| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,809,774:1 | (T)7→8 | 100% | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,809,767 | 1 | . | T | 82.4% | 378.0 / 79.0 | 136 | coding (151/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base . (9/15); new base T (51/60); total (61/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 158 total aligned reads displayed.
GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAC > NC_000913/2809668‑2809861 | ggATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCg < 1:2173631/100‑1 (MQ=255) gATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑t > 1:3267067/1‑100 (MQ=255) gCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑tt‑tt < 1:485853/100‑1 (MQ=255) aaaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑tt‑tttt < 1:578992/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑tt‑ttttt < 1:1221421/100‑1 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑tt‑ttttttc > 2:2260622/1‑98 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑tt‑ttttttc > 1:3814916/1‑98 (MQ=255) aCAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑tt‑ttttttct < 1:3103410/100‑4 (MQ=255) aCAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTtctc < 1:1603172/100‑1 (MQ=255) cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑tt‑ttttttctc > 1:3050531/1‑96 (MQ=255) cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑tt‑ttttttctc < 1:1983601/100‑5 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑tt‑ttttttctcc < 2:1908777/100‑6 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑tt‑ttttttctcc < 1:3752420/100‑6 (MQ=255) ccGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGcat < 1:3715447/99‑1 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCAttt > 2:2699130/1‑99 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTAt > 1:3356164/1‑100 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATg > 1:353958/1‑100 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTTCTCCTGCATCATTTATGc < 1:2449092/100‑1 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTTCTCCTGCATCATTTATGc < 1:1355987/100‑1 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATgt > 2:263406/1‑99 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCa < 1:1497513/100‑1 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCa > 2:190879/1‑100 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTTCTCCTGCATCATTTATGCAg < 2:1141132/100‑1 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCacg < 1:2583107/100‑3 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAgg > 2:2215465/1‑100 (MQ=255) gTTGTATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCTGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATAAATGATGCAggag < 2:684253/100‑3 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGgc > 2:1755138/1‑99 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTTCTCCTGCATAAATGATGCAggaga < 1:2726641/100‑4 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGACTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATAAATGATGCAggag < 2:2435787/100‑3 (MQ=255) ttATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGcgcg > 1:2557094/1‑100 (MQ=255) tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAg > 1:1794255/1‑100 (MQ=255) atTCCGGTTGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAgn < 1:1885771/100‑2 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGc > 1:1830059/1‑100 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 2:1273553/100‑1 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 1:3437380/100‑1 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 2:3359700/100‑1 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 1:2698964/100‑1 (MQ=255) ggTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGtt < 1:115435/100‑1 (MQ=255) ggTGGCCTTTCCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGtt < 1:2664315/100‑1 (MQ=255) gTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTc < 2:1856379/100‑1 (MQ=255) tGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 2:20922/100‑1 (MQ=255) tGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 2:3427285/100‑1 (MQ=255) gCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTc > 1:733979/1‑100 (MQ=255) gCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTATCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTc > 1:2686589/1‑100 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCCGTTCGTCa > 2:3378035/1‑100 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt < 1:1008603/100‑1 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt > 2:3584144/1‑100 (MQ=255) tttGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt < 2:3075717/100‑1 (MQ=255) ttGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTAc > 2:249154/1‑100 (MQ=255) gCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTAcc > 1:3501532/1‑100 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc > 1:3484938/1‑100 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 2:497022/100‑1 (MQ=255) ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATg < 2:324303/100‑1 (MQ=255) ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATg > 1:1641006/1‑100 (MQ=255) ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGc < 1:439410/100‑1 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGc < 1:657179/100‑1 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt > 1:2748806/1‑100 (MQ=255) tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTTTCCTTCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt > 2:1252778/1‑100 (MQ=255) tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt < 1:991280/100‑1 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTT‑TTTTTTTTCTGCATCATTTTTCCAGCCGCGAGCCAGTTTGTAATTACCGCGTTGc > 2:1468384/1‑100 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 1:243864/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 2:641940/100‑1 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTTTTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 2:2140023/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 2:1974171/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 2:914543/100‑1 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 1:1637349/100‑1 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 1:3352098/100‑1 (MQ=255) aaTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCa < 1:2805451/100‑1 (MQ=255) tGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCTGGCTCGAGCGAGTTCGTCATTACCGCGATGGTGGCAGc > 2:3242178/1‑100 (MQ=255) gCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGGAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCa > 2:2885197/1‑97 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:576539/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:3777955/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg > 1:3675514/1‑100 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:3202847/100‑1 (MQ=255) ccGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGag < 2:1324613/100‑1 (MQ=255) ccGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTGTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagt < 2:2008368/100‑1 (MQ=255) cGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagt < 2:3351639/100‑1 (MQ=255) cGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGa > 2:333169/1‑98 (MQ=255) cGTCTGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCCAGCCAGTTTGTCATCACCGCGCTGCTGACAGCCg > 2:1774817/1‑95 (MQ=255) tGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCTTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTTGCAGCCGGGagtagt > 2:885351/1‑99 (MQ=255) tGGGATTCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGtt < 2:1617759/100‑1 (MQ=255) tGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTTTTTTTTTTTTATTTATGCAGGCGCGAGCCAGTTTGTCATTACCGCGATGCTGGCAGCCGGGAGTTGttt > 2:3727000/1‑100 (MQ=255) gggATTCTCGCCTCTCGAAAGCG‑‑‑TTATTTGTCTACTGCACCATTTATGCAATCGCGAGCCAGTTCGTCATGACCGGCATGCTGGCAGCCGGGAGTAGttt > 2:2764281/1‑100 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:1259665/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg > 2:2484148/1‑100 (MQ=255) ttCTCGCCTCGCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 1:1652865/99‑1 (MQ=255) tctctcCTCTCGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGa < 1:661286/100‑1 (MQ=255) tctcctctcGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAtt > 1:303237/1‑100 (MQ=255) ctcctctcGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtg > 1:3391731/1‑100 (MQ=255) ctcctctcGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtg > 1:3394989/1‑100 (MQ=255) ctcctctcGAAAGCG‑‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 1:1052989/100‑1 (MQ=255) tcctctcGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 1:2810250/100‑1 (MQ=255) cctctcGAAAGCGT‑‑TT‑TTTTTTTTTTTTTTTTTTTATGGAAGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGGAGCCGGGAGTCGTTTGTGGAtttc > 2:2597066/1‑97 (MQ=255) ctctcGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 2:3629249/100‑1 (MQ=255) tctcGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgn < 1:71576/100‑2 (MQ=255) ctcGAAAGCGT‑‑TT‑TTTTTTTTTTTTTTCATTTAAGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTAGCAGCCGGGACTTGTTTGTTGATtcctg > 2:368514/1‑98 (MQ=255) ctcGAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg > 2:2316472/1‑98 (MQ=255) gAAAGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTg < 1:501394/100‑1 (MQ=255) aaaGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGa > 1:2418909/1‑100 (MQ=255) aaGCGT‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAc > 2:2882902/1‑100 (MQ=255) | GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAC > NC_000913/2809668‑2809861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |