BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3277819 =	NA (NA)	6 (0.050)	4/162	NT	NA	noncoding (1/29 nt)	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3277844 =	NA (NA)	6 (0.050)	4/162	NT	NA	noncoding (26/29 nt)	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 148 total aligned reads displayed.

ATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCA  >  NC_000913/3277723‑3277916

  tCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGaa                                                                                              >  1:1937404/1‑100 (MQ=255)

   cAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAAc                                                                                             >  2:3244023/1‑100 (MQ=255)

   cAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAACAAACCCATTGATGGTGTTCACAATGCccgcc                                                                                                 >  2:602590/1‑96 (MQ=255)

    aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGACGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                            >  2:1132416/1‑100 (MQ=255)

    aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                            <  1:1902927/100‑1 (MQ=255)

    aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                            >  1:3087722/1‑100 (MQ=255)

    aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                            >  1:2559900/1‑100 (MQ=255)

    aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                            <  2:484355/100‑1 (MQ=255)

     gCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAGCCCTCACCCGAGGAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGc                                                                                           >  2:955242/1‑100 (MQ=255)

     gCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGc                                                                                           >  2:3026759/1‑100 (MQ=255)

         aaTGTTAAAAAGAGGACATCCTCCTGCCGCCTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCACAGATGCCGTCCACAATGCCCGCCGAACGCAtcc                                                                                       >  2:768433/1‑98 (MQ=255)

          aTGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCg                                                                                      <  2:1527128/100‑1 (MQ=255)

           tGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgt                                                                                     <  1:3176087/100‑1 (MQ=255)

             ttAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtgt                                                                                   <  2:2298837/100‑1 (MQ=255)

               aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                                  >  2:3004471/1‑99 (MQ=255)

               aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTg                                                                                 <  2:2747758/100‑1 (MQ=255)

                aaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGa                                                                                <  2:1628974/100‑1 (MQ=255)

                 aaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGCACGCATACGTGTTGAc                                                                               >  2:367080/1‑100 (MQ=255)

                 aaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAc                                                                               <  1:1464646/100‑1 (MQ=255)

                 aaaGAGGACATCCTCCTGCCGACTGGGAAAACCGCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCCCAATGCCCGCCGAACGCAATCGTGTTGAc                                                                               >  2:2133449/1‑100 (MQ=255)

                  aaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAcc                                                                              <  2:2318320/100‑1 (MQ=255)

                      ggACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCG                                                                          >  1:733243‑M2/1‑100 (MQ=255)

                      ggACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCG                                                                          >  2:910242‑M2/1‑100 (MQ=255)

                       gACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGG                                                                         <  1:2785582‑M2/100‑1 (MQ=255)

                        aCATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGG                                                                        <  1:2173110‑M2/100‑1 (MQ=255)

                        aCATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGG                                                                        >  1:2536130‑M2/1‑100 (MQ=255)

                        aCATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGG                                                                        <  2:2449496‑M2/100‑1 (MQ=255)

                         cggatggcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCggg                                                                        >  1:2644915‑M1/72‑99 (MQ=255)

                                ctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAATCCATTGAGGGTGTTCACAATCCCCGCCGATCGCATTCGTGTTGACCAGCGGGCATCCttt                                                                <  2:2729790/100‑1 (MQ=255)

                                cctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCAAACGCATTCGTGTTGACCAGCGGGCATCCt                                                                  >  2:3127605‑M1/65‑98 (MQ=255)

                                 tGCCGACTGGGAAACCCTCACCCGAGAAACCGAAGACACCCATTGATGGTGTTCACAATGCCCGCCGACCGCATTCGTGTTGACCAGCCGGCATCCttcc                                                               >  2:1030365/1‑98 (MQ=255)

                                 tGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtc                                                               <  1:586689/100‑1 (MQ=255)

                                  gCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtct                                                              <  1:2419796/100‑1 (MQ=255)

                                  gCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtct                                                              <  1:618621/100‑1 (MQ=255)

                                   ccGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                             <  1:2359696/100‑1 (MQ=255)

                                   ccGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                             <  1:277055/100‑1 (MQ=255)

                                     gACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                             <  2:473652/98‑1 (MQ=255)

                                      aCTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACt                                                          <  1:3244051/100‑1 (MQ=255)

                                       cTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTc                                                         <  1:1308770/100‑1 (MQ=255)

                                        tGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcc                                                        <  1:1245769/100‑1 (MQ=255)

                                         gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                       <  1:793992/100‑1 (MQ=255)

                                         gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                       <  1:844731/100‑1 (MQ=255)

                                         gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGACCGACGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                       <  2:288279/100‑1 (MQ=255)

                                          ggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcccc                                                      >  1:754971/1‑100 (MQ=255)

                                           gAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCg                                                     <  2:2403557/100‑1 (MQ=255)

                                           gAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCg                                                     >  1:2860353/1‑100 (MQ=255)

                                            aaaCCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGAGCATCCTTTCTCACTCCCCg                                                     >  2:2827735/1‑99 (MQ=255)

                                             aaCCATCACCCGAGACACAGAAGCAACCTATTGATGGTGTTCACCACGCACGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcc                                                        <  1:955247/95‑1 (MQ=255)

                                               cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCa                                                 >  2:1434986/1‑100 (MQ=255)

                                               cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTACCCGACCa                                                 >  2:3217502/1‑100 (MQ=255)

                                                ccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAg                                                <  2:299766/100‑1 (MQ=255)

                                                ccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAg                                                <  1:812726/100‑1 (MQ=255)

                                                 cTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGa                                               >  2:2678742/1‑100 (MQ=255)

                                                    aCCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATc                                            <  1:2975829/100‑1 (MQ=255)

                                                    aCCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCATGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATc                                            >  2:2279370/1‑100 (MQ=255)

                                                       cGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTTGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACt                                         >  2:1293586/1‑100 (MQ=255)

                                                             aCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcc                                   >  1:1876139/1‑100 (MQ=255)

                                                               agaagaAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggtttcttctgtttctcgg                                 <  1:1674062‑M2/100‑39 (MQ=255)

                                                               agaagaAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcccc                                 >  2:2329251/1‑100 (MQ=255)

                                                                gaagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCa                                >  1:513179/1‑100 (MQ=255)

                                                                 aagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAg                               <  1:1490001/100‑1 (MQ=255)

                                                                   gaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGcc                             <  1:2688740/100‑1 (MQ=255)

                                                                   gaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGcc                             >  1:2865801/1‑100 (MQ=255)

                                                                      agccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCttt                          >  1:2202029/3‑100 (MQ=255)

                                                                      aCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCttt                          <  2:1937392/100‑1 (MQ=255)

                                                                       cccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTc                         >  2:1592443/1‑100 (MQ=255)

                                                                         cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                       <  1:1689873/100‑1 (MQ=255)

                                                                            tGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGt                    <  2:1469838/100‑1 (MQ=255)

                                                                            tGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGt                    <  1:2963457/100‑1 (MQ=255)

                                                                             gATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTc                   >  1:2334520/1‑100 (MQ=255)

                                                                             gATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTc                   >  2:21518/1‑100 (MQ=255)

                                                                              aTGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTcc                  <  2:14324/100‑1 (MQ=255)

                                                                              aTGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTcc                  <  1:1427500/100‑1 (MQ=255)

                                                                                ggTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCtt                >  2:1549655/1‑100 (MQ=255)

                                                                                ggTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCtt                >  1:3237169/1‑100 (MQ=255)

                                                                                  tgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTcc              >  1:1736600/1‑100 (MQ=255)

                                                                                  tgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTcc              >  2:1558135/1‑100 (MQ=255)

                                                                                   gtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggtttcttctggttcgctggtgagggttttccagtcgg              <  1:957139‑M2/99‑58 (MQ=255)

                                                                                    ttCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAg            <  2:754970/100‑1 (MQ=255)

                                                                                     tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg           <  1:1745593/100‑1 (MQ=255)

                                                                                     tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg           >  1:318389/1‑100 (MQ=255)

                                                                                     tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg           <  1:161506/100‑1 (MQ=255)

                                                                                     tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg           >  2:184192/1‑100 (MQ=255)

                                                                                     tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAg            <  1:1030370/99‑1 (MQ=255)

                                                                                      cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc          >  1:1785298/1‑100 (MQ=255)

                                                                                      cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc          <  1:3136535/100‑1 (MQ=255)

                                                                                      cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc          >  2:1319921/1‑100 (MQ=255)

                                                                                      cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc          <  1:1429185/100‑1 (MQ=255)

                                                                                       acaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggtttcttctgtttctcgggtgagggtttcccagtcggcagga         <  2:639756‑M2/100‑63 (MQ=255)

                                                                                       acaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCt         >  1:1156458/1‑100 (MQ=255)

                                                                                        caATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTa        >  1:170035/1‑100 (MQ=255)

                                                                                        caATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTCCCAGGCTa        <  2:3018572/100‑1 (MQ=255)

                                                                                         aaTGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTAt       <  1:2342478/100‑1 (MQ=255)

                                                                                          aTGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggtttcttctgtttctcgggtgagggtttcccagtcggcaggagga      <  1:1783621‑M2/100‑66 (MQ=255)

                                                                                           tgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATcc     >  1:602590‑M1/6‑100 (MQ=255)

                                                                                            gcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCg    <  1:2024215‑M1/96‑1 (MQ=255)

                                                                                             cccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGc   <  1:1133288‑M1/97‑1 (MQ=255)

                                                                                             cccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGc   <  2:2594035‑M1/97‑1 (MQ=255)

                                                                                             cccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGc   <  2:2668171‑M1/97‑1 (MQ=255)

                                                                                              ccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCa  >  1:2396960‑M1/3‑100 (MQ=255)

ATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCA  >  NC_000913/3277723‑3277916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.