| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3539757 = | NA (NA) | 14 (0.110) | 6/160 | NT | NA | noncoding (12/34 nt) | REP252 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP252 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 3539792 = | NA (NA) | intergenic (+86/‑371) | yhgF/feoA | putative transcriptional accessory protein/ferrous iron transporter, protein A | |||||
Only 100 of 223 total aligned reads displayed.
GCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGAA > NC_000913/3539693‑3539891 | gCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTg > 1:3688488/1‑100 (MQ=255) cAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGc > 1:1382939/1‑100 (MQ=255) atattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTg > 1:2136777‑M1/65‑100 (MQ=255) atattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTg > 1:408903‑M1/65‑100 (MQ=255) caaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCGCGAACTCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGcc < 2:951837/99‑1 (MQ=255) aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGcc > 2:2257034/1‑100 (MQ=255) aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGcc < 1:3462493/100‑1 (MQ=255) aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGcc > 1:1584872/1‑100 (MQ=255) aaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGa < 1:3248951/100‑1 (MQ=255) aaaCGTTAAACGCCCGTACGGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGa < 2:3365044/100‑1 (MQ=255) cGTTAAACGCCCGTACTGGCATACGGGTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAAAGCCTTGCCTGACAt > 2:570842/1‑100 (MQ=255) gTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATa > 2:110930/1‑100 (MQ=255) gTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATa > 1:1425731/1‑100 (MQ=255) gTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATa > 1:2263389/1‑100 (MQ=255) ttAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATaa < 1:2455115/100‑1 (MQ=255) aaaCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATaaaa < 1:2477151/100‑1 (MQ=255) aaaCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATaaaa > 1:385372/1‑100 (MQ=255) aaCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAg < 2:3753341/100‑1 (MQ=255) gCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGc < 2:3771927/100‑1 (MQ=255) cGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCgg < 1:3131876/100‑1 (MQ=255) gTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGga < 2:1151363/100‑1 (MQ=255) cTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGaa < 1:3574765/100‑1 (MQ=255) ggCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAata > 1:1991624/1‑100 (MQ=255) ggCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAata > 2:3508187/1‑100 (MQ=255) cGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGTACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCg < 2:1677258/100‑1 (MQ=255) ggTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGTCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCgg < 2:2385204/100‑1 (MQ=255) gTTCGAATTTACACAAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCCGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGc < 1:2356705/100‑1 (MQ=255) ttCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCg > 2:3215756/1‑97 (MQ=255) tCGAATTTGCACGAAATCGTA‑GGGCAGATAATGCGGTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAACGTGCCGGAG‑ATATTCTCCGGCaa < 2:1703411/100‑2 (MQ=37) tCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAATGCCGGAGATAT‑TCTCCGGc < 2:1470352/98‑1 (MQ=37) ngAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCAtt > 1:1025819/2‑100 (MQ=255) cGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCAtt > 2:3482155/1‑100 (MQ=255) gAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCAttt > 1:1683636/1‑100 (MQ=255) aaTTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCAtttt < 1:1099291/100‑1 (MQ=255) tttGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTa > 1:906209/1‑100 (MQ=255) tGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAATGCCGGAG‑ATATTCTCCGGCACTTTTAtg < 1:1226880/100‑2 (MQ=25) gCACGAAATCGTAGGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAATGCCGGAG‑ATATTCTCCGGCACTTTTAtg < 2:518759/100‑2 (MQ=25) gCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTc < 2:1410004/100‑1 (MQ=255) gCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTc < 1:1132679/100‑1 (MQ=255) gCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTc < 1:239559/100‑1 (MQ=255) gCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAATGCCGGAGATGT‑TCTCCGGCACTTTTAtgt < 1:1232713/100‑3 (MQ=37) cACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTcc < 2:1584862/100‑1 (MQ=255) cACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTcc < 2:2628956/100‑1 (MQ=255) cACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAATGCCGGAG‑ATATTCTCCGGCACTTTTAtgtc < 2:3078477/100‑4 (MQ=25) aCGAAATGGTA‑GGGCAGATAAGGCGGTCACGCCGCATCGGGCAACGAACGCCTTGCCTGACATAAAAATGCCGGAGATAT‑TCTCCGGCACTTTTAtgtca < 2:2424635/100‑5 (MQ=21) aCGAAATCGTA‑AGGCAGATAAGGCGTTCCCGCCGCATCTAGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TTTCCGGCCTTTTTATTcc > 2:456634/1‑99 (MQ=255) aaaTCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAg < 2:2846705/100‑1 (MQ=255) aaaTCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAg < 1:578920/100‑1 (MQ=255) tCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCa < 1:1718921/100‑1 (MQ=255) tA‑GTGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTGCGGCATTTTTATTCCACAGCCAAAc < 2:1296423/100‑1 (MQ=255) tA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAAc < 1:292943/100‑1 (MQ=255) a‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACt > 1:2371860/1‑100 (MQ=255) a‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACt > 1:2145280/1‑100 (MQ=255) atgtcaggcaaggcgttcgttgccagatgcggcgtgaacgccttGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACt > 1:290199‑M2/45‑100 (MQ=255) gggCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTc > 1:3508176/1‑100 (MQ=255) gggCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTc < 2:3674929/100‑1 (MQ=255) gggCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTc > 1:130309/1‑100 (MQ=255) gCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCat > 1:827479/1‑100 (MQ=255) cAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCata < 2:3609453/100‑1 (MQ=255) gatgcGGCGTGAACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGCCATTTTTATTCCACAGCCAAACTCataat < 2:1964123‑M1/95‑1 (MQ=255) caaggcgttcgttgccagatgcggcgtgaacgccttGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAatat > 2:3531257‑M2/37‑100 (MQ=255) aaggcgttcgttgccagatgcggcgtgaacgccttGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAatata > 1:2074988‑M2/36‑100 (MQ=255) GGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATAtt < 1:1549100‑M1/100‑1 (MQ=255) gcgttcgttgccagatgcggcgtgaacgccttGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTc > 2:3702263‑M2/33‑100 (MQ=255) cgttcgttgccagatgcggcgtgaacgccttGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTcc > 2:860940‑M2/32‑100 (MQ=255) cGTTCACGCCGCATCTGACAACGAAAGCCTTGCCTAACATAAAAGTGCCGGAGGATA‑ATTCCGGGATTTTAACTCAACAGCCAAACTAATAATATATTc > 2:1621332/1‑99 (MQ=255) CGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTcc < 2:1523999‑M1/100‑1 (MQ=255) TTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCgg > 1:416606‑M1/1‑100 (MQ=255) TTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCgg > 1:1396995‑M1/1‑100 (MQ=255) TTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCgg > 2:818897‑M1/1‑100 (MQ=255) TTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCgg > 1:299381‑M1/1‑100 (MQ=255) TTCACGCCGCATCTGGCAACGAACGCCGTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCgg > 1:1489403‑M1/1‑100 (MQ=255) TCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCcggt > 1:1317218‑M1/1‑99 (MQ=255) TCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGc < 1:1820003‑M1/100‑1 (MQ=255) CACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCa < 1:2632589‑M1/100‑1 (MQ=255) aCGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCaa > 1:2787445/1‑100 (MQ=255) cgcATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAatat > 2:1845221/1‑99 (MQ=255) aTCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAt > 1:1274735/1‑100 (MQ=255) tCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtc < 2:893609/100‑1 (MQ=255) tCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtc < 1:2541325/100‑1 (MQ=255) gtGGCAAGGACGGCCTTGCCTGACATAAAAGTGCCGGCGGATA‑TGCCCGGCATTTTTATTCGACAGCGAAAGCAATAGCATATTCGGGCAAGAtata > 2:61710/2‑97 (MQ=255) cTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtca > 1:2096539/1‑100 (MQ=255) tGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCCTTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcat > 2:1547997/1‑100 (MQ=255) tGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcat > 1:2306664/1‑100 (MQ=255) ggCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcatt > 1:3091192/1‑100 (MQ=255) ggCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcatt > 1:1798062/1‑100 (MQ=255) ggCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcatt > 1:3645168/1‑100 (MQ=255) ggCAACGAACGCCATGCCTGACATAAAAGTGACGGAGAATA‑TATCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcatt > 1:2573429/1‑100 (MQ=255) gCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcattt > 2:400067/1‑100 (MQ=255) aacgaacgCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcatttca < 1:731633/100‑1 (MQ=255) gtgaacgccttGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcatttcat < 1:860949‑M2/89‑1 (MQ=255) cgaacgCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcatttcatt < 1:2725152/100‑1 (MQ=255) cgaacgCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcatttcatt > 1:347476/1‑100 (MQ=255) cgaacgCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcatttcatt < 1:63953/100‑1 (MQ=255) cgaacgCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcatttcatt > 1:2463899/1‑100 (MQ=255) gaacgccttGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTa < 2:262335‑M2/91‑1 (MQ=255) acgccttGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTaac < 1:3116271‑M2/93‑1 (MQ=255) cgccttGCCTGACATAAAAGTGCCTGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTaa < 2:2782523‑M2/92‑1 (MQ=255) tGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAACATATTTCGGCAATAGTTATCATTTCATTAACAACTGa > 2:2578237‑M2/2‑100 (MQ=255) gCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGaa > 1:3199722/1‑100 (MQ=255) | GCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTA‑GGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATA‑TCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGAA > NC_000913/3539693‑3539891 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |