| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,652,855:1 | (G)6→7 | 100% | coding (362/846 nt) | sseA → | 3‑mercaptopyruvate sulfurtransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,652,849 | 1 | . | G | 96.8% | 324.5 / 4.0 | 95 | coding (356/846 nt) | sseA | 3‑mercaptopyruvate sulfurtransferase |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base G (51/41); total (52/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.98e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
AGGATAAGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCT‑‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGTTTAAT > NC_000913/2652750‑2652943 | aGGATAAGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCt > 1:124542/1‑100 (MQ=255)aGGATAAGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATAGTGGATACTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCt > 1:750489/1‑100 (MQ=255) ggATAAGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCt < 1:380666/99‑1 (MQ=255) tAAGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCT‑‑gggg < 2:2327498/100‑1 (MQ=255) gCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCT‑‑gggg‑ggg > 1:774986/1‑99 (MQ=255) gCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATCCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCT‑‑gggg‑ggg > 2:1861564/1‑99 (MQ=255) cACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCT‑‑gggg‑gggt > 1:1043623/1‑98 (MQ=255) aCCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCT‑‑gggg‑gggtg > 1:1287616/1‑97 (MQ=255) cTGATTGTCTATGACGAAGGTAATCTTGTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCT‑‑gggg‑gggttga < 2:753091/100‑6 (MQ=255) gATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACt > 2:274333/1‑100 (MQ=255) aTTGTCTATGACTAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGAGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACtt < 1:583155/100‑1 (MQ=255) tGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGc < 2:1925422/100‑1 (MQ=255) tGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGc < 2:1560457/100‑1 (MQ=255) tGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATAGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑GGGACTTGc > 2:912118/1‑100 (MQ=255) gtttATGACGACTGTAATCGTTTCTCTGCCGTATGAGCCTGGTGGATGCTGCGCATCTTTGGTGTAGAGATAGTGTCGATTATG‑GGGG‑GG‑TGGAc < 2:1668698/92‑1 (MQ=255) cTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAgg > 2:1607692/1‑100 (MQ=255) cTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAgg > 2:1496686/1‑100 (MQ=255) cTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAgg > 2:1798016/1‑100 (MQ=255) tATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGc > 2:2305993/1‑100 (MQ=255) tATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTATAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGc > 1:224649/1‑100 (MQ=255) tGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTg > 1:80726/1‑100 (MQ=255) tGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTg > 1:1866640/1‑100 (MQ=255) tGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTg < 2:521464/100‑1 (MQ=255) aCGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGc < 2:124541/100‑1 (MQ=255) aCGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGc < 2:236889/100‑1 (MQ=255) aCGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGc > 1:495487/1‑100 (MQ=255) gAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAg < 1:2157088/100‑1 (MQ=255) ggTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAgcgc < 1:578831/100‑1 (MQ=255) ggTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAgcgc > 1:23540/1‑100 (MQ=255) aaTCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCgat > 1:1039421/1‑100 (MQ=255) aaTCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCgat > 1:2171148/1‑100 (MQ=255) aTCTTTTCTCAGCCCCACGAGCATGGTGGATGTTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCgatg > 1:1441289/1‑100 (MQ=255) cTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCgatgat > 2:1009232/1‑100 (MQ=255) ttttCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATc > 1:1807990/1‑100 (MQ=255) ttttCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATc < 2:1829166/100‑1 (MQ=255) ttttCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATc < 1:351161/100‑1 (MQ=255) ttttCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATc < 1:2621773/100‑1 (MQ=255) ttttCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTGTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATc < 2:1942504/100‑1 (MQ=255) tttCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTTCAGGCTGGCAGCGCGATGATct < 2:1542417/100‑1 (MQ=255) ctctGCCCCACGAGCATGGTGGATGCTGCGCACTTTTGGTGTAGAGAAAGTGTCGAGTCTG‑GGGG‑GG‑GGGACTGGCAGGGTGGCAGCGCTATGAGctgc > 2:651539/1‑99 (MQ=255) ctcAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGAtcttct > 2:501758/1‑100 (MQ=255) ctcAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATctgct > 1:2281012/1‑100 (MQ=255) tcATCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATctgctg < 1:2355310/100‑1 (MQ=255) tcAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATctgctg < 2:1054476/100‑1 (MQ=255) cAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGt < 1:268366/100‑1 (MQ=255) cAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGt > 2:2417272/1‑100 (MQ=255) aGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGtt > 1:1729323/1‑100 (MQ=255) gCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTa < 1:1586084/100‑1 (MQ=255) gCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTa < 1:1534820/100‑1 (MQ=255) gCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTa < 1:2306021/100‑1 (MQ=255) ccccACGAGCATGGTGGATGCTGCGCACCTGTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTa < 1:449013/99‑1 (MQ=255) cccACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGCAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTaga > 2:2541322/1‑100 (MQ=255) aCGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTagaaga < 1:912127/100‑1 (MQ=255) gCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGt < 1:2209317/100‑1 (MQ=255) aTGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGc < 2:495483/100‑1 (MQ=255) ggtggATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAg < 2:2027789/100‑1 (MQ=255) ggtggATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAg < 1:1913299/100‑1 (MQ=255) ggtggATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAg > 1:2073059/1‑100 (MQ=255) ggtggATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAg < 1:373254/100‑1 (MQ=255) ggtggATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGAAGAACTGCTGTTAAAAGAAGGTGCAg > 1:1270210/1‑100 (MQ=255) gtggATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGt < 2:2386212/100‑1 (MQ=255) gtggATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGt < 1:865824/100‑1 (MQ=255) tggATGGTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTa < 2:2109037/100‑1 (MQ=255) ggATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACATGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTag > 2:2412550/1‑100 (MQ=255) aTGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTagag > 2:1072021/1‑100 (MQ=255) aTGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTagag < 1:2487659/100‑1 (MQ=255) ctgcGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTg > 1:1692087/1‑100 (MQ=255) ctgcGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTg > 1:1649047/1‑100 (MQ=255) tgcGCACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGc > 1:824308/1‑100 (MQ=255) gcgcACCTTTGGTGTAGAGAAAGTGTCGCTTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGGTGTTCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGcc > 2:1536027/1‑100 (MQ=255) gcgcACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGcc > 1:1496278/1‑100 (MQ=255) gcgcACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGcc > 2:1290744/1‑100 (MQ=255) cgcACCTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCg < 2:1043613/100‑1 (MQ=255) cgcACCTTTGGTGTAGAGAAAGTGTCGATTCT‑‑GGGGAGG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCg < 1:2526547/100‑1 (MQ=255) gcACCTTTGGTGTAGAGAAAGTGTCGATTCTGGGGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCg < 1:280132/100‑1 (MQ=255) gcACCTTTGGTGTAGAGAAAGTGTCGATTCT‑‑GGGG‑GGCTGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCgg > 2:1416184/1‑100 (MQ=255) ccTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGAAGAGCTGCCGGAAg < 2:153191/100‑1 (MQ=255) ccTTTGGTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAAAAGGTGCAGTAGAGCTGCCGGAAg > 1:1015435/1‑100 (MQ=255) ccTTTGGTATAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAg > 2:2108527/1‑100 (MQ=255) cTTTGGTGTAGAGAAAGTGTCGATTCT‑‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAgg < 2:1626602/99‑1 (MQ=255) ngtgtAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGagag > 2:1520015/2‑100 (MQ=255) ggTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGagag > 1:1586659/1‑100 (MQ=255) ggTGTAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGagag > 1:435694/1‑100 (MQ=255) gtAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGttt > 1:2220509/1‑100 (MQ=255) tAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTa < 2:1807973/100‑1 (MQ=255) tAGAGAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTa > 1:1264037/1‑100 (MQ=255) agagAAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTaa > 1:1185607/1‑100 (MQ=255) gagaAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAAc < 1:2508603/100‑1 (MQ=255) gaAAGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAAcga > 1:2521640/1‑99 (MQ=255) aaaGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAAcgcc > 1:1843996/1‑100 (MQ=255) aGTGTCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGGAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGGTTAAcgccgc > 2:2525762/1‑100 (MQ=255) gtgtCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCGGCCGGAAGGAGAGTTTAACGCcgcg < 1:1290757/100‑1 (MQ=255) gtCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGtt > 1:2601136/1‑100 (MQ=255) gtCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGtt < 2:457041/100‑1 (MQ=255) gtCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGACGGAAGGAGAGTTTAACGCCGCGtt > 1:1362757/1‑100 (MQ=255) tCGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGttt > 1:721041/1‑100 (MQ=255) cGATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGTTTa > 1:2235517/1‑100 (MQ=255) gATTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCTCGATGATCTGCTGTTAGAAAAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGTTTaa > 1:36248/1‑100 (MQ=255) aTTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGTTTAAt < 1:1861581/100‑1 (MQ=255) aTTCTG‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGTTTAAt < 1:1649369/100‑1 (MQ=255) | AGGATAAGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCT‑‑GGGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGTTTAAT > NC_000913/2652750‑2652943 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |