| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,866,592:1 | +C | 100% | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 96.4% | 582.1 / 12.7 | 167 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (3/3); new base C (92/69); total (95/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 185 total aligned reads displayed.
CATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑CC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866489‑2866682 | cATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAg > 2:1589699/1‑100 (MQ=255)cATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAg > 2:2182572/1‑100 (MQ=255) ggACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑cc > 1:1954767/1‑100 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑ccctgc > 1:731368/1‑96 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑ccctgc > 2:3251619/1‑96 (MQ=255) tttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGt < 2:3021450/100‑1 (MQ=255) ttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGtt < 2:1216895/100‑1 (MQ=255) tATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGtt < 2:1633015/99‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAg < 1:1383773/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAg > 1:2183021/1‑100 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAgg > 1:1247263/1‑100 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAgg > 1:2837153/1‑100 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGa > 1:2492467/1‑100 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGa > 1:3307163/1‑100 (MQ=255) aGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTc < 2:3133034/100‑1 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTcg > 1:2152048/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTcg > 1:424493/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTcg < 2:1044646/100‑1 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTcg > 1:1338385/1‑100 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCgcgc < 2:805992/100‑1 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCgcgc < 2:2767386/100‑1 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTGTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCgcgc < 2:2441649/100‑1 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCCCGCa > 2:3392870/1‑99 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑CCACCTGCGTTTGCAGGCTTTCGCGCa > 2:2426296/1‑99 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAAc > 2:1294370/1‑100 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAAc > 1:1816869/1‑100 (MQ=255) cTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTCCTCGCGGAACAGCGCTTCGTTATTCAGCCC‑CCTGCTTTTGCAGGATTTCGCGCAAACGgcgc < 1:504508/100‑1 (MQ=255) cGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCTCGCAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAg < 2:1165636/100‑1 (MQ=255) cGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAg > 2:1195633/1‑100 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg < 1:3263144/100‑1 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg > 1:2353886/1‑100 (MQ=255) cTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc > 1:2788255/1‑100 (MQ=255) cTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc > 1:647184/1‑100 (MQ=255) ttGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcc < 1:3815093/100‑1 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcc < 2:740242/99‑1 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc > 1:1601978/1‑100 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc < 2:1395770/100‑1 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa < 2:495587/100‑1 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa < 1:1277157/100‑1 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa > 1:2375247/1‑100 (MQ=255) gcTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCaa < 1:3475552/99‑1 (MQ=255) aCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCaa < 2:1964635/100‑1 (MQ=255) cTGGCCTTTCTGACAGATGCTTACTTCCTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc < 2:128075/100‑1 (MQ=255) cTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc > 2:2902942/1‑100 (MQ=255) cTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTCGCAGGCTTTCGCGCAAACGGCGCAGGCCTTCAAc > 2:2846563/1‑100 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 1:3780312/100‑1 (MQ=255) ngCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc > 2:2189192/2‑99 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 1:49125/1‑100 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg < 1:830824/100‑1 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg > 2:3293959/1‑100 (MQ=255) ccTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGa > 1:206783/1‑100 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa < 2:2603904/100‑1 (MQ=255) tCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATc < 1:1707038/99‑1 (MQ=255) tCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCt > 1:1667088/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 2:1354226/1‑100 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 2:3327333/100‑1 (MQ=255) aCAGATCCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGTGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 2:617657/100‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa < 2:2976079/100‑1 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 1:3393899/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 2:1223899/1‑100 (MQ=255) tGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAacac > 2:2136648/1‑100 (MQ=255) tacttactCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTc > 1:2756415/1‑100 (MQ=255) ccgatctCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCa < 1:2809307/95‑1 (MQ=255) tactCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg < 1:3680287/100‑1 (MQ=255) actCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTTGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 1:3141069/100‑1 (MQ=255) actCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg > 1:1180311/1‑100 (MQ=255) actCGCGGAACAGCGCTTCGAGATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 2:3338913/100‑1 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 1:15334/1‑100 (MQ=255) tCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg > 2:866257/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCaagatcgg > 2:2809287/1‑93 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:20469/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa < 1:3616929/100‑1 (MQ=255) cgGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg > 1:1548643/1‑100 (MQ=255) gAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGcc > 1:2546212/1‑100 (MQ=255) gAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGcc > 2:3589778/1‑100 (MQ=255) aCAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCaa > 1:3111594/1‑100 (MQ=255) aGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt < 1:2040673/100‑1 (MQ=255) aGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt > 2:300470/1‑100 (MQ=255) gcgcTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt > 2:1840261/1‑100 (MQ=255) cgcTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCagatcg > 1:1040223/1‑95 (MQ=255) gcTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 2:517399/100‑1 (MQ=255) gcTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa > 1:950572/1‑100 (MQ=255) gcTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 2:1848500/100‑1 (MQ=255) gcTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa > 2:2527442/1‑100 (MQ=255) gcTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 1:1501651/100‑1 (MQ=255) cTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:1096882/100‑1 (MQ=255) cTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 2:1494296/100‑1 (MQ=255) cTTCGATATGCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCTGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:1647973/100‑1 (MQ=255) cGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc > 2:1718339/1‑100 (MQ=255) cGATATTCAG‑CC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 2:3813557/1‑100 (MQ=255) gATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAGACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc < 1:2677359/100‑1 (MQ=255) gATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 1:2385204/1‑100 (MQ=255) gATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACATGAATCTGGCGAACACGTTCACGGGTGCGGCCAATTTCACGAcc > 2:3533834/1‑100 (MQ=255) tataCAG‑CC‑ACTGCGTTTGCAGGATTTTGCGCAAACGGCGCAGGCCTTCAACCAGAATCTGGCGAACACGTTCACGGGTGAGGCCAATCTCACGACCTa < 2:792850/99‑1 (MQ=255) tatTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa < 2:3694552/100‑1 (MQ=255) tatTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa < 1:3162928/100‑1 (MQ=255) atTCAGCCC‑CCTGCCTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTAc > 2:3572321/1‑100 (MQ=255) ttCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 1:544199/1‑100 (MQ=255) ttCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 1:3221002/1‑100 (MQ=255) ttCAGCCC‑CCTGCGTCTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa < 1:3764137/100‑1 (MQ=255) | CATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑CC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866489‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |