| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,524,458:1 | +T | 15.0% | intergenic (+90/+23) | yncE → / ← ansP | ATP‑binding protein, periplasmic, function unknown/L‑asparagine transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,524,458 | 1 | . | T | 15.0% | 421.1 / 83.4 | 133 | intergenic (+90/+23) | yncE/ansP | ATP‑binding protein, periplasmic, function unknown/L‑asparagine transporter |
| Reads supporting (aligned to +/- strand): ref base . (72/41); new base T (12/8); total (84/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.94e-01 | |||||||||||
Only 100 of 136 total aligned reads displayed.
TGCGCTGTAATAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCTGTG > NC_000913/1524359‑1524555 | gcgcTGTAATAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑a > 1:2454388/1‑100 (MQ=255) cgcTGTAATAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑Ac > 2:435244/1‑100 (MQ=255) cTGTAATAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTCATCTGAATTTGCCCGGC‑CCGt > 2:2173147/1‑100 (MQ=255) gTAATAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAg > 2:1639346/1‑100 (MQ=255) gTAATAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAg > 1:3235363/1‑100 (MQ=255) tAATAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGc < 2:3741069/100‑1 (MQ=255) aTAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCg > 1:3719343/1‑100 (MQ=255) tAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCgg > 1:1703311/1‑100 (MQ=255) tAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCgg > 1:1943764/1‑100 (MQ=255) aGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCggg < 2:1368276/100‑1 (MQ=255) aGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCggg < 1:1674400/100‑1 (MQ=255) atatGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGCTACGT‑GCCGGGC‑a < 2:1460090/100‑1 (MQ=255) tatGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGCTACGT‑GCCGGGC‑aa < 2:1914584/100‑1 (MQ=255) tGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AAtt > 1:679050/1‑100 (MQ=255) tGGCGAGGGGGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGCTACGT‑GCCGGGC‑aaat < 2:1752321/100‑3 (MQ=255) ggCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AAttt > 1:1767264/1‑100 (MQ=255) gCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGCTACGT‑GCCGGGC‑AAattc < 1:1753191/100‑2 (MQ=38) cGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTg > 1:520998/1‑100 (MQ=255) cGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTg < 2:520992/100‑1 (MQ=255) cGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTg > 2:2734671/1‑100 (MQ=255) aGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGCTACGT‑GCCGGGC‑AAatt < 2:1692037/96‑1 (MQ=38) gggTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCaa > 2:1035589/1‑100 (MQ=255) ggTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAAt > 1:552324/1‑100 (MQ=255) gTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAAtt < 1:2674476/100‑1 (MQ=255) tGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTa > 1:3354506/1‑100 (MQ=255) gAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTaa > 2:121541/1‑100 (MQ=255) gAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTAGCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTaa > 2:2350232/1‑100 (MQ=255) acaaCGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAAc > 1:3534578/3‑100 (MQ=255) aaaaCGGTGAGACTTGCCTGCCTTTTATCGCGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTCCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAAc < 2:2298252/100‑1 (MQ=255) aaaaCGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAAc > 2:3435652/1‑100 (MQ=255) aCGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCg > 2:2624596/1‑100 (MQ=255) cGGTGAGACTTGCCTGCCTTTTAAAAAAGCGTATAAGGCACTTTCGTCAGTAATCTGAATTTACGCAGC‑ACGTACCCGGGC‑AAATTTGCAATTAAc > 2:1313504/1‑96 (MQ=255) ggTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGcc > 2:1100922/1‑100 (MQ=255) gaCTTGTCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTc > 1:3447163/1‑100 (MQ=255) gaCTTGCCTGCCTATTATCACGGCGTATCCGGCACTTTAGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTc > 2:2363269/1‑100 (MQ=255) ttGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAgg < 1:292295/100‑1 (MQ=255) ttGCCTGACTTTTATCACGCCGCATCCGGCACCTTCGTCAGTAGTCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAgg > 1:3206682/1‑100 (MQ=255) ttGCCTGACTTTTATCACGCCGCATCCGGCACCTTCGTCAGTAGTCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAgg > 1:1291285/1‑100 (MQ=255) tgcctgccTTTTATCACGGCGTATCCGGGACTTGCGTCAGTAATCTGAATTTGCTCGGC‑ACGTAGCCGGGC‑AATGTTGCAATTAACTCGCCGTTTCAGGc < 2:3233790/100‑1 (MQ=255) gcctgcctTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCt > 1:77137/1‑100 (MQ=255) cctgcctTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCtt > 1:897798/1‑100 (MQ=255) cctTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAac < 1:1944324/100‑1 (MQ=255) cctTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAac > 1:1133319/1‑100 (MQ=255) ctTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAaca < 2:1973911/100‑1 (MQ=255) ctTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAaca > 2:2702328/1‑100 (MQ=255) ttttATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAacac > 1:1076284/1‑100 (MQ=255) tATCACGGCGTATCCGGCACTTTCGTCAGCAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAAt < 2:2298874/100‑1 (MQ=255) aTCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAAtt > 2:3094419/1‑100 (MQ=255) aCGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCACTTAACTCGCCGTTTCAGGCTTAAACACCATTTcc > 1:2945295/1‑100 (MQ=255) aCGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTcc > 2:2105545/1‑100 (MQ=255) ggCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATCTCCTg > 2:2753387/1‑100 (MQ=255) gCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGt < 2:834315/100‑1 (MQ=255) gTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGtt < 2:1676815/99‑1 (MQ=255) tATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGtttt > 1:743302/1‑100 (MQ=255) ccGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTttct > 1:3091279/1‑100 (MQ=255) cGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTttctt > 1:1438859/1‑100 (MQ=255) cGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTttctt < 2:2207680/100‑1 (MQ=255) cGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTttctt > 1:869272/1‑100 (MQ=255) ggCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTttcttc > 2:2625915/1‑100 (MQ=255) gCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCa < 1:304090/100‑1 (MQ=255) gCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCa < 2:3458410/100‑1 (MQ=255) gCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCa < 1:3054724/100‑1 (MQ=255) cACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCAt < 2:18881/100‑1 (MQ=255) cACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCAt > 2:3658230/1‑100 (MQ=255) cTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCt < 1:3031146/100‑1 (MQ=255) tttCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCtt < 1:2122988/100‑1 (MQ=255) tttCGTCAGTAAGCTGAATTTGCCTGGA‑ACGTAGCCGGGC‑AATTTTTCTATTAACTCTCCGTTTCATGCTTAAACACAATTTCCTGTTTTTCTTCATCt < 2:3362696/99‑1 (MQ=255) ttCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGTGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTc > 2:1755709/1‑100 (MQ=255) cGTCAGTAATCTGAATTTGCCCGGC‑AAGTAGCCGGGA‑AATTTTGCTATTAACTCGCCGTTTCGGGCGTAAACAAAATATCCTGTTGTTATTCTTCTTACt > 2:3648514/1‑100 (MQ=255) gTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTc > 2:604545/1‑100 (MQ=255) gTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTc < 1:231560/100‑1 (MQ=255) gTCAGTAATCTGAATAAGCCCGGC‑ACGTAGCCGTAC‑AGTGTTGCAATTAACTCGCCCTTTCACGCTTAAACACCAGTTCCTTTTATTCTTCATATTCCt > 2:1590793/1‑99 (MQ=255) aGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTcgac < 1:2390859/100‑1 (MQ=255) gTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTcgacg > 2:2323112/1‑100 (MQ=255) gTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTcgacg < 2:1816554/100‑1 (MQ=255) aTCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACt > 1:231846/1‑100 (MQ=255) tCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTg > 1:876344/1‑100 (MQ=255) gcaaaattGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTgg > 1:152639/7‑100 (MQ=38) gcaaaattGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTgg > 1:3619189/7‑100 (MQ=38) tGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGATGACTGgc < 2:2969369/100‑1 (MQ=255) tGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGgc > 2:1371376/1‑100 (MQ=255) tGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGgc > 2:450037/1‑100 (MQ=255) gAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGgcg < 1:3049423/100‑1 (MQ=255) aaattGCCCGGCTACGT‑GCCGGGCAAATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGgcg > 2:3732738/4‑100 (MQ=37) aaTTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAAATCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGgcgc < 1:1032857/100‑1 (MQ=255) aattGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCa > 1:3774744/3‑100 (MQ=255) aTTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCa > 1:2000095/1‑100 (MQ=255) tttGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAg < 2:420406/100‑1 (MQ=255) tGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCCGTg > 2:744487/1‑100 (MQ=255) tGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAg > 2:870612/1‑98 (MQ=255) tGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTg > 2:3662378/1‑100 (MQ=255) tGCCCGGCTACGT‑GCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTg > 1:1820508/1‑100 (MQ=255) tGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTg > 2:1010774/1‑100 (MQ=255) gCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGc < 2:679043/100‑1 (MQ=255) cccGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGc > 2:2432337/1‑99 (MQ=255) cccGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCt > 2:517853/1‑100 (MQ=255) cccGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCt > 1:2228664/1‑100 (MQ=255) cccGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCt > 2:1532790/1‑100 (MQ=255) cGGC‑ACGTAGCCGTGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGTCTGGCGCAGTGCtgt < 2:681497/100‑1 (MQ=255) ggC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCtgtg > 1:1464733/1‑100 (MQ=255) | TGCGCTGTAATAGATATGGCGAGGGTGAAAACGGTGAGACTTGCCTGCCTTTTATCACGGCGTATCCGGCACTTTCGTCAGTAATCTGAATTTGCCCGGC‑ACGTAGCCGGGC‑AATTTTGCAATTAACTCGCCGTTTCAGGCTTAAACACAATTTCCTGTTTTTCTTCATCTTCCTCGACGACTGGCGCAGTGCTGTG > NC_000913/1524359‑1524555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |