| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,809,774:1 | (T)7→8 | 100% | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,809,767 | 1 | . | T | 73.8% | 282.4 / 102.3 | 107 | coding (151/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base . (14/14); new base T (32/47); total (46/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 123 total aligned reads displayed.
GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGA > NC_000913/2809668‑2809860 | gATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t > 1:2361949/1‑100 (MQ=255) aTGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tt > 2:2638678/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑t > 1:993222/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑t > 2:1849808/1‑100 (MQ=255) aaaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑tt < 2:2538876/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCTTTTGTTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttt < 1:15146/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttt < 2:1499618/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttt > 2:200650/1‑100 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttttc > 2:665156/1‑98 (MQ=255) aCAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGCCCCGTCTGGAATTCTCTCCTCTCAAAAGCG‑‑tttt‑ttttct < 2:1931905/100‑4 (MQ=255) aCAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttttct < 1:1500378/100‑4 (MQ=255) cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTcc < 2:2150886/100‑1 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttttct < 2:469931/98‑4 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCt > 1:2335142/1‑100 (MQ=255) ttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGc > 2:612751/1‑100 (MQ=255) aCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGcatc > 2:301156/1‑100 (MQ=255) cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGcatca < 2:1000265/100‑1 (MQ=255) cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGcatca < 1:1849825/100‑1 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGcatcat < 1:2423652/100‑1 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGcatcat > 1:1039235/1‑100 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCAtt > 2:2511000/1‑100 (MQ=255) aTTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCAtt < 1:28798/100‑1 (MQ=255) ttGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCAttt > 2:604097/1‑100 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTa < 1:2096672/100‑1 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TTT‑TTTCTCCTGCATCATTTATg < 2:992759/100‑1 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCa < 1:612755/100‑1 (MQ=255) ttaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATTCa > 2:1042720/1‑99 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTTGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATAAATGATGCAgg < 1:141389/100‑1 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTTGTTTCTCCTGCATCATTTATGCAgg > 1:491792/1‑100 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGgc < 1:2511030/100‑1 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCATCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAgg > 1:2036469/1‑100 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGgc > 2:236131/1‑100 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGgcg > 1:2243360/1‑100 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATAAATGATGCAggaga < 2:2597524/100‑4 (MQ=255) ttATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATAAATGATGCAggaga < 1:424654/100‑4 (MQ=255) ttATATTCCGGCGCCTTTTCCGTTCGGTCTCAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATTCAGgcgc < 2:2133049/100‑1 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTTTTTTTCATCATTTATGCAGgc > 2:1874078/1‑97 (MQ=255) atatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATAAATGATGCAggagaaa < 2:2239487/100‑6 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGc < 1:948181/100‑1 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGcc > 1:926814/1‑100 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 2:179895/100‑1 (MQ=255) tCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAg > 2:917287/1‑100 (MQ=255) ccGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGt < 1:301158/100‑1 (MQ=255) gaccTTTGAGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAGGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGt < 2:1360676/98‑1 (MQ=255) gCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTACATCATTTATGCATGCACGAACCAGTTAGt > 1:2544725/1‑99 (MQ=255) gCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcg < 1:30879/100‑1 (MQ=255) cGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcg > 2:1905266/1‑100 (MQ=255) cGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcg > 1:2590597/1‑100 (MQ=255) cGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 1:823441/100‑1 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc > 1:1780309/1‑100 (MQ=255) ttCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgcg < 1:1782915/100‑1 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt > 1:164279/1‑100 (MQ=255) tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAAGCGCGAACCAGTTCGTCATTACCGCGATGCt > 1:1064363/1‑100 (MQ=255) tctaaTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 2:838483/97‑1 (MQ=255) cTGAATGCGCCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg < 2:1848408/100‑1 (MQ=255) tcaaTGCTACCCGTCTGGCATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 2:2096640/98‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 2:2361919/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 2:1317230/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 1:246857/100‑1 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg > 1:1707423/1‑100 (MQ=255) aaTGCGACCCGTCTGGGATTCTCTCCTCTTGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCa < 2:223526/100‑1 (MQ=255) aaTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTggaga > 1:838492/1‑97 (MQ=255) aTGCGACCCGTCTGGGATTCTTTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAg < 1:2542075/100‑1 (MQ=255) aTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAg > 2:1270654/1‑100 (MQ=255) aTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAg > 1:162724/1‑100 (MQ=255) gACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCTGGCGCGAGCCTGTTCGTCATTACCGCGATGCTGGCAGCCgtg < 1:1792437/100‑3 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:2544695/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:2110034/100‑1 (MQ=255) cccGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGa > 1:1149317/1‑100 (MQ=255) ccttttGGGGTTTTCTCCTCTCCGAGGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGa < 2:339384/94‑1 (MQ=255) gTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagta > 1:2585600/1‑100 (MQ=255) tGGGATTCTCTCCTCTCGAAATCGT‑TTTT‑TTTCTCCGGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGtt < 1:1866754/100‑1 (MQ=255) gggATTCTCTCCTCTCGAAAGCG‑‑‑TAT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgt > 2:607713/1‑100 (MQ=255) ggATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtg < 2:2612031/100‑1 (MQ=255) ggATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgt > 2:977475/1‑100 (MQ=255) gATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGTCGCGAGCCAGTTCGTCATTACCGCGATGCTAGCAGCAGGGAATAGTTtgt > 1:388908/1‑100 (MQ=255) gATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:1585209/100‑1 (MQ=255) aTTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:1087628/100‑1 (MQ=255) aTTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:1019879/100‑1 (MQ=255) aTTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 1:1502246/100‑1 (MQ=255) ttttcttctttcTAAAGTG‑‑TTTT‑TTTTTTGTGTATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:969768/96‑1 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:2492417/99‑1 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:1879632/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg > 1:1013050/1‑100 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCATGAATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg > 2:1743150/1‑100 (MQ=255) ctctcttctcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 2:2018494/98‑1 (MQ=255) ctctcctctcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAt > 1:2165057/1‑100 (MQ=255) ctctcctctcGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAtt > 1:2313405/1‑100 (MQ=255) ctcctctcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtg > 2:347640/1‑100 (MQ=255) tcctctcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 2:520716/100‑1 (MQ=255) cctctcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgct > 1:1117662/1‑100 (MQ=255) cctctcGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg > 1:2393184/1‑100 (MQ=255) ctctgtaaaGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgct < 2:2149155/93‑1 (MQ=255) ctctcGAATGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgct < 2:1149307/99‑1 (MQ=255) ctctcGAAAGCGT‑TTTT‑TTTCTCCTGTATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 1:1042730/100‑1 (MQ=255) ctctcGAAAGCGT‑TTTT‑TTTCTCCTGCATTATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 1:200652/100‑1 (MQ=255) ctctcGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCTAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc < 1:164540/100‑1 (MQ=255) ctcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCa > 2:2193474/1‑100 (MQ=255) cGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACt < 2:380742/100‑1 (MQ=255) aaaGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACt < 2:2331185/98‑1 (MQ=255) | GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGA > NC_000913/2809668‑2809860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |