (MQ=255) tCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGtt > 1:817152/1‑100 (MQ=255) tCGAATAATGAGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGtt > 2:731183/1‑100 (MQ=255) gAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAAc < 2:1745329/100‑1 (MQ=255) gAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAAc > 2:1890839/1‑100 (MQ=255) taatGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTg < 2:1740036/100‑1 (MQ=255) aatGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTg > 1:1243652/1‑99 (MQ=255) atGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTgg > 1:2377362/1‑100 (MQ=255) tGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACTGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAg < 2:1689093/100‑1 (MQ=255) tGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCa > 1:522644/1‑100 (MQ=255) tGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCa > 1:1999544/1‑100 (MQ=255) tGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCa < 1:2240493/100‑1 (MQ=255) gggTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAg > 2:2127394/1‑100 (MQ=255) gggTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGc < 2:2502230/100‑1 (MQ=255) ggTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGc > 1:1023279/1‑100 (MQ=255) tACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTg < 1:657423/100‑1 (MQ=255) acacGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGt > 1:382046/1‑100 (MQ=255) cacGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTc > 2:621389/1‑100 (MQ=255) cacGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTc < 1:679746/100‑1 (MQ=255) cacGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GA‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCt > 2:1471677/1‑100 (MQ=255) cGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTg > 1:1501305/1‑100 (MQ=255) cGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTg > 2:1823232/1‑100 (MQ=255) cGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTAAGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTg > 2:498345/1‑100 (MQ=255) gggCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTgg < 1:1212448/100‑1 (MQ=255) cAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCgg < 1:1056797/100‑1 (MQ=255) aGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGgtg < 1:288403/100‑1 (MQ=255) cgcCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGgtgt > 2:1803511/1‑100 (MQ=255) gcCACGGCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGtgtg > 2:1021301/1‑100 (MQ=255) ccACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGt > 2:1276419/1‑100 (MQ=255) cGGCAAACTGTCTGGCCGCTTACGGTACGCT‑‑GGGTGGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTc < 1:505942/100‑1 (MQ=255) gCAAACTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCggg < 2:2399803/100‑1 (MQ=255) gCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGc < 2:557868/100‑1 (MQ=255) cTGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGAGTGGTCGGGCATGa > 2:2441520/1‑100 (MQ=255) tGGCAGGCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGAATGaa < 2:754337/100‑1 (MQ=255) cttccgatctcGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATg < 1:1209521/90‑1 (MQ=255) ggCCGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATgg > 1:1239318/1‑100 (MQ=255) gCCGCTTACGGTACGCTGGGG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATgg < 1:1842771/100‑1 (MQ=255) gCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCa < 1:2165622/100‑1 (MQ=255) ccGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCa < 2:1006928/100‑1 (MQ=255) ccGCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCa < 2:1409248/100‑1 (MQ=255) gCTTACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATa > 1:1577181/1‑100 (MQ=255) tACGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCACGATCAACATGACGGTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACg > 2:1184273/1‑100 (MQ=255) cGGTACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATgagatcggaag > 2:1209509/1‑90 (MQ=255) gTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAAAATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGag < 2:884950/100‑1 (MQ=255) tACGCTG‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGag < 2:61887/100‑1 (MQ=255) | GGCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑‑GG‑‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGAG > NC_000913/561593‑561783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |