| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,462,889:1 | (C)9→10 | 100% | intergenic (+243/‑123) | fadL → / → yfdF | long‑chain fatty acid outer membrane transporter/uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,462,880 | 1 | . | C | 56.5% | 207.7 / 205.4 | 115 | intergenic (+234/‑132) | fadL/yfdF | long‑chain fatty acid outer membrane transporter/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base . (28/22); new base C (31/34); total (59/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 140 total aligned reads displayed.
AAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAA > NC_000913/2462783‑2462972 | aaGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑c‑c < 2:693756/100‑1 (MQ=255) aGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCCGGATACT‑‑‑c‑c‑c > 1:3439173/1‑100 (MQ=255) aGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑ctc > 2:2461517/1‑98 (MQ=255) aGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑c‑c‑c < 1:3038846/100‑1 (MQ=255) aGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑c‑c > 1:3775585/1‑99 (MQ=255) cGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑c‑c‑c‑cc < 2:3777074/100‑1 (MQ=255) cGGTATCCACAGACAAACCGGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTATCTGCATTTTCAGGATACT‑‑‑c‑c > 2:2384873/1‑97 (MQ=255) ggTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑c‑c‑c‑ccc > 1:3342996/1‑100 (MQ=255) ggTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑c‑c‑c‑ccc > 2:39653/1‑100 (MQ=255) gTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑c‑c‑c‑cccc < 2:3210346/100‑1 (MQ=255) aTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑c‑c‑c‑cccccc < 2:1272363/100‑1 (MQ=255) tCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTGCTTCTCAGAGCGTTTAATTTTCTGGATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCt > 2:3292427/1‑100 (MQ=255) tCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑c‑c‑c‑ccccccc < 2:79559/100‑2 (MQ=255) ccACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑c‑c‑c‑ccccccct > 1:2650156/1‑98 (MQ=255) cacaGACAAACCTGATCGGAAAGGCATATTTTCAGACGTTCTGCTCGTCCTTCTCAAACAATTCCCTTTTCTGCATTTCCAGGATACT‑‑‑c‑c‑c‑ccccccctg < 2:678989/100‑4 (MQ=255) cacaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑c‑c‑c‑cccccccct > 1:2994084/1‑97 (MQ=255) cacaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑c‑c‑c‑cccccccct > 1:2927916/1‑97 (MQ=255) cacaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTgg > 2:488501/1‑100 (MQ=255) acaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGc < 2:3342971/100‑1 (MQ=255) caGACAACCCTGAATGGAAAGGCATATTTTCACGCTTTCTGCTTCTCCTTCTCAAAGTGTTTCCTTTTCTGCATTTCCAGGATACT‑‑‑c‑c‑c‑ccccccctggc < 2:474995/100‑6 (MQ=255) caGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑c‑c‑c‑ccccccctggc < 1:3119474/100‑6 (MQ=255) gACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTGAAGGATACT‑‑‑t‑c‑c‑ccccctcttatc > 1:1370298/1‑92 (MQ=255) cAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATtg > 2:207792/1‑100 (MQ=255) aaaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATtg < 1:2940374/100‑1 (MQ=255) aaaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTGCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATtg < 2:2042024/100‑1 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGCTACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTgcg > 2:598162/1‑100 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTgcg < 1:1971733/100‑1 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTgcg > 2:350519/1‑100 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTgcg > 2:1547021/1‑100 (MQ=255) cTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTgcgc > 1:2988231/1‑100 (MQ=255) cTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTgcgc < 1:3547419/100‑1 (MQ=255) tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTgcgc < 1:2916087/100‑1 (MQ=255) tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑CAC‑CCCCCCTAGCTAtt > 1:2171878/1‑94 (MQ=255) tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCt > 1:2034555/1‑100 (MQ=255) agAAGGGATAGGCACATTTTCAGGCGTTCTGCTCGACCTGCTCAAAGAGTTTACTTTTCTGCATTTCTATGATACT‑‑‑C‑C‑C‑CCCCCCTGCCTATTGTtcg > 2:3335526/2‑98 (MQ=255) gAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCt > 1:2808285/1‑100 (MQ=255) gAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCt < 1:1012438/100‑1 (MQ=255) aaGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTc < 1:1576759/100‑1 (MQ=255) aaGGAAAAGGCTTATTTTCAGGCGTTCTTCTCGTCCTTCTAAAAGATTTTACTTTTCTGCATTTCCAGGATTCTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCt < 1:898561/99‑1 (MQ=255) ggAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATa < 1:2796055/100‑1 (MQ=255) gAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATac > 1:453869/1‑100 (MQ=255) gAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATaca > 2:924899/1‑100 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATaccc > 1:345667/1‑98 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTCTACTTTTCTGCATTTCCAGGATACT‑‑‑T‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATacac < 1:2480853/99‑1 (MQ=255) tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑CTC‑C‑CTCCCCCCGATATGGTGCGCTCATACACTCAGAt > 1:775367/1‑100 (MQ=255) atTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAAtt < 2:796813/100‑1 (MQ=255) tttCAGGCGGTCTGCTCGTCCTTCCCAAAGAGGTTTCTTTTCTGCATTTCCAGGATACTCC‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAAt < 1:738153/98‑1 (MQ=255) tCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑C‑C‑C‑CCCCCCTGGCTATTGTGCCCTCATACCCTCACACTaaa > 1:910217/1‑100 (MQ=255) tCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAg < 2:1995626/100‑1 (MQ=255) cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGa > 2:2818501/1‑100 (MQ=255) cGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAgg < 2:2811047/100‑1 (MQ=255) ttCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTc > 2:3636920/1‑100 (MQ=255) cTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCta < 2:1206269/100‑1 (MQ=255) tGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTTCGCTCATACACTCAAATTAACGATAGGTTCta > 2:1405541/1‑100 (MQ=255) tGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCta > 1:128989/1‑100 (MQ=255) cTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaa < 1:425058/100‑1 (MQ=255) cGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCCCC‑C‑C‑CCCCCCTGGCTATTTAGCGCTAATACACCCACATTAAAGCTAGGTTCtaaa > 1:441343/1‑100 (MQ=255) atctcTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaata < 1:3652531/96‑1 (MQ=255) tCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTaaataaat > 1:2452333/1‑100 (MQ=255) tCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTCCCTATTGTGCGCTCATACACTCAAATTCAACACAGATTCTaaataaat > 2:2835520/1‑100 (MQ=255) ccTTCTCAAATAGTTTACTTTTCTGTATTTCCATGATACT‑‑‑C‑C‑CTTTCCCCTGTCTATTGTGAGTTCATACACTCAAATTAAATATAGGTTCTaaataaat < 2:840663/100‑1 (MQ=255) ccTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATg < 1:1743115/100‑1 (MQ=255) ccTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATg < 1:1966263/100‑1 (MQ=255) ccTTCTCAAAAAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATg < 2:218278/100‑1 (MQ=255) cTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTaaataaat > 1:2630453/1‑99 (MQ=255) cTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATg < 1:2166838/100‑1 (MQ=255) cTTCACAAACAGTTTACTTTTCTGCATTTCCAGGATCCT‑‑‑C‑C‑CACCCACCTGGCTATTGTACGCTCATACACTCAAATTAAAGATAGGTTCTaaataaat < 2:740120/99‑1 (MQ=255) ttCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCCTACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 1:3359975/100‑1 (MQ=255) cAAAGAGTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATTAGCGt > 1:3602155/1‑100 (MQ=255) aaGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑G‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGATTCTAAATAAATGAGCGttt > 2:3710298/1‑99 (MQ=255) agTTTACTTTTCTGCATTTCCAAGATACC‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttttt < 2:1310500/99‑1 (MQ=255) gTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTg > 1:2808600/1‑100 (MQ=255) gTTTACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTg < 1:1612732/100‑1 (MQ=255) gTTTACTTTTCTGCATTTCCAGGATACT‑‑‑‑‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAt > 2:119133/1‑100 (MQ=255) gTTCACTTTTCTGCATTTCCAGAATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTg < 2:58402/100‑1 (MQ=255) tttACTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 2:3606226/100‑1 (MQ=255) ttACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa > 1:2347238/1‑100 (MQ=255) tACTTTTCTGCATTTCCAGGATACTCC‑C‑C‑C‑CCCCCCTGGCTATTTGGCGCTCATACACTCAAAGTAAAGATAGGTTCTAAATAAACGAGCGTTTTTTg > 1:531964/1‑98 (MQ=255) nttttCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGTTTTTGTCTGCTCATACACTCAATTAAAAGATATGTTCTAAATAAATGAGCGtttttgaa > 2:1900598/2‑93 (MQ=255) cTTTTCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTTTGCCCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGGTAGt > 1:3704690/1‑100 (MQ=255) cTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGTTatt > 2:906433/1‑97 (MQ=255) ttCTGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 1:239606/100‑1 (MQ=255) tGCATTTCCAGGATACTCC‑C‑C‑C‑CCCCCCTGGTCATTGTGCCCTCATACACTCAAATTAAAGATAGGTTCTCAATAAATGAGCGTTTTTTGATAGTTTAtt > 2:1422521/1‑100 (MQ=255) tGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTCTTGCGCGGTCATACACTCAAATTAAAGATAGGGTCTAAATAAATGAGCGTTATTTGATAGtat > 1:3039440/1‑94 (MQ=255) tGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAttt < 2:2552156/100‑1 (MQ=255) tGCATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAACTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAttt > 1:865799/1‑100 (MQ=255) tGCATTTCCAAGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTc < 2:2134674/100‑1 (MQ=255) cATTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa < 1:1755226/100‑1 (MQ=255) aTTTCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAt > 1:1058119/1‑100 (MQ=255) tttCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGTGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTa > 2:1090081/1‑100 (MQ=255) tttCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTa < 1:2391285/100‑1 (MQ=255) tttcAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTTATACACTTAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTa < 2:1358165/97‑1 (MQ=255) ttCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAtt > 1:1717200/1‑99 (MQ=255) ttCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTa < 2:1726650/100‑1 (MQ=255) ttCCAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTa < 2:128989/100‑1 (MQ=255) ccAGGATGCT‑‑‑C‑C‑C‑CCCCCCTGGCTAGTGGGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAg < 1:608246/98‑1 (MQ=255) cAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAgg < 1:534117/99‑1 (MQ=255) cAGGATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGt > 2:2241463/1‑100 (MQ=255) cAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTa < 1:1065454/100‑1 (MQ=255) ggATACTC‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTaa < 1:98559/100‑1 (MQ=255) | AAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑‑‑C‑C‑C‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAA > NC_000913/2462783‑2462972 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |