| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,531,118 | Δ1 bp | 15.3% | coding (534/1122 nt) | sgcX ← | putative endoglucanase with Zn‑dependent exopeptidase domain |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,531,118 | 0 | T | . | 15.3% | 455.9 / 83.4 | 163 | coding (534/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain |
| Reads supporting (aligned to +/- strand): ref base T (62/75); new base . (18/7); total (80/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.67e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 | |||||||||||
Only 100 of 164 total aligned reads displayed.
CTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTT > NC_000913/4531019‑4531216 | cTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGt > 1:217330/1‑100 (MQ=255) tGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTg > 1:1492631/1‑100 (MQ=255) gTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGc > 2:2190603/1‑100 (MQ=255) tACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCt > 2:500743/1‑100 (MQ=255) aCCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCGGCTACACCGAGCAGATCAGTACAGC‑GTAGACGATCGTCTAGTGCt > 2:758571/1‑99 (MQ=255) ccGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATGCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCttt < 1:498610/100‑1 (MQ=255) gAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTAc < 2:840610/100‑1 (MQ=255) gAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTAc < 1:151662/100‑1 (MQ=255) gAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTAc < 2:2791597/100‑1 (MQ=255) gAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTAc > 1:1620433/1‑100 (MQ=255) aaGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACt < 2:1513340/100‑1 (MQ=255) aGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTg < 2:130238/100‑1 (MQ=255) ccaccaGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGcc < 1:2607509/100‑2 (MQ=25) caccaGATAAACTGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGccc < 1:180129/100‑3 (MQ=25) caccaGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGcac < 1:2160571/100‑1 (MQ=255) caccaGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGccc < 1:2135366/100‑3 (MQ=25) caGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACAcc < 1:2190617/100‑1 (MQ=255) caGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACAcc < 1:2349949/100‑1 (MQ=255) caGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACAcc < 2:1071246/100‑1 (MQ=255) caGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACAcc < 1:285817/100‑1 (MQ=255) caGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACAcc < 1:3715665/100‑1 (MQ=255) caGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGccctgc < 1:2685257/100‑6 (MQ=21) aGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCa > 2:2980446/1‑100 (MQ=255) tAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGTTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGAt > 1:3223737/1‑100 (MQ=255) tAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGAt < 1:3747672/100‑1 (MQ=255) tAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGAt < 1:1244724/100‑1 (MQ=255) cGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCg < 2:222705/98‑1 (MQ=255) cGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGtt > 2:2694003/1‑100 (MQ=255) cGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCCAGTGCTTTACTGCACACCAGATCGtt > 2:3352099/1‑100 (MQ=255) ggCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGttt < 1:2298796/100‑1 (MQ=255) cGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGc < 1:2901355/100‑1 (MQ=255) gATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGTTTTACTGCACACCAGATCGTTTGcc < 1:531045/100‑1 (MQ=255) atatCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCa < 1:1735989/100‑1 (MQ=255) tatCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAg < 2:2455449/100‑1 (MQ=255) tatCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAg < 2:95938/100‑1 (MQ=255) atCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAgg < 1:1073764/100‑1 (MQ=255) tCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGa > 2:3480726/1‑100 (MQ=255) tCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGa > 1:1562396/1‑100 (MQ=255) cAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAgg > 2:694045/1‑98 (MQ=255) cAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAg < 1:2865909/100‑1 (MQ=255) aaGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGGCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAg < 1:2748377/99‑1 (MQ=255) aaGCTCCATAGTACTAATAGCATCCGCTACACCGAGCAGTGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAg < 2:125465/96‑1 (MQ=255) gCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTg > 1:3809030/1‑100 (MQ=255) tCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTgcg > 1:2417977/1‑100 (MQ=255) ccATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTgcgg > 1:1059420/1‑100 (MQ=255) ccATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTgcgg > 1:1913575/1‑100 (MQ=255) tAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGcggcgg < 2:1862183/100‑1 (MQ=255) gTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGt < 2:1891345/100‑1 (MQ=255) cTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTtat < 2:1210635/100‑1 (MQ=255) gATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATAc > 2:632329/1‑100 (MQ=255) gATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATAc > 1:2958196/1‑100 (MQ=255) gCATCCGCCACCTCGAGCAGGGGAGTAAAGA‑CAGGACGAGCGTCTAGTGCTTTACTGCACACCACATCCGATGCCAGGAGGGGCAGCGGATtaca > 2:2504307/1‑93 (MQ=255) cATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGt < 2:724471/100‑1 (MQ=255) aTCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTg > 2:572840/1‑100 (MQ=255) tCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGa > 2:387445/1‑100 (MQ=255) cGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACa < 2:3085623/100‑1 (MQ=255) gCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAg < 2:1888651/100‑1 (MQ=255) gCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGCTGCGGCGGGTTATACAGAGTGACAg > 2:3535651/1‑100 (MQ=255) tACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAgg > 2:2259440/1‑99 (MQ=255) acacCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCg < 1:798815/100‑1 (MQ=255) acacCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCg < 1:1317159/100‑1 (MQ=255) cacCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGt > 1:2650610/1‑100 (MQ=255) nccGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTa > 1:3801490/2‑100 (MQ=255) ccGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTAc < 1:3034302/100‑1 (MQ=255) atctggtgtgCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTAc > 1:1772890/10‑100 (MQ=18) atctggtgtgCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTAc > 1:1161390/10‑100 (MQ=18) cGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCCGATCGTTTGCCAGGAGTTGCGGCGGGGTATACAGAGTGACAGGCGGAcc > 2:2139736/1‑100 (MQ=255) gAGCAGGTCATTACAGC‑ATAGAGGACGGTCTCGTGGTGTACTGCAAACCAGGTCGTTGGCGAGGAGGGGCGGCGGTTCATACAGAGTGACAGGCGTAcc < 2:3595163/99‑1 (MQ=255) ggtgtgCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGAc > 1:2076357/6‑100 (MQ=21) gCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGAc < 2:1939826/100‑1 (MQ=255) cAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGAcc < 1:709100/100‑1 (MQ=255) tgtgCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCt > 2:335304/4‑100 (MQ=25) tgtgCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTCGCGGCGGGATATACAGAGTGACAGGCGTACCGACCt > 2:3040626/4‑100 (MQ=21) aGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCt < 1:2137616/100‑1 (MQ=255) gtgCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTg > 1:228207/3‑100 (MQ=25) ggCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGa > 1:2813129/1‑100 (MQ=255) gCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGaa < 1:3121130/100‑1 (MQ=255) gCAGTAAAGCACTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGaa > 1:3688124/1‑100 (MQ=25) cagtaaagcacTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAAt > 1:537452/11‑100 (MQ=37) cAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAAt < 2:856930/100‑1 (MQ=255) cAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAAt < 1:768831/100‑1 (MQ=255) aGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATg < 2:2549346/100‑1 (MQ=255) aGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATg < 2:203850/100‑1 (MQ=255) gTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGc > 2:3732993/1‑100 (MQ=255) tACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCGCACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATAGAGAGTGACAGGCGTACCGACCTGAATGcc > 2:2301004/1‑100 (MQ=255) tACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGcc < 1:2263247/100‑1 (MQ=255) cAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCa < 1:1316168/100‑1 (MQ=255) cAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCa < 2:1014038/100‑1 (MQ=255) gcacTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCAt > 2:2205632/4‑100 (MQ=255) gcacTAGACGATCGTCTAG‑GCTGTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATc > 1:3067597/4‑100 (MQ=38) gC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGCGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCAt > 2:2611406/1‑99 (MQ=255) gC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATc > 2:599897/1‑100 (MQ=255) gC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATc < 1:280683/100‑1 (MQ=255) gC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGGTATACAGAGGGACAGGCGTACCGACCTGCATGCCCATc > 2:3239660/1‑100 (MQ=255) cGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAg > 2:2528609/1‑100 (MQ=255) cGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAg > 2:1706740/1‑100 (MQ=255) tCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGcgt > 1:1145598/1‑100 (MQ=255) gTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGcgtcg > 2:1544606/1‑100 (MQ=255) gTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCgtcttt > 1:3770092/1‑100 (MQ=255) gTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCgtctt > 2:1432595/1‑99 (MQ=255) | CTGTACCGAAGCCACCAGATAAACGGCGATATCAAGCTCCATAGTACTGATAGCATCCGCTACACCGAGCAGGGCAGTACAGC‑CTAGACGATCGTCTAGTGCTTTACTGCACACCAGATCGTTTGCCAGGAGTTGCGGCGGGTTATACAGAGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTT > NC_000913/4531019‑4531216 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |