| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,866,592 | +C | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 97.1% | 374.9 / 3.9 | 104 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base C (57/44); total (59/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
ATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑CCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866490‑2866682 | aTCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑c > 2:2706275/1‑100 (MQ=255)aTCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑c < 2:515971/100‑1 (MQ=255) gACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑ccc‑cc < 1:1041778/100‑2 (MQ=255) gACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑ccc‑cc > 2:484836/1‑99 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑ccc‑cctgcg > 1:1225745/1‑95 (MQ=255) ttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGtt < 1:1738435/100‑1 (MQ=255) aTTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTg > 1:620696/1‑100 (MQ=255) ttGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGc < 1:1266067/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAg < 1:348671/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAg > 2:1031574/1‑100 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAg > 2:1279398/1‑100 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAg > 1:1998611/1‑100 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGTACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAgg < 1:1942201/100‑1 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGAt < 2:1313893/100‑1 (MQ=255) acaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGAtt > 1:334335/1‑100 (MQ=255) acaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGAtt > 1:941460/1‑100 (MQ=255) acaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGAtt > 1:127210/1‑100 (MQ=255) caGAAAAGNCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCNGGAttt > 1:2521215/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGAttt > 1:1409305/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGAttt > 2:2255135/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGAttt > 1:1054107/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTc > 2:830959/1‑99 (MQ=255) aaaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTcgc < 1:606610/100‑1 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCgcgc < 2:2519279/100‑1 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCaa < 1:1127235/100‑1 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAAc > 1:1262634/1‑100 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTATGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCaaa > 1:2721143/1‑99 (MQ=255) cAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACg < 2:1998594/100‑1 (MQ=255) cAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACg > 2:2261554/1‑100 (MQ=255) cAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACg > 2:1176618/1‑100 (MQ=255) aGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACgg < 1:828734/100‑1 (MQ=255) aGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACgg > 1:2656402/1‑100 (MQ=255) gCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGgc < 1:2336835/100‑1 (MQ=255) cTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGgcgc > 1:606827/1‑100 (MQ=255) tCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCa < 1:511680/100‑1 (MQ=255) cGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCa > 2:1327266/1‑99 (MQ=255) cGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAg < 1:704905/100‑1 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCa > 2:2197146/1‑98 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg < 2:295406/100‑1 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg > 2:1077804/1‑100 (MQ=255) cTTGAGACTGGCCTTTCTGCCAGATGCTTACTTCCTCGCGGAACAGCGCTTCGATACTCACA‑CCC‑CCGCGTTCGCACGATCTCGCGCACACgccccacgc > 2:2630542/1‑92 (MQ=255) gcgaCTGGCCTTTCTGACAGATGCTTAGTTACTCGCGGAACAGCGCTGCGATATTGA‑G‑CCCACTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcc < 2:231063/96‑1 (MQ=255) gagaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt > 2:1355155/1‑100 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc < 1:1279405/100‑1 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa > 2:2747697/1‑100 (MQ=255) cTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc > 1:1344413/1‑100 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 2:2002656/1‑100 (MQ=255) ccTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGa > 2:1986922/1‑100 (MQ=255) ccTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGa > 2:1847175/1‑100 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa > 2:1008366/1‑100 (MQ=255) cTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATc < 2:1675119/98‑1 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 2:2606900/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 1:2584309/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 2:510779/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc < 2:2568125/100‑1 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 2:1372315/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATCCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc < 1:305314/100‑1 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 2:1752701/100‑1 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 2:805305/100‑1 (MQ=255) ttccgatctacttactCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa < 2:560920/92‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa > 2:711481/1‑100 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa < 1:484840/100‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa > 2:1457787/1‑100 (MQ=255) aGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGaa < 2:1840994/100‑1 (MQ=255) aGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGaa > 1:1676618/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 2:2295746/100‑1 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 2:1352721/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 2:199849/100‑1 (MQ=255) tGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAacac > 2:149133/1‑100 (MQ=255) gCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACg < 2:1103025/100‑1 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt < 1:2706294/100‑1 (MQ=255) ttacttacTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGtt < 2:2562453/100‑1 (MQ=255) tacttactCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTc < 1:2002673/100‑1 (MQ=255) acttactCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGaagatcggaa > 1:560924/1‑92 (MQ=255) cttactCGCGGAACAGCGCTTCGATATTCA‑G‑CCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACg > 2:660355/1‑100 (MQ=255) tactCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg > 1:170641/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCATGGGt > 2:700186/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 2:1145636/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCA‑GCCCC‑CTGTGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:2685165/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAATACGTTCACGGGTg > 2:567469/1‑99 (MQ=255) cgcgGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:1221501/1‑100 (MQ=255) ctcttccgatcTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 1:566071/90‑1 (MQ=255) cgGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 1:410880/100‑1 (MQ=255) ggAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc < 1:2240562/100‑1 (MQ=255) ggAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc > 1:2075837/1‑100 (MQ=255) cAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAt > 2:1075823/1‑100 (MQ=255) aGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCATGGGTGAGGCCAAtt < 1:700191/100‑1 (MQ=255) gcgcTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt < 2:1087137/100‑1 (MQ=255) gcgcTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt > 2:2009166/1‑100 (MQ=255) cgcTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTc > 1:2415190/1‑100 (MQ=255) cgcTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTc < 1:2179223/100‑1 (MQ=255) gcTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTcn < 2:1253169/100‑2 (MQ=255) cTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 2:1124405/1‑100 (MQ=255) ttCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACg < 2:855034/100‑1 (MQ=255) cGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc > 2:2137534/1‑100 (MQ=255) gATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc < 1:1077811/100‑1 (MQ=255) tatTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa < 1:1221508/100‑1 (MQ=255) tatTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa < 1:1143270/100‑1 (MQ=255) ttCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 1:808179/1‑100 (MQ=255) ttCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 1:1750069/1‑100 (MQ=255) | ATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑CCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866490‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |