| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,655,922 | C→T | 16.2% | intergenic (‑20/+44) | yhiD ← / ← hdeB | putative Mg(2+) transport ATPase, inner membrane protein/acid‑resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,655,922 | 0 | C | T | 16.2% | 449.3 / 61.7 | 178 | intergenic (‑20/+44) | yhiD/hdeB | putative Mg(2+) transport ATPase, inner membrane protein/acid‑resistance protein |
| Reads supporting (aligned to +/- strand): ref base C (77/72); new base T (15/14); total (92/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.88e-01 | |||||||||||
Only 100 of 187 total aligned reads displayed.
CCGCGCATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACAAATTTTTCTGC > NC_000913/3655823‑3656020 | ccGCGCATTTGCCTTTCCATACCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGagc > 2:2340344/1‑100 (MQ=255) cgcgCATTTGCCTTTCCATGCCAATGGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGagca > 2:1462574/1‑100 (MQ=255) cgcgCATTTGCCTTTCCATACCAATAGCGCCACAGGCAATTGCCGCGAGTATAATACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGagc < 2:765294/99‑1 (MQ=255) gcgcATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGagcag > 2:884082/1‑100 (MQ=255) cgcATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGagcagc < 1:2021313/100‑1 (MQ=255) gcATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAgcagca > 2:3010881/1‑100 (MQ=255) tGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATg < 1:1993321/100‑1 (MQ=255) gCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATg‑g > 1:202838/1‑100 (MQ=255) cTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGTAGCAGCAAGATG‑GCt > 1:3757890/1‑100 (MQ=255) cTTTCCATGCAAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAAAAAAAAAAGGAGCAGCAAGATG‑Gc < 2:198662/99‑1 (MQ=255) tttCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTc < 1:2802250/100‑1 (MQ=255) ccATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAAc > 1:1539154/1‑100 (MQ=255) cATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACt > 1:2090167/1‑100 (MQ=255) cATGCAAATAGCGCCACTGTCAATTGCCGCGAGTATAATACGTATAATAAATTCTGCTGTCAAAAAAAAAAAAAAAAAGGAGCAGCAAGATG‑GCTCAACt < 2:395200/100‑1 (MQ=255) aTGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACtt < 1:597159/100‑1 (MQ=255) ccAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCt < 2:996310/100‑1 (MQ=255) ccAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCt < 1:1530793/100‑1 (MQ=255) cAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCt < 2:3333587/99‑1 (MQ=255) aaTAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCAAAAAAAAAAAAAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCt < 2:2690147/98‑1 (MQ=255) gcaacaGGCAATTGCCGTGAGTATAAGATGTATAATAAATTCTGCTGTTATAAAAAAAAAAAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCttt < 2:1431764/97‑1 (MQ=255) gcCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCttt > 1:781185/1‑100 (MQ=255) gcCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCttt > 1:1131642/1‑100 (MQ=255) gcCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAACATG‑GCTCAACTTGCTACTc > 2:1889628/1‑96 (MQ=255) ccACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCtttt < 1:2492719/100‑1 (MQ=255) cacaGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGTAGCAAGTTGAGC‑CATCTTGCTGCTCCttttt < 1:332756/100‑1 (MQ=21) cacaGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCttttt < 1:50838/100‑1 (MQ=255) acaGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTa > 1:1288996/1‑100 (MQ=255) acaGCCAAGTCCCGCAAGGAGAATACTTATAATAAATTCTTCTGTCATATAAAAATGCAAAAAGGAGTAGCAAGTTG‑AGCCATCTTGCTGCTCCtttttg < 1:1651830/100‑2 (MQ=2) caGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGTAGCAAGTTGAGC‑CATCTTGCTGCTCCtttttgc < 1:942026/100‑3 (MQ=18) aGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGTAGCAAGTTGAGC‑CATCTTGCTGCTCCtttttgca < 2:2923880/100‑4 (MQ=18) aGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGTAGCAAGTTGAGC‑CATCTTGCTGCTCCtttttgca < 2:195499/100‑4 (MQ=18) aGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGTAGCAAGTTG‑AGCCATCTTGCTGCTCCtttttgca < 1:310429/100‑4 (MQ=21) aGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACt > 1:1696796/1‑100 (MQ=255) aGGCAATTGCCAAAAGAATAAGACGTATAATAAAGGCTGCTGGCATATACAAAGGCAAAAATTAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTAc < 2:3062446/99‑1 (MQ=255) ggCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACtt > 2:2943627/1‑100 (MQ=255) gaaaTTGCCGCGAGTAAAAGACGTATAAGAAATTCTGCTGTCATATAAAAATGGCAAAAGGAGTAGCAAGTTG‑AGCCATCTTGCTGCTCCcttttgca < 2:1869235/96‑4 (MQ=12) gCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTg < 1:3298301/100‑1 (MQ=255) gCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTg < 1:30870/100‑1 (MQ=255) aTTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCAc < 2:2102910/100‑1 (MQ=255) aTTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCAc < 1:661125/100‑1 (MQ=255) gCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGc < 2:2378993/95‑1 (MQ=255) gCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCt < 1:1203842/99‑1 (MQ=255) gCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTc > 2:2188887/1‑100 (MQ=255) gCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTc > 2:3477860/1‑100 (MQ=255) ccGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCa > 1:2425776/1‑100 (MQ=255) cgcgAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCAt > 1:2115540/1‑100 (MQ=255) cgcgAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCAt > 1:674267/1‑100 (MQ=255) cgcgAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCAt > 1:2273900/1‑100 (MQ=255) cgcgAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCAt > 2:1375218/1‑100 (MQ=255) cgAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTa < 1:450972/100‑1 (MQ=255) cgAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTa < 1:290038/100‑1 (MQ=255) aGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAAt > 1:321346/1‑100 (MQ=255) gTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAAtt < 1:2650301/100‑1 (MQ=255) tataAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTc < 2:545455/100‑1 (MQ=255) ataAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAAGAGCAGCAAGAGG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCg > 2:2440681/1‑100 (MQ=255) ataAGACGTATAATAAATTCGGCTGTCATACAAAAATGCAAAAAGGATCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTc < 2:2425850/99‑1 (MQ=255) aaGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGc < 1:1074838/100‑1 (MQ=255) aaGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGc < 1:3384188/100‑1 (MQ=255) aGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGc > 1:65572/1‑99 (MQ=255) aGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCa > 2:1214863/1‑100 (MQ=255) aGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCa < 1:1023807/100‑1 (MQ=255) gACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCaa > 1:2827008/1‑100 (MQ=255) gTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTc > 1:1930578/1‑100 (MQ=255) ataataAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCAt > 1:495142/1‑100 (MQ=255) aataaATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTa > 1:2360052/1‑100 (MQ=255) aataaATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTa > 2:2289750/1‑100 (MQ=255) ataaATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAg > 2:2754856/1‑100 (MQ=255) ataaATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTACACCTCATTAATTCGGCAAGTCATTAg > 1:555058/1‑100 (MQ=255) aaaTTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGAt > 1:2921311/1‑100 (MQ=255) aTTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGc > 1:1109828/1‑100 (MQ=255) tgctgTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGa < 2:1971221/100‑1 (MQ=255) ctgTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGAtt > 1:3483698/1‑100 (MQ=255) ctgTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGAtt > 2:3449983/1‑100 (MQ=255) gTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGAtttt < 2:1089479/100‑1 (MQ=255) cATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTCATTTTTg > 2:1061881/1‑100 (MQ=255) atatAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGa > 1:2201682/1‑100 (MQ=255) tataAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGaa > 2:3472537/1‑100 (MQ=255) tataAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGaa > 1:2619984/1‑100 (MQ=255) tataAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGaa > 2:1699348/1‑100 (MQ=255) ataAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAATTTGCTACTCCTTTTTACTTTCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAg < 2:3236724/100‑1 (MQ=255) ataAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAg < 1:2993519/100‑1 (MQ=255) taAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAgg < 1:643152/100‑1 (MQ=255) taAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAgg > 2:2325631/1‑100 (MQ=255) taAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAgg < 1:2387654/100‑1 (MQ=255) taAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAgg < 2:3102475/100‑1 (MQ=255) taAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAgg < 1:692797/100‑1 (MQ=255) gtgcaagtaaaaaGGAGTAGCAAGTTG‑AGCCATCTTGCTGCTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGt > 2:2269509/9‑100 (MQ=17) aaaaTGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGta > 2:3561499/1‑100 (MQ=255) aagtaaaaaGGAGTAGCAAGTTGAGC‑CATCTTGCTGCTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATAc > 1:34539/5‑100 (MQ=18) tGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACa < 2:1926192/100‑1 (MQ=255) agtaaaaaGGAGTAGCAAGTTGAGC‑CATCTTGCTGCTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACa > 1:1463584/4‑100 (MQ=18) gtaaaaaGGAGTAGCAAGTTG‑AGCCATCTTGCTGCTCCTTTTTGCTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACaa > 2:1436380/3‑100 (MQ=18) gtaaaaaGGAGTAGCAAGTTG‑AGCCATCTTGCTGCTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTTAAGGTATACa > 2:1814158/3‑99 (MQ=18) gCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACaa > 2:1180000/1‑100 (MQ=255) taaaaaGGAGTAGCAAGTTG‑AGTCATCTTGCTGCTCCTTTTTACTTGAACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTAGAAGGTATACaa > 1:3186363/2‑99 (MQ=18) aaaaGGAGTAGCAAGTTGAGC‑CATCTTGCTGCTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACagatc > 1:99838/1‑96 (MQ=18) aaaaGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACAAAtt > 1:868589/1‑100 (MQ=255) ggAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACAAATTTTTc < 2:2619965/100‑1 (MQ=255) gAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCAGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACAAATTTTTCt < 2:1284254/100‑1 (MQ=255) agcagcAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACAAATTTTTCTg < 1:3411477/100‑1 (MQ=255) | CCGCGCATTTGCCTTTCCATGCCAATAGCGCCACAGGCAATTGCCGCGAGTATAAGACGTATAATAAATTCTGCTGTCATATAAAAATGCAAAAAGGAGCAGCAAGATG‑GCTCAACTTGCTACTCCTTTTTACTTGCACCTCATTAATTCGGCAAGTCATTAGATGCTTGATTTTTGAAGGTATACAAATTTTTCTGC > NC_000913/3655823‑3656020 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |