| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,122,191 | (T)5→4 | coding (97/531 nt) | hslV ← | peptidase component of the HslUV protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,122,187 | 0 | T | . | 98.2% | 490.4 / 1.1 | 112 | coding (101/531 nt) | hslV | peptidase component of the HslUV protease |
| Reads supporting (aligned to +/- strand): ref base T (0/2); new base . (48/62); total (48/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01 | |||||||||||
Only 100 of 126 total aligned reads displayed.
ATTTCCAGTTTACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTT > NC_000913/4122088‑4122282 | aTTTCCAGTTTACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGTGGACCt > 2:2045132/1‑100 (MQ=255)aTTTCCAGTTTACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCt > 2:735075/1‑100 (MQ=255)aTTTCCAGTTTACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCt > 2:1796314/1‑100 (MQ=255)aTTTCCAGTTTACGTTCAAACAGTTCGAACACCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCt < 1:1095236/100‑1 (MQ=255) ttCCAGTTTACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCttt < 2:924230/100‑1 (MQ=255) ttCCAGTTTACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCttt > 2:2356484/1‑100 (MQ=255) tCCAGTTTACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCtttt < 2:87774/100‑1 (MQ=255) tCCAGTTTACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCtttt > 1:2777872/1‑100 (MQ=255) ccAGTTTACGTTCAAACAGTTCGAACAGCGTAAATGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCttttc < 2:1599223/100‑2 (MQ=255) cAGTTTACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCttttca > 1:843189/1‑98 (MQ=255) cAGTTTACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCttttca < 1:1753985/100‑3 (MQ=255) aGTTTACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCttttcac < 2:358523/100‑4 (MQ=255) ttACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGtt < 2:107507/100‑1 (MQ=255) ttACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGtt > 1:1650797/1‑100 (MQ=255) cgctgTTCGAACTGTTTGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGtt > 2:2783825/5‑100 (MQ=255) tACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTg > 1:1062973/1‑100 (MQ=255) tACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTg < 2:1784881/100‑1 (MQ=255) gctgTTCGAACTGTTTGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTg > 1:2787965/4‑100 (MQ=255) aCGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGc < 1:686659/100‑1 (MQ=255) aCGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCAATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGc > 2:1373720/1‑100 (MQ=255) cGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGcc > 2:2240735/1‑100 (MQ=255) cGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGcc < 1:1861080/100‑1 (MQ=255) cGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGcc < 2:347289/100‑1 (MQ=255) gTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCTGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCt < 1:2557760/100‑1 (MQ=255) gTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCt < 1:1116333/100‑1 (MQ=255) ttCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCtt > 2:2996888/1‑100 (MQ=255) tCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCttt < 1:24569/100‑1 (MQ=255) cAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTc > 2:1950146/1‑100 (MQ=255) aaaCAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCa > 1:2538659/1‑100 (MQ=255) cAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTa < 1:2697302/100‑1 (MQ=255) gTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACg > 1:1156074/1‑100 (MQ=255) ttCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACgg < 2:719544/100‑1 (MQ=255) tCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGt < 2:906539/100‑1 (MQ=255) cGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTa > 2:585469/1‑100 (MQ=255) gAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTAt > 2:1085292/1‑100 (MQ=255) cAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGc < 1:200864/100‑1 (MQ=255) cAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGc > 2:684746/1‑100 (MQ=255) aGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGcc > 1:176702/1‑100 (MQ=255) aGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGcc < 1:305001/100‑1 (MQ=255) gCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGccc > 2:629751/1‑100 (MQ=255) cGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCTTTTTCACGTTGCCTTTCATTACGGTATTGccc < 1:2754460/100‑1 (MQ=255) naaGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGt > 2:1878738/2‑100 (MQ=255) aaGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTg < 2:2306025/100‑1 (MQ=255) aaGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTg < 2:2291450/100‑1 (MQ=255) aGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTgg > 2:209409/1‑100 (MQ=255) aGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTgg < 1:265931/100‑1 (MQ=255) aGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTgg < 1:1608627/100‑1 (MQ=255) aGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTgg > 2:1922730/1‑100 (MQ=255) gCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGc < 2:1983955/100‑1 (MQ=255) cATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGcn < 2:1488001/100‑2 (MQ=255) aTCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCt < 2:439919/100‑1 (MQ=255) gCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGAcc < 1:585476/100‑1 (MQ=255) gCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGAcc > 2:1575485/1‑100 (MQ=255) cAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCa < 1:361172/100‑1 (MQ=255) ccgcccgcAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCAcc < 1:665516/100‑1 (MQ=255) cgcccgcAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCa > 1:2567489/1‑100 (MQ=255) gcccgcAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAg < 1:209412/100‑1 (MQ=255) cccgcAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGc < 1:1512280/100‑1 (MQ=255) cgcAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTGTCACGTTGCCTTTCATTACGGGATTGCCCAACGTGGCCTGACCATCACCAGCGa > 2:2418656/1‑100 (MQ=255) gcAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGAt > 1:1269328/1‑100 (MQ=255) cAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATg < 1:735082/100‑1 (MQ=255) cAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATg < 2:1496004/100‑1 (MQ=255) aaaGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGa < 1:397425/100‑1 (MQ=255) aaGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGAc < 1:2216998/100‑1 (MQ=255) aGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGAcc < 2:1650783/100‑1 (MQ=255) gCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACca < 2:2394990/100‑1 (MQ=255) ccGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACcaca < 2:2012661/100‑1 (MQ=255) ccGCGATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACcaca < 2:1282715/100‑1 (MQ=255) cgcgATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACAt < 1:677901/100‑1 (MQ=255) gcgATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATg < 1:2406141/100‑1 (MQ=255) cgATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATgg > 2:1752386/1‑100 (MQ=255) gATGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGc < 1:2688980/100‑1 (MQ=255) aTGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGGGATGACCACATGGcc < 2:478467/100‑1 (MQ=255) taaCTTTGTCGTGGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGc < 2:324208/96‑1 (MQ=255) tGACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCg < 1:2356505/100‑1 (MQ=255) gACTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGt > 2:2664981/1‑100 (MQ=255) cTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTa > 2:1484173/1‑100 (MQ=255) cTTTGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTa > 2:339601/1‑100 (MQ=255) tGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACgg < 2:1244335/100‑1 (MQ=255) tGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACgg < 1:203183/100‑1 (MQ=255) tGTCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACgg > 1:1710916/1‑100 (MQ=255) tCGTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCg < 1:1340118/100‑1 (MQ=255) gTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTa > 1:1248247/1‑100 (MQ=255) gTTGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTa > 2:362183/1‑100 (MQ=255) ttGTACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTAc < 1:2658921/100‑1 (MQ=255) tACAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCt < 1:945464/100‑1 (MQ=255) cAGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTa > 1:2416642/1‑100 (MQ=255) aGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTAc < 2:1813823/100‑1 (MQ=255) aGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTAc < 1:2240755/100‑1 (MQ=255) aGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTAc < 1:1752401/100‑1 (MQ=255) aGACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTAc < 1:1479757/100‑1 (MQ=255) naCGGCGGACC‑ATTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGAGATGACCACATGGCCGTTACGGCGTACGCTTACt > 2:1601223/2‑100 (MQ=255) gACGGCGGACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACt < 1:287979/100‑1 (MQ=255) cggcggACCTTTTTCACCTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACAACATGGCCGTTACGGCGTACGCTTa < 2:2553675/97‑1 (MQ=255) gcggACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAg < 1:2344555/100‑1 (MQ=255) cggACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGt > 2:2923698/1‑100 (MQ=255) cggACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGt < 1:909199/100‑1 (MQ=255) cggACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGt > 1:1255747/1‑100 (MQ=255) ggACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACtatact > 2:2032161/1‑97 (MQ=255) ggACC‑TTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGtt > 1:2336325/1‑100 (MQ=255) | ATTTCCAGTTTACGTTCAAACAGTTCGAACAGCGTAAAAGCATCCGCAGTACCGCCCGCAAAGCCCGCGATGACTTTGTCGTTGTACAGACGGCGGACCTTTTTCACGTTGCCTTTCATTACGGTATTGCCCAACGTGGCCTGACCATCACCAGCGATGACCACATGGCCGTTACGGCGTACGCTTACTATAGTT > NC_000913/4122088‑4122282 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |