| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,809,774 | (T)7→8 | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,809,767 | 1 | . | T | 96.0% | 343.8 / 6.6 | 102 | coding (151/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base . (0/4); new base T (45/52); total (46/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 118 total aligned reads displayed.
ATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAC > NC_000913/2809670‑2809861 | aTGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑tt < 1:2665300/100‑1 (MQ=255) tGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGTGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttt > 2:1228914/1‑100 (MQ=255) tGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttt > 1:1004788/1‑100 (MQ=255) tGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttt > 1:2606900/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttt > 1:1482759/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttt > 1:179005/1‑100 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttttt < 2:1125388/100‑1 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttttttc < 1:922987/100‑3 (MQ=255) cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GC‑TTTTTTt‑ctc > 2:1820977/1‑100 (MQ=255) cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttttttctc < 2:2260930/100‑5 (MQ=255) cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttttttctc < 2:2107128/100‑5 (MQ=255) cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑TTTTTTT‑CTcc < 2:442339/100‑1 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttttttctcc < 2:2454658/100‑6 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttttttctcc < 2:1826467/100‑6 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttttttctcc < 2:433437/100‑6 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCt < 1:247260/100‑1 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTg < 2:2702256/100‑1 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTg > 1:334815/1‑100 (MQ=255) ttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCAGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGc < 1:1714655/100‑1 (MQ=255) tACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGca < 1:2048974/100‑1 (MQ=255) tACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGca < 1:2350400/100‑1 (MQ=255) aCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGcat > 1:2517267/1‑100 (MQ=255) ccGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGcatc > 2:1275787/1‑100 (MQ=255) ccGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGcatc > 1:1697829/1‑100 (MQ=255) aTTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑TTTTTTT‑CTCCTGCATCAttt < 1:2547693/100‑1 (MQ=255) ttGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCAttt < 2:53815/100‑1 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTa < 1:171108/100‑1 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTAt > 1:432300/1‑100 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTAt > 1:1180689/1‑100 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATg > 2:1763705/1‑100 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGc < 2:1004781/100‑1 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGc > 2:1467590/1‑100 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGc > 2:898023/1‑100 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCa < 1:104480/100‑1 (MQ=255) ttaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAg > 2:1236898/1‑100 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAgg > 2:163174/1‑100 (MQ=255) ctgTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAgg < 1:2219952/98‑1 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGgc > 1:1942116/1‑100 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGgc > 1:380921/1‑100 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAggag > 2:2219934/1‑98 (MQ=255) tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGa > 2:816153/1‑99 (MQ=255) tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAg < 1:1552304/100‑1 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGc > 1:1342055/1‑100 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑TTTTTTTATCATTTATGCAGGCTCGAg > 2:1927173/1‑98 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGcc < 1:2046581/100‑1 (MQ=255) tCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCa < 2:1292758/100‑1 (MQ=255) ccGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAg > 2:331190/1‑100 (MQ=255) tGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGTGCGAGCCAGTTCg < 2:646286/100‑1 (MQ=255) tGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 1:737852/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 1:2166322/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 1:1179546/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 1:964343/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 2:828423/1‑100 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAATTCGTCa < 1:2446445/100‑1 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt > 1:1318228/1‑100 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt > 2:1526703/1‑100 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt > 1:2398680/1‑100 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt > 2:1184348/1‑100 (MQ=255) tttGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt > 1:1130289/1‑100 (MQ=255) tttGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTATCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt > 1:1129684/1‑100 (MQ=255) ttGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTa > 1:2577492/1‑100 (MQ=255) tGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTAc > 1:774166/1‑100 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 1:1228958/100‑1 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 1:1228921/100‑1 (MQ=255) ggTCTGAGTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCAGTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATg < 2:1482748/100‑1 (MQ=255) ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGAt > 1:2202026/1‑100 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATg < 2:2202008/100‑1 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGc > 2:1218205/1‑100 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAATTCGTCATTACCGCGATGc < 2:2606881/100‑1 (MQ=255) tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt < 2:494200/100‑1 (MQ=255) tGAATGCGGCCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 2:383346/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg > 1:2767498/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 2:1352156/1‑100 (MQ=255) gCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGcc < 1:1692100/100‑1 (MQ=255) cccGGCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTGTGCAGGCGCGAGCCAGTTCGTCATTGCCGCGATGCTGGCAGCCggg < 1:683464/99‑1 (MQ=255) ccGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGag < 1:2578293/100‑1 (MQ=255) cGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagt > 1:1972938/1‑100 (MQ=255) tCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtag < 1:876216/100‑1 (MQ=255) cTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCTGGagtagt < 2:1203517/100‑1 (MQ=255) cTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtagt > 1:1194022/1‑100 (MQ=255) tGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGtt > 2:127795/1‑100 (MQ=255) tGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGtt < 1:1275794/100‑1 (MQ=255) gATTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgt < 1:898029/100‑1 (MQ=255) aTTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg > 2:1468885/1‑100 (MQ=255) aTTCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 1:997814/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtg < 2:2130921/97‑1 (MQ=255) ttCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg > 1:1674250/1‑100 (MQ=255) ttCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 2:774161/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 2:1459565/100‑1 (MQ=255) tctctcCTCTCGAACGC‑G‑‑TTTTTTTCCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:816159/99‑1 (MQ=255) ctctcctctcGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAt < 1:360788/100‑1 (MQ=255) tctcctctcGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAtt < 2:2611196/100‑1 (MQ=255) tcctctcGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 2:2398661/100‑1 (MQ=255) ctctcGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 1:331193/100‑1 (MQ=255) tctcGAAAGCTT‑‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 2:1130282/99‑1 (MQ=255) tctcGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc > 1:2602678/1‑100 (MQ=255) tcgcGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 2:1129677/96‑1 (MQ=255) ctcGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCa > 2:246312/1‑100 (MQ=255) tcGAAAGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 1:1923749/100‑1 (MQ=255) aaGC‑GT‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAc < 2:179002/100‑1 (MQ=255) | ATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑TTTTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAC > NC_000913/2809670‑2809861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |