| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,956,978 | Δ1 bp | 15.9% | coding (843/894 nt) | ilvY ← | transcriptional activator of ilvC; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,956,978 | 0 | T | . | 15.9% | 511.7 / 91.6 | 176 | coding (843/894 nt) | ilvY | transcriptional activator of ilvC; autorepressor |
| Reads supporting (aligned to +/- strand): ref base T (74/73); new base . (8/20); total (82/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.98e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.85e-01 | |||||||||||
Only 100 of 179 total aligned reads displayed.
AAAATGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTT > NC_000913/3956879‑3957077 | aaaaTGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGt < 2:3143615/100‑1 (MQ=255) aaaTGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTa < 1:298141/100‑1 (MQ=255) aaaTGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTa < 2:1611404/100‑1 (MQ=255) tGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGcc < 1:462902/100‑1 (MQ=255) gCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCg < 1:1167481/100‑1 (MQ=255) ccTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGc < 2:1943269/100‑1 (MQ=255) cTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCt < 1:1007808/100‑1 (MQ=255) cTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCt < 2:2744047/100‑1 (MQ=255) cTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCt > 2:695326/1‑100 (MQ=255) tGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCtt < 2:162955/100‑1 (MQ=255) agaGCGCGGCGCTGATCAGGGCTACGCGGGCGACAACGTTATCTGTGGTTCGGGAAGAGCTTCCAGAATGCCTCAATTAGCGGGTACATG‑AGCCGCtaat < 2:2669293/98‑4 (MQ=255) aTAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaat < 2:1143612/100‑4 (MQ=255) aTAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaat < 2:692661/100‑4 (MQ=255) aTAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaat < 1:2638521/100‑4 (MQ=255) aGCGCTTCGCTTATCAGGCCTACCTGCGGGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaat < 2:777271/98‑4 (MQ=255) aGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaattg < 1:569566/100‑6 (MQ=255) aGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTc < 1:1800628/100‑1 (MQ=255) aGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTc < 1:3667903/100‑1 (MQ=255) gcgcTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCTACATG‑AGCCGCtaattga < 1:329640/100‑7 (MQ=255) gcgcTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCt > 1:2879057/1‑100 (MQ=255) agcgaagcgctATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGACGCTTTTTCt > 2:3482130/11‑100 (MQ=255) cgcttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTg < 1:2033279/100‑1 (MQ=255) gcttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGACTGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTgc > 1:1663218/1‑100 (MQ=255) gcttcgcttATCAGGCCTACCCGCGCCACAACGTCATGTGTGGTTCGGCAAAATCTTCCAGTATGCCTCAATTAGCGGCTACATG‑AGCCGCtaattgagg < 2:2354472/100‑9 (MQ=37) gcttagcttaACAGGCCTACCCGCGGGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCGAAATTAGCGGCTACATG‑AGCCGCtaattgagg < 2:499439/100‑9 (MQ=25) cttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTgcg < 2:572276/100‑1 (MQ=255) cttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTgcg > 1:2004953/1‑100 (MQ=255) ttcgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTgcgc < 2:1782195/100‑1 (MQ=255) tcgcttAGCAGGCCTACCCGCTCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTgcg < 2:2587683/98‑1 (MQ=255) cgcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcac < 2:1378610/100‑1 (MQ=255) gcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcaca > 1:968213/1‑100 (MQ=255) gcttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcaca > 2:24085/1‑100 (MQ=255) cttATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGcacac < 1:184781/100‑1 (MQ=255) tATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCacacac > 1:2752267/1‑100 (MQ=255) tATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCacacac > 1:1329004/1‑100 (MQ=255) ggCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCa > 1:2924133/1‑100 (MQ=255) gCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAg < 1:614087/100‑1 (MQ=255) tACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTc < 2:796769/100‑1 (MQ=255) cccGTGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCaa > 1:2618902/1‑100 (MQ=255) cgcgcgACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAAc < 2:3756639/100‑1 (MQ=255) cgcgcgACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAAc > 1:2029111/1‑100 (MQ=255) cgcgGCAACGTCGTTTGTGGTTCGGCAAAATCTTCCAGAATACCTCAATTAGCGGCT‑CGTGTAGACGCTTTTTCTCCGCACACACGCGCACCTCaaa > 2:1527241/1‑97 (MQ=255) cgACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCg > 1:1417495/1‑100 (MQ=255) cgACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCg > 1:808189/1‑100 (MQ=255) cgACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCg > 1:1648195/1‑100 (MQ=255) aCGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTtc < 1:2693427/100‑1 (MQ=255) aCGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTtc > 1:1810631/1‑100 (MQ=255) aCGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTtc > 1:1450629/1‑100 (MQ=255) cGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTtct < 1:3250972/100‑1 (MQ=255) gTCATTTGTGGTTCGGCAAAATCTTCCAGCATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTtctc < 2:1285574/100‑1 (MQ=255) gTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTtctc > 1:291712/1‑100 (MQ=255) tttGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCAt < 1:3371404/98‑1 (MQ=255) tttGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCCCATCg > 2:2782423/1‑100 (MQ=255) tgGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTgc < 2:1095376/100‑1 (MQ=255) tgGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTgc > 1:3701304/1‑100 (MQ=255) ggTTCGGCAAAATCTTCCAGAGTGCCTCAATTAGCGGCT‑CATGTATCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCcgcg > 2:1391360/1‑100 (MQ=255) ggTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTgcg < 1:2195542/100‑1 (MQ=255) ggTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTAAAACGGCGTTTTCTCATCCCTgcg > 1:1081887/1‑100 (MQ=255) ggCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACGCGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTa < 2:365728/100‑1 (MQ=255) ggCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTa > 2:1600609/1‑100 (MQ=255) gCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTaa > 2:3492125/1‑100 (MQ=255) aaaaTCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTaaaa < 2:1795028/100‑1 (MQ=255) aTCTTCCAGAATGCCTCAATTAGCGGCT‑GATGTATCCGCTTTTTCTGCACACACACGCCCAGCTCAAACGGCGTTTTCTTATCGCTGCGCTCTAAAatca < 2:3795657/100‑1 (MQ=255) cTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAatcatc > 2:1214837/1‑100 (MQ=255) cTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAatcat < 1:3118233/99‑1 (MQ=255) ttCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCCGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAAtcatca > 2:319310/1‑100 (MQ=255) ttCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAAtcatca > 1:2096303/1‑100 (MQ=255) ttCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAAtcatca < 1:154750/100‑1 (MQ=255) tCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCAc < 2:2074131/100‑1 (MQ=255) cAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCAcgc > 1:834844/1‑100 (MQ=255) aaTGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCTCACACACGCCCAGCTCAAACGTCGTTTTCTCATCTCTGCGCTCTAAAATCATCACGCgg < 2:3802361/99‑1 (MQ=255) tGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCgg < 1:3246449/97‑1 (MQ=255) tGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTa < 2:1894175/100‑1 (MQ=255) tGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTa < 2:2790933/100‑1 (MQ=255) gCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTAc > 1:2380472/1‑100 (MQ=255) cgcagaaaaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTAc > 1:2337455/10‑100 (MQ=38) gcagaaaaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACg > 2:2023936/9‑100 (MQ=38) ccTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACg < 1:3547237/100‑1 (MQ=255) ccTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACg > 1:3238615/1‑100 (MQ=255) cTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTTAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCAGTTACGc > 2:1125784/1‑100 (MQ=255) gaaaaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCAc > 2:915606/6‑100 (MQ=255) cAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCAc > 1:870741/1‑100 (MQ=255) cAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCAc > 1:2265498/1‑100 (MQ=255) cAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCAc > 1:817035/1‑100 (MQ=255) cAATTAGCGGCT‑CATGGAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTGTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCAc < 2:3465765/100‑1 (MQ=255) aaTTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCAcc < 2:3319953/100‑1 (MQ=255) aaTTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGAACACACGCCCAGCTCAAACGGCGTTTTCTGATAGATGCGCTCTAAAATCATCACGCGGATacacac > 2:1191120/1‑99 (MQ=255) atgaGCGGCG‑CGTGTAGCCGCTGTTTCTGCGCGCTCACGCCCAGCGCAAATGGCGTTTTCTCCTCGCTGCGCTCTAAAGTCATCCCGCGGTTACGCAcc < 2:3052587/96‑1 (MQ=255) aaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCgg > 1:755841/3‑100 (MQ=255) aaaGCGGCTACATG‑AGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCgg > 2:47509/3‑100 (MQ=255) ggCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCgg > 2:2908822/1‑100 (MQ=255) gCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCggg > 2:360682/1‑100 (MQ=255) cT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCgggg < 2:2403757/100‑1 (MQ=255) cT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCgggg > 2:1370357/1‑100 (MQ=255) cATGTAGCCGCTTTTTTTTTTTACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCt > 2:3110170/1‑100 (MQ=255) tGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTg > 1:2257788/1‑99 (MQ=255) tGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGt < 1:594656/100‑1 (MQ=255) tGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGt < 1:2165834/100‑1 (MQ=255) tGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGt < 1:1872795/100‑1 (MQ=255) gTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGtt > 1:3797341/1‑100 (MQ=255) | AAAATGCCTGATAGCGCTTCGCTTATCAGGCCTACCCGCGCGACAACGTCATTTGTGGTTCGGCAAAATCTTCCAGAATGCCTCAATTAGCGGCT‑CATGTAGCCGCTTTTTCTGCGCACACACGCCCAGCTCAAACGGCGTTTTCTCATCGCTGCGCTCTAAAATCATCACGCGGTTACGCACCGGTTCGGGGCTGTTT > NC_000913/3956879‑3957077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |