| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,053,516:1 | (G)6→7 | 100% | coding (2663/2745 nt) | torS ← | hybrid sensory histidine kinase in two‑component regulatory system with TorR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,053,510 | 1 | . | G | 66.3% | 186.1 / 120.2 | 86 | coding (2669/2745 nt) | torS | hybrid sensory histidine kinase in two‑component regulatory system with TorR |
| Reads supporting (aligned to +/- strand): ref base . (17/12); new base G (30/27); total (47/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
GTTCTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATGCGC > NC_000913/1053411‑1053604 | gttCTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGACCGACAACACTGCGTGTAATTTCTTCGTGTGG‑aa > 1:1314982/1‑100 (MQ=255)gttCTTAACTGGCTGACATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑aa > 2:2315373/1‑100 (MQ=255) ttCTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑aa > 1:1778104/1‑99 (MQ=255) ttCTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑g < 2:1521521/100‑1 (MQ=255) cTTAACTGGCTGATATTGATTCAAATCGCGTTTATGTTTTTCTTATGCAACCATGCTTCCAGAGAGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑ggg < 1:671561/100‑1 (MQ=255) ttAACTGGCTGATATTGATTCACATCGCGTTCAGGTCCTTCTTATGCCACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑ggg‑g < 2:1787835/100‑1 (MQ=255) tAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑ggg‑g‑g > 1:741833/1‑100 (MQ=255) tAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑ggg‑g‑g > 2:886029/1‑100 (MQ=255) tAACTGGCTGATATCGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACCCTGCGTGTAATTTCTTCGTGTGG‑AA‑gcg‑g‑g < 2:1578748/100‑1 (MQ=255) aaCTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑ggg‑g‑g‑g < 2:1962687/100‑1 (MQ=255) aaCTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑ggg‑g‑g‑g > 2:1776868/1‑100 (MQ=255) aCTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑ggg‑g‑g‑gn < 2:900651/100‑2 (MQ=255) aCTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑Gc < 1:167799/100‑1 (MQ=255) cTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑ggg‑g‑g‑ggc < 2:741826/100‑3 (MQ=255) cTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑ggg‑g‑g‑ggc > 1:570570/1‑98 (MQ=255) cTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCa > 1:2576128/1‑100 (MQ=255) gCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑ggg‑g‑g‑ggcaga > 2:34841/1‑95 (MQ=255) gCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑ggg‑g‑g‑ggcaga < 2:2093179/100‑6 (MQ=255) cTGTTATTGATTCAAATCGCTTTTAGGTTTTTCTTATGTAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑ggg‑g‑g‑ggcaga < 1:1055395/99‑6 (MQ=255) cTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGAt > 1:799373/1‑100 (MQ=255) taatatTGAGTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTGCGTGTGG‑AAGGGG‑G‑G‑GCAGATa < 1:771930/98‑1 (MQ=255) gATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATaa > 1:2347970/1‑100 (MQ=255) tatTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAAt > 2:563908/1‑99 (MQ=255) tctGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCTTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGgc < 2:1416176/98‑1 (MQ=255) atTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGgc < 1:1373635/100‑1 (MQ=255) ttGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGgc < 1:1501252/100‑1 (MQ=255) tGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGgct > 2:1645196/1‑100 (MQ=255) tGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGgct > 2:450931/1‑100 (MQ=255) gATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGgctg < 2:1304043/100‑1 (MQ=255) gATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGgctg > 1:1664962/1‑100 (MQ=255) gATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGgcaga > 1:1416190/1‑97 (MQ=255) aTTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑CAGGGG‑G‑G‑GCAGATAATGgctgc < 2:1533612/100‑1 (MQ=255) aTTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGgctgc > 2:1574015/1‑100 (MQ=255) aTTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGgctgc < 1:2383241/100‑1 (MQ=255) aTTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGgctgct < 1:1256030/100‑1 (MQ=255) ttCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGgctggt > 2:666784/1‑98 (MQ=255) ttCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGgctgct < 2:1089444/100‑1 (MQ=255) ttCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGAGTAATTTCTTCAAGTGA‑AA‑GGGAG‑G‑GCAGAAAATGgctgct > 1:2387121/1‑100 (MQ=255) tCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGgctgctgc < 2:1294291/100‑1 (MQ=255) cAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGgctgctgc < 2:521252/100‑1 (MQ=255) cAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGgctgctgc > 2:1662039/1‑100 (MQ=255) cAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGgctgctgct > 1:2018008/1‑100 (MQ=255) aTCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTcc < 1:311773/100‑1 (MQ=255) aTCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTcc > 1:2510045/1‑100 (MQ=255) aTCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCa > 2:1476801/1‑100 (MQ=255) aTCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCa > 2:1476066/1‑100 (MQ=255) tCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAg < 2:1917666/100‑1 (MQ=255) gcgTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGt < 2:1271178/100‑1 (MQ=255) gTTCAGGACTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTtg > 1:1392283/1‑100 (MQ=255) ttCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTtgtg < 2:683080/100‑1 (MQ=255) aGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTgcg < 1:1873096/100‑1 (MQ=255) ggTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTgcgc < 1:1582144/99‑1 (MQ=255) ctttctcATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATa > 1:496704/1‑100 (MQ=255) ttcttATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgct > 1:1855640/1‑100 (MQ=255) tATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggc > 2:400801/1‑100 (MQ=255) tATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGGAG‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggc > 1:805648/1‑100 (MQ=255) tGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTTCGCATAgctggct > 1:1302592/1‑99 (MQ=255) tGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggctg > 2:2445011/1‑100 (MQ=255) gCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGctggctgg > 2:2026007/1‑100 (MQ=255) cAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCg > 1:1484987/1‑100 (MQ=255) cATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGata < 2:339052/100‑1 (MQ=255) cATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGata > 2:2619731/1‑100 (MQ=255) tGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATg > 1:2483349/1‑100 (MQ=255) cTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCa > 2:2510112/1‑100 (MQ=255) cTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCAt < 2:316551/100‑1 (MQ=255) cAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTcc > 2:2334136/1‑100 (MQ=255) gagCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCa > 1:2236496/1‑100 (MQ=255) gagCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAg > 1:756575/1‑100 (MQ=255) agCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAg < 1:2421041/100‑1 (MQ=255) ggCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGGTGGCTGGCGATATGCATTCCCAGACt > 2:479850/1‑100 (MQ=255) ggCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑GTG‑GCAGATAATGGCTGCTGCTCCAGTTGTGCTCATAGCTGGCTGGCGATATGCATTCCCa < 2:2387091/96‑1 (MQ=255) ggCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑GAGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACt > 2:1850010/1‑100 (MQ=255) ggCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTc > 2:469374/1‑100 (MQ=255) ggCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTc > 2:1892949/1‑100 (MQ=255) gCAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTc < 2:1778087/100‑1 (MQ=255) cAACACTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCg > 1:1726531/1‑100 (MQ=255) cAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGa < 1:922894/100‑1 (MQ=255) cacTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGc < 1:550034/100‑1 (MQ=255) acTGCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCa < 1:1776885/100‑1 (MQ=255) acTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCaa > 1:2355184/1‑100 (MQ=255) gCGTGTAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACt < 2:2479737/100‑1 (MQ=255) tgtAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCt > 1:1087177/1‑100 (MQ=255) tgtAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCt < 2:1308240/100‑1 (MQ=255) tgtAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCtt > 2:1717279/1‑100 (MQ=255) gtAATTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCtt > 1:1021655/1‑100 (MQ=255) aTTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCTAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCttttt < 1:1304035/100‑1 (MQ=255) aTTTCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCttttt > 2:2659441/1‑100 (MQ=255) tttCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTa < 2:2349900/100‑1 (MQ=255) tttCTTCGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTACTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTa > 2:1416406/1‑100 (MQ=255) ttcttcGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAg < 2:463254/100‑1 (MQ=255) ttcttcGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAg > 2:1679144/1‑100 (MQ=255) ttcttcGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAg < 2:2495698/100‑1 (MQ=255) tcttcGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGc < 1:419165/100‑1 (MQ=255) cttcGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTg < 1:1370568/100‑1 (MQ=255) ttcGTGTGG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCTATTTGTGTGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTg < 1:392294/100‑1 (MQ=255) gtgG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATgcg < 2:1154985/100‑1 (MQ=255) gtgG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATgcg > 1:1658926/1‑100 (MQ=255) gtgG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGCTgcgc > 2:1315288/1‑100 (MQ=255) tgG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATgcgc > 1:1651138/1‑100 (MQ=255) tgG‑AAGGGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATgcgc > 2:18002/1‑100 (MQ=255) | GTTCTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGG‑AA‑GGG‑G‑G‑GCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATGCGC > NC_000913/1053411‑1053604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |