| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,524,463 | Δ1 bp | 15.3% | intergenic (+95/+18) | yncE → / ← ansP | ATP‑binding protein, periplasmic, function unknown/L‑asparagine transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,524,463 | 0 | A | . | 15.3% | 370.4 / 64.2 | 131 | intergenic (+95/+18) | yncE/ansP | ATP‑binding protein, periplasmic, function unknown/L‑asparagine transporter |
| Reads supporting (aligned to +/- strand): ref base A (70/41); new base . (12/8); total (82/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 | |||||||||||
Only 100 of 138 total aligned reads displayed.
GTAATAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCTGTGAATTTCA > NC_000913/1524365‑1524562 | gTAATAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAg > 1:3235363/1‑100 (MQ=255)gTAATAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAg > 2:1639346/1‑100 (MQ=255) tAATAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGc < 2:3741069/100‑1 (MQ=255) tAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCgg > 1:1703311/1‑100 (MQ=255) tAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCgg > 1:1943764/1‑100 (MQ=255) aGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCggg < 2:1368276/100‑1 (MQ=255) gATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGc > 2:2664741/1‑100 (MQ=255) atatGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGCTACGT‑GCCGGGC‑a < 2:1460090/100‑1 (MQ=255) tatGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGCTACGT‑GCCGGGC‑aa < 2:1914584/100‑1 (MQ=255) tatGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑a > 1:922664/1‑99 (MQ=255) tGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AAtt > 1:679050/1‑100 (MQ=255) tGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTAGCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGCTACGT‑GCCGGGC‑aaat < 2:504706/100‑3 (MQ=255) tGGCGAGGGGGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGCTACGT‑GCCGGGC‑aaat < 2:1752321/100‑3 (MQ=255) gCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGCTACGT‑GCCGGGC‑AAattc < 1:1486943/100‑2 (MQ=38) gCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGCTACGT‑GCCGGGC‑AAattc < 1:1753191/100‑2 (MQ=38) cGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTg > 1:520998/1‑100 (MQ=255) cGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTg > 2:2734671/1‑100 (MQ=255) aGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGCTACGT‑GCCGGGC‑AAatt < 2:1692037/96‑1 (MQ=38) gggTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCaa > 2:1035589/1‑100 (MQ=255) gTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAAtt < 1:2674476/100‑1 (MQ=255) tGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTa > 1:3068788/1‑100 (MQ=255) gAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTaa > 2:121541/1‑100 (MQ=255) gAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTAGCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTaa > 2:2350232/1‑100 (MQ=255) acaaCGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAAc > 1:3534578/3‑100 (MQ=255) aaaaCGGTGAGACTTGCCTGCCTTTTATCGCGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTCCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAAc < 2:2298252/100‑1 (MQ=255) aaaaCGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAAc > 2:3435652/1‑100 (MQ=255) aCGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCg > 2:2624596/1‑100 (MQ=255) cGGTGAGACTTGCCTGCCTTTTAAAAAAGCGTATAAGGCACTTTCGTCAGTAATCTGAATTTACGCAGC‑ACGTACCCGGGC‑AAATTTGCAATTAAc > 2:1313504/1‑96 (MQ=255) ggTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGcc > 2:1100922/1‑100 (MQ=255) gaCTTGTCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTc > 1:3447163/1‑100 (MQ=255) ttGCCTGCCTTTTATCACGGTGTATCCGGCAGTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAg < 2:782622/99‑1 (MQ=255) ttGCCTGACTTTTATCACGCCGCATCCGGCACCTTCGTCAGTAGTCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAgg > 1:1291285/1‑100 (MQ=255) tgcctgccTTTTATCACGGCGTATCCGGGACTTGCGTCAGTAATCTGAATTTGCTCGGC‑ACGTAGCCGGGC‑AATGTTGCAATTAACTCGCCGTTTCAGGc < 2:3233790/100‑1 (MQ=255) cctgcctTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCtt > 1:897798/1‑100 (MQ=255) cctTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAac < 1:2261926/100‑1 (MQ=255) cctTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAac < 1:1944324/100‑1 (MQ=255) cctTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAac > 1:1133319/1‑100 (MQ=255) ctTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAaca < 2:1973911/100‑1 (MQ=255) ttttATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAacac > 1:1076284/1‑100 (MQ=255) aTCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAAtt > 2:3094419/1‑100 (MQ=255) aTCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAAtt > 1:3253836/1‑100 (MQ=255) aCGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCACTTAACTCGCCGTTTCAGGCTTAAACACCATTTcc > 1:2945295/1‑100 (MQ=255) aCGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTcc > 2:2105545/1‑100 (MQ=255) aCGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTcc > 1:1279323/1‑100 (MQ=255) aCGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTcc > 1:663287/1‑100 (MQ=255) ggCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATCTCCTg > 2:2753387/1‑100 (MQ=255) cGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACATTTTCCTg < 1:83451/98‑1 (MQ=255) gTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGtt < 2:1676815/99‑1 (MQ=255) tATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGtttt > 1:743302/1‑100 (MQ=255) aTCCGGCACGTTCGGCAGTCATCTGCATTTGCCCGGC‑ACGTAGCCGTGC‑ACTTTGGCAATTAACTCGCCGCTACAGGCCTAAACACAATTTCCTg > 2:3749662/1‑95 (MQ=255) ccGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTttct > 1:3091279/1‑100 (MQ=255) cGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTttctt > 1:1438859/1‑100 (MQ=255) cGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTttctt < 2:2207680/100‑1 (MQ=255) ggCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTttcttc > 2:2625915/1‑100 (MQ=255) gCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCa < 1:304090/100‑1 (MQ=255) gCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCa < 2:3458410/100‑1 (MQ=255) cACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCAt < 2:18881/100‑1 (MQ=255) cACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCAt > 2:3658230/1‑100 (MQ=255) tttCGTCAGTAAGCTGAATTTGCCTGGA‑ACGTAGCCGGGC‑AATTTTTCTATTAACTCTCCGTTTCATGCTTAAACACAATTTCCTGTTTTTCTTCATCt < 2:3362696/99‑1 (MQ=255) ttCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGTGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTc > 2:1755709/1‑100 (MQ=255) gTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTc > 2:604545/1‑100 (MQ=255) gTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTc > 2:604667/1‑100 (MQ=255) gTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTc < 1:231560/100‑1 (MQ=255) gTCAGTAATCTGAATAAGCCCGGC‑ACGTAGCCGTAC‑AGTGTTGCAATTAACTCGCCCTTTCACGCTTAAACACCAGTTCCTTTTATTCTTCATATTCCt > 2:1590793/1‑99 (MQ=255) aGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTcgac < 1:2932053/100‑1 (MQ=255) aGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTcgac < 1:2390859/100‑1 (MQ=255) gTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTcgacg > 2:2323112/1‑100 (MQ=255) gTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTcgacg < 2:1816554/100‑1 (MQ=255) aTCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACt > 1:1744379/1‑100 (MQ=255) tCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTg > 1:876344/1‑100 (MQ=255) gcaaaattGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTgg > 1:152639/7‑100 (MQ=38) tGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGATGACTGgc < 2:2969369/100‑1 (MQ=255) tGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGgc > 2:1371376/1‑100 (MQ=255) tGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGgc > 2:450037/1‑100 (MQ=255) gAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGgcg > 1:303339/1‑100 (MQ=255) gAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGgcg < 1:3049423/100‑1 (MQ=255) aaattGCCCGGCTACGT‑GCCGGGCAAATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGgcg > 2:3732738/4‑100 (MQ=37) aaTTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAAATCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGgcgc < 1:1032857/100‑1 (MQ=255) aattGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCa > 1:3774744/3‑100 (MQ=255) aTTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCa > 1:2000095/1‑100 (MQ=255) tGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCCGTg > 2:744487/1‑100 (MQ=255) tGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAg > 2:870612/1‑98 (MQ=255) tGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTg > 1:1820508/1‑100 (MQ=255) tGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTg > 2:233331/1‑100 (MQ=255) tGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTg > 1:3586916/1‑100 (MQ=255) tGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTg > 2:3662378/1‑100 (MQ=255) cccGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGc > 2:2432337/1‑99 (MQ=255) cccGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCt > 2:517853/1‑100 (MQ=255) cccGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCt > 1:2228664/1‑100 (MQ=255) cccGGC‑ACGTAGCCGGGC‑AAGTTGGCAATTAACGCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGc < 1:3822601/99‑1 (MQ=255) cGGC‑ACGTAGCCGTGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGTCTGGCGCAGTGCtgt < 2:681497/100‑1 (MQ=255) cGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCTGTGAAtt > 1:3673092/1‑100 (MQ=255) cGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTCTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCTGTGAAtt > 1:3673182/1‑100 (MQ=255) aGCCGGGC‑AATTTTGTAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTCTTCTTCATCTTCCTCGACGACTGGCGCAGTGCTGTGAATTTCa < 1:2037339/100‑1 (MQ=255) aGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGTGCAGTGCGTTGAATTTCa > 2:2497649/1‑100 (MQ=255) aGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCTGTGAATTTCa < 1:3298662/100‑1 (MQ=255) aGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCTGTGAATTTCa < 1:2664760/100‑1 (MQ=255) aGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCTGTGAATTTCa < 1:848356/100‑1 (MQ=255) aGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCTGTGAATTTCa < 2:1252802/100‑1 (MQ=255) aGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCTGTGAATTTCa < 2:876335/100‑1 (MQ=255) | GTAATAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCTGTGAATTTCA > NC_000913/1524365‑1524562 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |